RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 DEFB110Q30KQ9 67 aa12.74□□□□□ -0.37
VMP1-217ENST00000593168 ZNF385BQ569K4 471 aa12.74□□□□□ -0.37
VMP1-217ENST00000593168 C6orf10Q5SRN2 563 aa12.74□□□□□ -0.37
VMP1-217ENST00000593168 TMTC4Q5T4D3 741 aa12.74□□□□□ -0.37
VMP1-217ENST00000593168 GARNL3Q5VVW2 1013 aa12.74□□□□□ -0.37
VMP1-217ENST00000593168 NIPAL1Q6NVV3 410 aa12.74□□□□□ -0.37
VMP1-217ENST00000593168 ZNF605Q86T29 641 aa12.74□□□□□ -0.37
VMP1-217ENST00000593168 TICAM1Q8IUC6 712 aa12.74□□□□□ -0.37
VMP1-217ENST00000593168 SLC15A3Q8IY34 581 aa12.74□□□□□ -0.37
VMP1-217ENST00000593168 D2HGDHQ8N465 521 aa12.74□□□□□ -0.37
VMP1-217ENST00000593168 ARHGEF39Q8N4T4 335 aa12.74□□□□□ -0.37
VMP1-217ENST00000593168 FAM47BQ8NA70 645 aa12.74□□□□□ -0.37
VMP1-217ENST00000593168 LSM14AQ8ND56 463 aaKnown RBP12.74□□□□□ -0.37
VMP1-217ENST00000593168 FAM13CQ8NE31 585 aa12.74□□□□□ -0.37
VMP1-217ENST00000593168 IFI44Q8TCB0 444 aa12.74□□□□□ -0.37
VMP1-217ENST00000593168 CLPTM1LQ96KA5 538 aa12.74□□□□□ -0.37
VMP1-217ENST00000593168 CCDC115Q96NT0 180 aa12.74□□□□□ -0.37
VMP1-217ENST00000593168 ANKRD27Q96NW4 1050 aa12.74□□□□□ -0.37
VMP1-217ENST00000593168 CGREF1Q99674 301 aa12.74□□□□□ -0.37
VMP1-217ENST00000593168 NRSN2Q9GZP1 204 aa12.74□□□□□ -0.37
VMP1-217ENST00000593168 PAIP1Q9H074 479 aaKnown RBP12.74□□□□□ -0.37
VMP1-217ENST00000593168 ZMYND15Q9H091 742 aa12.74□□□□□ -0.37
VMP1-217ENST00000593168 ZNF768Q9H5H4 540 aaKnown RBP12.74□□□□□ -0.37
VMP1-217ENST00000593168 SOHLH2Q9NX45 425 aa12.74□□□□□ -0.37
VMP1-217ENST00000593168 ADA2Q9NZK5 511 aa12.74□□□□□ -0.37
VMP1-217ENST00000593168 SLC7A8Q9UHI5 535 aa12.74□□□□□ -0.37
VMP1-217ENST00000593168 PHF11Q9UIL8 331 aa12.74□□□□□ -0.37
VMP1-217ENST00000593168 PCDHA9Q9Y5H5 950 aa12.74□□□□□ -0.37
VMP1-217ENST00000593168 CROCCQ5TZA2 2017 aa12.73□□□□□ -0.37
VMP1-217ENST00000593168 TRBV5-3A0A0A0MS03 114 aa12.73□□□□□ -0.37
VMP1-217ENST00000593168 A0A1W2PR48 441 aa12.73□□□□□ -0.37
VMP1-217ENST00000593168 C1orf226A1L170 272 aa12.73□□□□□ -0.37
VMP1-217ENST00000593168 FITM1A5D6W6 292 aa12.73□□□□□ -0.37
VMP1-217ENST00000593168 CYSRT1A8MQ03 144 aa12.73□□□□□ -0.37
VMP1-217ENST00000593168 RFXANKO14593 260 aa12.73□□□□□ -0.37
VMP1-217ENST00000593168 RRP8O43159 456 aaKnown RBP12.73□□□□□ -0.37
VMP1-217ENST00000593168 PROM1O43490 865 aa12.73□□□□□ -0.37
VMP1-217ENST00000593168 GALR3O60755 368 aaPredicted RBP12.73□□□□□ -0.37
VMP1-217ENST00000593168 CIB2O75838 187 aa12.73□□□□□ -0.37
VMP1-217ENST00000593168 RPLP0P05388 317 aaKnown RBP12.73□□□□□ -0.37
VMP1-217ENST00000593168 ANKRD34CP0C6C1 535 aa12.73□□□□□ -0.37
VMP1-217ENST00000593168 ZCCHC18P0CG32 403 aa12.73□□□□□ -0.37
VMP1-217ENST00000593168 CKMT2P17540 419 aa12.73□□□□□ -0.37
VMP1-217ENST00000593168 NELFEP18615 380 aaKnown RBP12.73□□□□□ -0.37
VMP1-217ENST00000593168 ME2P23368 584 aa12.73□□□□□ -0.37
VMP1-217ENST00000593168 CERS1P27544 350 aa12.73□□□□□ -0.37
VMP1-217ENST00000593168 PTPN6P29350 595 aa12.73□□□□□ -0.37
VMP1-217ENST00000593168 SLC7A2P52569 658 aa12.73□□□□□ -0.37
VMP1-217ENST00000593168 CEACAM7Q14002 265 aa12.73□□□□□ -0.37
VMP1-217ENST00000593168 FAM53BQ14153 422 aa12.73□□□□□ -0.37
VMP1-217ENST00000593168 CAPRIN1Q14444 709 aaKnown RBP12.73□□□□□ -0.37
VMP1-217ENST00000593168 DEFB134Q4QY38 66 aa12.73□□□□□ -0.37
VMP1-217ENST00000593168 RUNDC3AQ59EK9 446 aa12.73□□□□□ -0.37
VMP1-217ENST00000593168 SAMD4BQ5PRF9 694 aaKnown RBP12.73□□□□□ -0.37
VMP1-217ENST00000593168 ANKRD26P1Q6NSI1 321 aa12.73□□□□□ -0.37
VMP1-217ENST00000593168 NANOGP8Q6NSW7 305 aa12.73□□□□□ -0.37
VMP1-217ENST00000593168 ZNF574Q6ZN55 896 aaPredicted RBP12.73□□□□□ -0.37
VMP1-217ENST00000593168 OR4D9Q8NGE8 314 aa12.73□□□□□ -0.37
VMP1-217ENST00000593168 OR8J3Q8NGG0 315 aa12.73□□□□□ -0.37
VMP1-217ENST00000593168 SNIP1Q8TAD8 396 aaKnown RBP12.73□□□□□ -0.37
VMP1-217ENST00000593168 ZCCHC10Q8TBK6 192 aa12.73□□□□□ -0.37
VMP1-217ENST00000593168 DNAJB14Q8TBM8 379 aa12.73□□□□□ -0.37
VMP1-217ENST00000593168 TMEM125Q96AQ2 219 aa12.73□□□□□ -0.37
VMP1-217ENST00000593168 GBP5Q96PP8 586 aa12.73□□□□□ -0.37
VMP1-217ENST00000593168 PHF12Q96QT6 1004 aa12.73□□□□□ -0.37
VMP1-217ENST00000593168 PANX1Q96RD7 426 aa12.73□□□□□ -0.37
VMP1-217ENST00000593168 SH3GL1Q99961 368 aa12.73□□□□□ -0.37
VMP1-217ENST00000593168 NUDT22Q9BRQ3 303 aa12.73□□□□□ -0.37
VMP1-217ENST00000593168 SLC39A3Q9BRY0 314 aa12.73□□□□□ -0.37
VMP1-217ENST00000593168 NPLQ9BXD5 320 aaPredicted RBP12.73□□□□□ -0.37
VMP1-217ENST00000593168 NANOGQ9H9S0 305 aa12.73□□□□□ -0.37
VMP1-217ENST00000593168 CLK4Q9HAZ1 481 aaKnown RBP12.73□□□□□ -0.37
VMP1-217ENST00000593168 LYRM4Q9HD34 91 aa12.73□□□□□ -0.37
VMP1-217ENST00000593168 PRDM9Q9NQV7 894 aa12.73□□□□□ -0.37
VMP1-217ENST00000593168 CMTM6Q9NX76 183 aa12.73□□□□□ -0.37
VMP1-217ENST00000593168 TEX10Q9NXF1 929 aaPredicted RBP12.73□□□□□ -0.37
VMP1-217ENST00000593168 MS4A12Q9NXJ0 267 aa12.73□□□□□ -0.37
VMP1-217ENST00000593168 KCMF1Q9P0J7 381 aa12.73□□□□□ -0.37
VMP1-217ENST00000593168 TMEM9Q9P0T7 183 aa12.73□□□□□ -0.37
VMP1-217ENST00000593168 CD300AQ9UGN4 299 aa12.73□□□□□ -0.37
VMP1-217ENST00000593168 AP3M1Q9Y2T2 418 aa12.73□□□□□ -0.37
VMP1-217ENST00000593168 ATG4BQ9Y4P1 393 aa12.73□□□□□ -0.37
VMP1-217ENST00000593168 ZNF462Q96JM2 2506 aa12.73□□□□□ -0.37
VMP1-217ENST00000593168 ATMQ13315 3056 aa12.73□□□□□ -0.37
VMP1-217ENST00000593168 MGAQ8IWI9 3026 aa12.73□□□□□ -0.37
VMP1-217ENST00000593168 HYKKA2RU49 373 aa12.72□□□□□ -0.37
VMP1-217ENST00000593168 BRINP1O60477 761 aa12.72□□□□□ -0.37
VMP1-217ENST00000593168 B3GALT4O96024 378 aa12.72□□□□□ -0.37
VMP1-217ENST00000593168 GP1BAP07359 652 aa12.72□□□□□ -0.37
VMP1-217ENST00000593168 CDK4P11802 303 aa12.72□□□□□ -0.37
VMP1-217ENST00000593168 HOXB9P17482 250 aaPredicted RBP12.72□□□□□ -0.37
VMP1-217ENST00000593168 ALDH9A1P49189 494 aa12.72□□□□□ -0.37
VMP1-217ENST00000593168 SEPHS1P49903 392 aa12.72□□□□□ -0.37
VMP1-217ENST00000593168 EEFSECP57772 596 aaKnown RBP12.72□□□□□ -0.37
VMP1-217ENST00000593168 SKP1P63208 163 aa12.72□□□□□ -0.37
VMP1-217ENST00000593168 PLIN5Q00G26 463 aa12.72□□□□□ -0.37
VMP1-217ENST00000593168 GRM7Q14831 915 aa12.72□□□□□ -0.37
VMP1-217ENST00000593168 PRSS53Q2L4Q9 553 aa12.72□□□□□ -0.37
VMP1-217ENST00000593168 MPEG1Q2M385 716 aa12.72□□□□□ -0.37
VMP1-217ENST00000593168 NDUFAF5Q5TEU4 345 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms