RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 KREMEN2Q8NCW0 462 aa15.72■□□□□ 0.11
LIG1-206ENST00000594067 SLC5A11Q8WWX8 675 aa15.72■□□□□ 0.11
LIG1-206ENST00000594067 IL4I1Q96RQ9 567 aa15.72■□□□□ 0.11
LIG1-206ENST00000594067 NFKBIL1Q9UBC1 381 aaPredicted RBP15.72■□□□□ 0.11
LIG1-206ENST00000594067 MAFFQ9ULX9 164 aa15.72■□□□□ 0.11
LIG1-206ENST00000594067 EFCAB10A6NFE3 127 aa15.72■□□□□ 0.11
LIG1-206ENST00000594067 A8MVJ9 347 aa15.72■□□□□ 0.11
LIG1-206ENST00000594067 ARHGAP33O14559 1287 aa15.72■□□□□ 0.11
LIG1-206ENST00000594067 PLXNA2O75051 1894 aa15.72■□□□□ 0.11
LIG1-206ENST00000594067 GPX5O75715 221 aa15.72■□□□□ 0.11
LIG1-206ENST00000594067 IFNW1P05000 195 aa15.72■□□□□ 0.11
LIG1-206ENST00000594067 TIE1P35590 1138 aa15.72■□□□□ 0.11
LIG1-206ENST00000594067 MMP12P39900 470 aa15.72■□□□□ 0.11
LIG1-206ENST00000594067 DSTNP60981 165 aa15.72■□□□□ 0.11
LIG1-206ENST00000594067 TAP2Q03519 686 aa15.72■□□□□ 0.11
LIG1-206ENST00000594067 TEAD2Q15562 447 aa15.72■□□□□ 0.11
LIG1-206ENST00000594067 SSX1Q16384 188 aa15.72■□□□□ 0.11
LIG1-206ENST00000594067 NXPE4Q6UWF7 544 aa15.72■□□□□ 0.11
LIG1-206ENST00000594067 TMC5Q6UXY8 1006 aa15.72■□□□□ 0.11
LIG1-206ENST00000594067 TRMT11Q7Z4G4 463 aaKnown RBP15.72■□□□□ 0.11
LIG1-206ENST00000594067 OR8H2Q8N162 312 aa15.72■□□□□ 0.11
LIG1-206ENST00000594067 CEP19Q96LK0 163 aa15.72■□□□□ 0.11
LIG1-206ENST00000594067 MAPKAP1Q9BPZ7 522 aa15.72■□□□□ 0.11
LIG1-206ENST00000594067 SGPP1Q9BX95 441 aa15.72■□□□□ 0.11
LIG1-206ENST00000594067 OR2AG1Q9H205 316 aa15.72■□□□□ 0.11
LIG1-206ENST00000594067 CXorf36Q9H7Y0 433 aa15.72■□□□□ 0.11
LIG1-206ENST00000594067 MIEF1Q9NQG6 463 aa15.72■□□□□ 0.11
LIG1-206ENST00000594067 DDX28Q9NUL7 540 aaKnown RBP15.72■□□□□ 0.11
LIG1-206ENST00000594067 CLN6Q9NWW5 311 aa15.72■□□□□ 0.11
LIG1-206ENST00000594067 MUTYHQ9UIF7 546 aa15.72■□□□□ 0.11
LIG1-206ENST00000594067 ZAR1LA6NP61 321 aa15.71■□□□□ 0.11
LIG1-206ENST00000594067 K7ESM1 405 aa15.71■□□□□ 0.11
LIG1-206ENST00000594067 SRPRAP08240 638 aaKnown RBP15.71■□□□□ 0.11
LIG1-206ENST00000594067 IGFBP1P08833 259 aaPredicted RBP15.71■□□□□ 0.11
LIG1-206ENST00000594067 SYN1P17600 705 aa15.71■□□□□ 0.11
LIG1-206ENST00000594067 RHCEP18577 417 aa15.71■□□□□ 0.11
LIG1-206ENST00000594067 FEN1P39748 380 aaKnown RBP15.71■□□□□ 0.11
LIG1-206ENST00000594067 LIM2P55344 173 aa15.71■□□□□ 0.11
LIG1-206ENST00000594067 RACK1P63244 317 aaKnown RBP15.71■□□□□ 0.11
LIG1-206ENST00000594067 TLE2Q04725 743 aa15.71■□□□□ 0.11
LIG1-206ENST00000594067 PUM1Q14671 1186 aaKnown RBP eCLIP15.71■□□□□ 0.111e-7■□□□□ 10.4
LIG1-206ENST00000594067 TIMM50Q3ZCQ8 353 aa15.71■□□□□ 0.11
LIG1-206ENST00000594067 FLCNQ8NFG4 579 aa15.71■□□□□ 0.11
LIG1-206ENST00000594067 VN1R2Q8NFZ6 395 aa15.71■□□□□ 0.11
LIG1-206ENST00000594067 OR9A1PQ8NGU1 263 aa15.71■□□□□ 0.11
LIG1-206ENST00000594067 C9orf43Q8TAL5 461 aaPredicted RBP15.71■□□□□ 0.11
LIG1-206ENST00000594067 IL17FQ96PD4 163 aa15.71■□□□□ 0.11
LIG1-206ENST00000594067 DEFB118Q96PH6 123 aa15.71■□□□□ 0.11
LIG1-206ENST00000594067 RC3H2Q9HBD1 1191 aaKnown RBP15.71■□□□□ 0.11
LIG1-206ENST00000594067 TAAR2Q9P1P5 351 aa15.71■□□□□ 0.11
LIG1-206ENST00000594067 GRIP1Q9Y3R0 1128 aa15.71■□□□□ 0.11
LIG1-206ENST00000594067 DENND4CQ5VZ89 1909 aa15.71■□□□□ 0.11
LIG1-206ENST00000594067 TRBV4-1A0A0J9YWV2 114 aa15.71■□□□□ 0.11
LIG1-206ENST00000594067 TSPAN11A1L157 253 aa15.71■□□□□ 0.11
LIG1-206ENST00000594067 CCRL2O00421 344 aa15.71■□□□□ 0.11
LIG1-206ENST00000594067 FFAR1O14842 300 aa15.71■□□□□ 0.11
LIG1-206ENST00000594067 UGT2B17O75795 530 aa15.71■□□□□ 0.11
LIG1-206ENST00000594067 SLITRK5O94991 958 aa15.71■□□□□ 0.11
LIG1-206ENST00000594067 RPL3P39023 403 aaKnown RBP15.71■□□□□ 0.11
LIG1-206ENST00000594067 NNMTP40261 264 aa15.71■□□□□ 0.11
LIG1-206ENST00000594067 RFX2P48378 723 aa15.71■□□□□ 0.11
LIG1-206ENST00000594067 METAP1P53582 386 aa15.71■□□□□ 0.11
LIG1-206ENST00000594067 TNFAIP8L2Q6P589 184 aaPredicted RBP15.71■□□□□ 0.11
LIG1-206ENST00000594067 PARS2Q7L3T8 475 aaKnown RBP15.71■□□□□ 0.11
LIG1-206ENST00000594067 CACTIN-AS1Q8N1I8 211 aa15.71■□□□□ 0.11
LIG1-206ENST00000594067 ASCC1Q8N9N2 400 aaKnown RBP15.71■□□□□ 0.11
LIG1-206ENST00000594067 TMCO6Q96DC7 493 aa15.71■□□□□ 0.11
LIG1-206ENST00000594067 WDR34Q96EX3 536 aa15.71■□□□□ 0.11
LIG1-206ENST00000594067 TAPBPLQ9BX59 468 aa15.71■□□□□ 0.11
LIG1-206ENST00000594067 ZBP1Q9H171 429 aa15.71■□□□□ 0.11
LIG1-206ENST00000594067 TBC1D14Q9P2M4 693 aa15.71■□□□□ 0.11
LIG1-206ENST00000594067 CRNNQ9UBG3 495 aaPredicted RBP15.71■□□□□ 0.11
LIG1-206ENST00000594067 PLAGL1Q9UM63 463 aa15.71■□□□□ 0.11
LIG1-206ENST00000594067 WNT6Q9Y6F9 365 aa15.71■□□□□ 0.11
LIG1-206ENST00000594067 HELZP42694 1942 aaKnown RBP15.71■□□□□ 0.11
LIG1-206ENST00000594067 ALPK3Q96L96 1907 aa15.71■□□□□ 0.11
LIG1-206ENST00000594067 ENTPD6O75354 484 aa15.71■□□□□ 0.1
LIG1-206ENST00000594067 SOX14O95416 240 aa15.71■□□□□ 0.1
LIG1-206ENST00000594067 IRS1P35568 1242 aa15.71■□□□□ 0.1
LIG1-206ENST00000594067 MAPK9P45984 424 aa15.71■□□□□ 0.1
LIG1-206ENST00000594067 CAMK2BQ13554 666 aa15.71■□□□□ 0.1
LIG1-206ENST00000594067 ZNF658BQ4V348 819 aaPredicted RBP15.71■□□□□ 0.1
LIG1-206ENST00000594067 CEACAM20Q6UY09 585 aa15.71■□□□□ 0.1
LIG1-206ENST00000594067 ST13P5Q8NFI4 369 aaPredicted RBP15.71■□□□□ 0.1
LIG1-206ENST00000594067 SETD6Q8TBK2 473 aa15.71■□□□□ 0.1
LIG1-206ENST00000594067 TRNT1Q96Q11 434 aaKnown RBP15.71■□□□□ 0.1
LIG1-206ENST00000594067 ACAT2Q9BWD1 397 aa15.71■□□□□ 0.1
LIG1-206ENST00000594067 NLNQ9BYT8 704 aa15.71■□□□□ 0.1
LIG1-206ENST00000594067 C3orf14Q9HBI5 128 aa15.71■□□□□ 0.1
LIG1-206ENST00000594067 PCDHGB2Q9Y5G2 931 aa15.71■□□□□ 0.1
LIG1-206ENST00000594067 A8MV72 311 aaPredicted RBP15.7■□□□□ 0.1
LIG1-206ENST00000594067 KPNA3O00505 521 aaPredicted RBP15.7■□□□□ 0.1
LIG1-206ENST00000594067 CYP7B1O75881 506 aa15.7■□□□□ 0.1
LIG1-206ENST00000594067 CKMT1AP12532 417 aa15.7■□□□□ 0.1
LIG1-206ENST00000594067 CD72P21854 359 aa15.7■□□□□ 0.1
LIG1-206ENST00000594067 DDOSTP39656 456 aa15.7■□□□□ 0.1
LIG1-206ENST00000594067 TRIM60Q495X7 471 aa15.7■□□□□ 0.1
LIG1-206ENST00000594067 ZFP69Q49AA0 526 aa15.7■□□□□ 0.1
LIG1-206ENST00000594067 ZMAT1Q5H9K5 638 aa15.7■□□□□ 0.1
LIG1-206ENST00000594067 PLAG1Q6DJT9 500 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms