RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 SKP1P63208 163 aa16.85■□□□□ 0.29
VAT1-208ENST00000590924 HYAL2Q12891 473 aa16.85■□□□□ 0.29
VAT1-208ENST00000590924 IFT88Q13099 833 aa16.85■□□□□ 0.29
VAT1-208ENST00000590924 RCN2Q14257 317 aa16.85■□□□□ 0.29
VAT1-208ENST00000590924 HERC3Q15034 1050 aa16.85■□□□□ 0.29
VAT1-208ENST00000590924 TMEM35AQ53FP2 167 aa16.85■□□□□ 0.29
VAT1-208ENST00000590924 HSP90B2PQ58FF3 399 aa16.85■□□□□ 0.29
VAT1-208ENST00000590924 MFSD4BQ5TF39 518 aa16.85■□□□□ 0.29
VAT1-208ENST00000590924 TTC19Q6DKK2 380 aaPredicted RBP16.85■□□□□ 0.29
VAT1-208ENST00000590924 CHSY3Q70JA7 882 aa16.85■□□□□ 0.29
VAT1-208ENST00000590924 ABHD13Q7L211 337 aa16.85■□□□□ 0.29
VAT1-208ENST00000590924 VN1R5Q7Z5H4 357 aa16.85■□□□□ 0.29
VAT1-208ENST00000590924 TRIM42Q8IWZ5 723 aa16.85■□□□□ 0.29
VAT1-208ENST00000590924 SHISA5Q8N114 240 aa16.85■□□□□ 0.29
VAT1-208ENST00000590924 AFAP1L2Q8N4X5 818 aa16.85■□□□□ 0.29
VAT1-208ENST00000590924 AMER2Q8N7J2 671 aa16.85■□□□□ 0.29
VAT1-208ENST00000590924 KCT2Q8NC54 265 aa16.85■□□□□ 0.29
VAT1-208ENST00000590924 SRFBP1Q8NEF9 429 aaKnown RBP16.85■□□□□ 0.29
VAT1-208ENST00000590924 HUS1BQ8NHY5 278 aa16.85■□□□□ 0.29
VAT1-208ENST00000590924 PPP1R14CQ8TAE6 165 aa16.85■□□□□ 0.29
VAT1-208ENST00000590924 SUN3Q8TAQ9 357 aa16.85■□□□□ 0.29
VAT1-208ENST00000590924 ZCCHC10Q8TBK6 192 aa16.85■□□□□ 0.29
VAT1-208ENST00000590924 RAB3IL1Q8TBN0 382 aa16.85■□□□□ 0.29
VAT1-208ENST00000590924 METTL6Q8TCB7 284 aa16.85■□□□□ 0.29
VAT1-208ENST00000590924 RELTQ969Z4 430 aa16.85■□□□□ 0.29
VAT1-208ENST00000590924 MACROD1Q9BQ69 325 aa16.85■□□□□ 0.29
VAT1-208ENST00000590924 MID1IP1Q9NPA3 183 aa16.85■□□□□ 0.29
VAT1-208ENST00000590924 HCN3Q9P1Z3 774 aa16.85■□□□□ 0.29
VAT1-208ENST00000590924 ABI3Q9P2A4 366 aa16.85■□□□□ 0.29
VAT1-208ENST00000590924 IGHV3-20A0A0C4DH32 117 aa16.84■□□□□ 0.29
VAT1-208ENST00000590924 A0A1B0GTL3 188 aa16.84■□□□□ 0.29
VAT1-208ENST00000590924 SERTM1A2A2V5 107 aa16.84■□□□□ 0.29
VAT1-208ENST00000590924 TMEM114B3SHH9 223 aa16.84■□□□□ 0.29
VAT1-208ENST00000590924 SGK494L7N484 410 aa16.84■□□□□ 0.29
VAT1-208ENST00000590924 PRAMEF2O60811 474 aa16.84■□□□□ 0.29
VAT1-208ENST00000590924 RASAL1O95294 804 aa16.84■□□□□ 0.29
VAT1-208ENST00000590924 CRYABP02511 175 aaKnown RBP16.84■□□□□ 0.29
VAT1-208ENST00000590924 SERPIND1P05546 499 aa16.84■□□□□ 0.29
VAT1-208ENST00000590924 PCNAP12004 261 aa16.84■□□□□ 0.29
VAT1-208ENST00000590924 KCNK10P57789 538 aa16.84■□□□□ 0.29
VAT1-208ENST00000590924 PPP2R2AP63151 447 aa16.84■□□□□ 0.29
VAT1-208ENST00000590924 TGM3Q08188 693 aa16.84■□□□□ 0.29
VAT1-208ENST00000590924 CUL3Q13618 768 aa16.84■□□□□ 0.29
VAT1-208ENST00000590924 BTBD16Q32M84 506 aa16.84■□□□□ 0.29
VAT1-208ENST00000590924 DEPDC1Q5TB30 811 aa16.84■□□□□ 0.29
VAT1-208ENST00000590924 H3F3CQ6NXT2 135 aa16.84■□□□□ 0.29
VAT1-208ENST00000590924 ANKRD37Q7Z713 158 aa16.84■□□□□ 0.29
VAT1-208ENST00000590924 FJX1Q86VR8 437 aa16.84■□□□□ 0.29
VAT1-208ENST00000590924 PDSS2Q86YH6 399 aa16.84■□□□□ 0.29
VAT1-208ENST00000590924 TICAM1Q8IUC6 712 aa16.84■□□□□ 0.29
VAT1-208ENST00000590924 KIRREL3Q8IZU9 778 aa16.84■□□□□ 0.29
VAT1-208ENST00000590924 DNAJB8Q8NHS0 232 aa16.84■□□□□ 0.29
VAT1-208ENST00000590924 GAL3ST3Q96A11 431 aa16.84■□□□□ 0.29
VAT1-208ENST00000590924 PAIP2Q9BPZ3 127 aaKnown RBP16.84■□□□□ 0.29
VAT1-208ENST00000590924 MS4A8Q9BY19 250 aa16.84■□□□□ 0.29
VAT1-208ENST00000590924 ELOVL6Q9H5J4 265 aa16.84■□□□□ 0.29
VAT1-208ENST00000590924 BRF2Q9HAW0 419 aa16.84■□□□□ 0.29
VAT1-208ENST00000590924 STMN3Q9NZ72 180 aa16.84■□□□□ 0.29
VAT1-208ENST00000590924 WDR91A4D1P6 747 aa16.83■□□□□ 0.28
VAT1-208ENST00000590924 ULK1O75385 1050 aa16.83■□□□□ 0.28
VAT1-208ENST00000590924 RDH16O75452 317 aa16.83■□□□□ 0.28
VAT1-208ENST00000590924 TBX6O95947 436 aaPredicted RBP16.83■□□□□ 0.28
VAT1-208ENST00000590924 UROSP10746 265 aa16.83■□□□□ 0.28
VAT1-208ENST00000590924 NEFHP12036 1026 aa16.83■□□□□ 0.28
VAT1-208ENST00000590924 HSD3B1P14060 373 aa16.83■□□□□ 0.28
VAT1-208ENST00000590924 ALOX12P18054 663 aa16.83■□□□□ 0.28
VAT1-208ENST00000590924 IL10P22301 178 aa16.83■□□□□ 0.28
VAT1-208ENST00000590924 HSD3B2P26439 372 aa16.83■□□□□ 0.28
VAT1-208ENST00000590924 HMOX2P30519 316 aa16.83■□□□□ 0.28
VAT1-208ENST00000590924 CHI3L2Q15782 390 aa16.83■□□□□ 0.28
VAT1-208ENST00000590924 EXT1Q16394 746 aa16.83■□□□□ 0.28
VAT1-208ENST00000590924 ARL13AQ5H913 290 aaPredicted RBP16.83■□□□□ 0.28
VAT1-208ENST00000590924 C1QL3Q5VWW1 255 aa16.83■□□□□ 0.28
VAT1-208ENST00000590924 GFRALQ6UXV0 394 aa16.83■□□□□ 0.28
VAT1-208ENST00000590924 CDYL2Q8N8U2 506 aa16.83■□□□□ 0.28
VAT1-208ENST00000590924 OR2L5Q8NG80 312 aa16.83■□□□□ 0.28
VAT1-208ENST00000590924 UTP15Q8TED0 518 aaKnown RBP16.83■□□□□ 0.28
VAT1-208ENST00000590924 CCT6BQ92526 530 aa16.83■□□□□ 0.28
VAT1-208ENST00000590924 MS4A6EQ96DS6 147 aa16.83■□□□□ 0.28
VAT1-208ENST00000590924 OR1F2PQ96R84 312 aa16.83■□□□□ 0.28
VAT1-208ENST00000590924 ROGDIQ9GZN7 287 aa16.83■□□□□ 0.28
VAT1-208ENST00000590924 REXO4Q9GZR2 422 aaKnown RBP16.83■□□□□ 0.28
VAT1-208ENST00000590924 DMRT3Q9NQL9 472 aa16.83■□□□□ 0.28
VAT1-208ENST00000590924 PKDREJQ9NTG1 2253 aa16.83■□□□□ 0.28
VAT1-208ENST00000590924 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.83■□□□□ 0.28
VAT1-208ENST00000590924 NAALAD2Q9Y3Q0 740 aa16.83■□□□□ 0.28
VAT1-208ENST00000590924 PCDHGB6Q9Y5F9 930 aa16.83■□□□□ 0.28
VAT1-208ENST00000590924 A0A088AWK7 358 aa16.82■□□□□ 0.28
VAT1-208ENST00000590924 MAGEB17A8MXT2 336 aa16.82■□□□□ 0.28
VAT1-208ENST00000590924 MANBAO00462 879 aa16.82■□□□□ 0.28
VAT1-208ENST00000590924 ZNF10P21506 573 aaPredicted RBP16.82■□□□□ 0.28
VAT1-208ENST00000590924 STX3Q13277 289 aa16.82■□□□□ 0.28
VAT1-208ENST00000590924 TOR1AIP1Q5JTV8 583 aa16.82■□□□□ 0.28
VAT1-208ENST00000590924 KHDRBS2Q5VWX1 349 aaKnown RBP16.82■□□□□ 0.28
VAT1-208ENST00000590924 RNF165Q6ZSG1 346 aa16.82■□□□□ 0.28
VAT1-208ENST00000590924 ZCCHC23Q6ZST2 131 aa16.82■□□□□ 0.28
VAT1-208ENST00000590924 CLYBLQ8N0X4 340 aa16.82■□□□□ 0.28
VAT1-208ENST00000590924 GBP7Q8N8V2 638 aaPredicted RBP16.82■□□□□ 0.28
VAT1-208ENST00000590924 PLPP5Q8NEB5 264 aa16.82■□□□□ 0.28
VAT1-208ENST00000590924 ZNF354BQ96LW1 612 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms