RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 ZNF169Q14929 603 aaPredicted RBP14.51□□□□□ -0.09
CIRBP-228ENST00000590347 FAM187BQ17R55 369 aa14.51□□□□□ -0.09
CIRBP-228ENST00000590347 ZRANB3Q5FWF4 1079 aa14.51□□□□□ -0.09
CIRBP-228ENST00000590347 WNT2BQ93097 391 aa14.51□□□□□ -0.09
CIRBP-228ENST00000590347 NARS2Q96I59 477 aaKnown RBP14.51□□□□□ -0.09
CIRBP-228ENST00000590347 TMEM43Q9BTV4 400 aa14.51□□□□□ -0.09
CIRBP-228ENST00000590347 KATNBL1Q9H079 304 aa14.51□□□□□ -0.09
CIRBP-228ENST00000590347 METTL17Q9H7H0 456 aaPredicted RBP14.51□□□□□ -0.09
CIRBP-228ENST00000590347 TLR8Q9NR97 1041 aaKnown RBP14.51□□□□□ -0.09
CIRBP-228ENST00000590347 SEC14L4Q9UDX3 406 aa14.51□□□□□ -0.09
CIRBP-228ENST00000590347 ADAM30Q9UKF2 790 aa14.51□□□□□ -0.09
CIRBP-228ENST00000590347 CHD5Q8TDI0 1954 aa14.51□□□□□ -0.09
CIRBP-228ENST00000590347 MMP20O60882 483 aa14.5□□□□□ -0.09
CIRBP-228ENST00000590347 TSPAN12O95859 305 aa14.5□□□□□ -0.09
CIRBP-228ENST00000590347 ALDOBP05062 364 aa14.5□□□□□ -0.09
CIRBP-228ENST00000590347 MMP2P08253 660 aa14.5□□□□□ -0.09
CIRBP-228ENST00000590347 PTPN6P29350 595 aa14.5□□□□□ -0.09
CIRBP-228ENST00000590347 CDC42P60953 191 aa14.5□□□□□ -0.09
CIRBP-228ENST00000590347 TSPAN5P62079 268 aa14.5□□□□□ -0.09
CIRBP-228ENST00000590347 KCNJ10P78508 379 aa14.5□□□□□ -0.09
CIRBP-228ENST00000590347 DDX39BQ13838 428 aaKnown RBP14.5□□□□□ -0.09
CIRBP-228ENST00000590347 SPRYD7Q5W111 196 aa14.5□□□□□ -0.09
CIRBP-228ENST00000590347 C19orf48Q6RUI8 117 aa14.5□□□□□ -0.09
CIRBP-228ENST00000590347 NLRC3Q7RTR2 1065 aa14.5□□□□□ -0.09
CIRBP-228ENST00000590347 HDDC2Q7Z4H3 204 aa14.5□□□□□ -0.09
CIRBP-228ENST00000590347 TCEANCQ8N8B7 351 aa14.5□□□□□ -0.09
CIRBP-228ENST00000590347 NANPQ8TBE9 248 aa14.5□□□□□ -0.09
CIRBP-228ENST00000590347 NTAN1Q96AB6 310 aa14.5□□□□□ -0.09
CIRBP-228ENST00000590347 PPP3R2Q96LZ3 170 aa14.5□□□□□ -0.09
CIRBP-228ENST00000590347 SFXN2Q96NB2 322 aa14.5□□□□□ -0.09
CIRBP-228ENST00000590347 TSGA13Q96PP4 275 aa14.5□□□□□ -0.09
CIRBP-228ENST00000590347 PPP1R3EQ9H7J1 279 aa14.5□□□□□ -0.09
CIRBP-228ENST00000590347 NDUFAF4Q9P032 175 aa14.5□□□□□ -0.09
CIRBP-228ENST00000590347 HCN2Q9UL51 889 aa14.5□□□□□ -0.09
CIRBP-228ENST00000590347 PIN4Q9Y237 131 aaKnown RBP14.5□□□□□ -0.09
CIRBP-228ENST00000590347 TLR6Q9Y2C9 796 aa14.5□□□□□ -0.09
CIRBP-228ENST00000590347 PCDHGB3Q9Y5G1 929 aa14.5□□□□□ -0.09
CIRBP-228ENST00000590347 SHISA3A0PJX4 238 aa14.5□□□□□ -0.09
CIRBP-228ENST00000590347 MROH6A6NGR9 719 aa14.5□□□□□ -0.09
CIRBP-228ENST00000590347 IFRD1O00458 451 aaPredicted RBP14.5□□□□□ -0.09
CIRBP-228ENST00000590347 EPOP01588 193 aa14.5□□□□□ -0.09
CIRBP-228ENST00000590347 ZP3P21754 424 aa14.5□□□□□ -0.09
CIRBP-228ENST00000590347 SELENOPP49908 381 aa14.5□□□□□ -0.09
CIRBP-228ENST00000590347 MAZP56270 477 aaKnown RBP14.5□□□□□ -0.09
CIRBP-228ENST00000590347 ERVK-25P63136 954 aa14.5□□□□□ -0.09
CIRBP-228ENST00000590347 HSF2Q03933 536 aa14.5□□□□□ -0.09
CIRBP-228ENST00000590347 GRIN2CQ14957 1233 aa14.5□□□□□ -0.09
CIRBP-228ENST00000590347 MARC1Q5VT66 337 aa14.5□□□□□ -0.09
CIRBP-228ENST00000590347 CRYBG2Q8N1P7 616 aa14.5□□□□□ -0.09
CIRBP-228ENST00000590347 LILRB2Q8N423 598 aa14.5□□□□□ -0.09
CIRBP-228ENST00000590347 DUSP18Q8NEJ0 188 aa14.5□□□□□ -0.09
CIRBP-228ENST00000590347 CDKN2AIPNLQ96HQ2 116 aa14.5□□□□□ -0.09
CIRBP-228ENST00000590347 DMRTA2Q96SC8 542 aa14.5□□□□□ -0.09
CIRBP-228ENST00000590347 P2RY13Q9BPV8 354 aa14.5□□□□□ -0.09
CIRBP-228ENST00000590347 REG4Q9BYZ8 158 aa14.5□□□□□ -0.09
CIRBP-228ENST00000590347 TMEM245Q9H330 911 aa14.5□□□□□ -0.09
CIRBP-228ENST00000590347 ELOVL2Q9NXB9 296 aa14.5□□□□□ -0.09
CIRBP-228ENST00000590347 RAB23Q9ULC3 237 aa14.5□□□□□ -0.09
CIRBP-228ENST00000590347 EDARQ9UNE0 448 aa14.5□□□□□ -0.09
CIRBP-228ENST00000590347 CLCA2Q9UQC9 943 aa14.5□□□□□ -0.09
CIRBP-228ENST00000590347 PRSS44E7EML9 344 aa14.5□□□□□ -0.09
CIRBP-228ENST00000590347 RGS14O43566 566 aa14.5□□□□□ -0.09
CIRBP-228ENST00000590347 JUPP14923 745 aa14.5□□□□□ -0.09
CIRBP-228ENST00000590347 IL2P60568 153 aa14.5□□□□□ -0.09
CIRBP-228ENST00000590347 DUSP28Q4G0W2 176 aa14.5□□□□□ -0.09
CIRBP-228ENST00000590347 CST9Q5W186 159 aa14.5□□□□□ -0.09
CIRBP-228ENST00000590347 WASH2PQ6VEQ5 465 aa14.5□□□□□ -0.09
CIRBP-228ENST00000590347 SLC30A8Q8IWU4 369 aa14.5□□□□□ -0.09
CIRBP-228ENST00000590347 ZNF527Q8NB42 609 aa14.5□□□□□ -0.09
CIRBP-228ENST00000590347 SPRTNQ9H040 489 aaPredicted RBP14.5□□□□□ -0.09
CIRBP-228ENST00000590347 SLC25A51Q9H1U9 297 aa14.5□□□□□ -0.09
CIRBP-228ENST00000590347 OR51J1Q9H342 316 aa14.5□□□□□ -0.09
CIRBP-228ENST00000590347 RPS6KA6Q9UK32 745 aa14.5□□□□□ -0.09
CIRBP-228ENST00000590347 CCL27Q9Y4X3 112 aa14.5□□□□□ -0.09
CIRBP-228ENST00000590347 PRAMEF25A6NGN4 478 aa14.49□□□□□ -0.09
CIRBP-228ENST00000590347 PDCD5O14737 125 aa14.49□□□□□ -0.09
CIRBP-228ENST00000590347 TO15178 435 aa14.49□□□□□ -0.09
CIRBP-228ENST00000590347 YY2O15391 372 aa14.49□□□□□ -0.09
CIRBP-228ENST00000590347 PROM1O43490 865 aa14.49□□□□□ -0.09
CIRBP-228ENST00000590347 PCDH7O60245 1069 aa14.49□□□□□ -0.09
CIRBP-228ENST00000590347 GASTP01350 101 aa14.49□□□□□ -0.09
CIRBP-228ENST00000590347 CBR1P16152 277 aa14.49□□□□□ -0.09
CIRBP-228ENST00000590347 ZNF157P51786 506 aaPredicted RBP14.49□□□□□ -0.09
CIRBP-228ENST00000590347 COL28A1Q2UY09 1125 aa14.49□□□□□ -0.09
CIRBP-228ENST00000590347 ATP13A5Q4VNC0 1218 aa14.49□□□□□ -0.09
CIRBP-228ENST00000590347 FAM180BQ6P0A1 224 aa14.49□□□□□ -0.09
CIRBP-228ENST00000590347 SLC16A13Q7RTY0 426 aa14.49□□□□□ -0.09
CIRBP-228ENST00000590347 NXPE2Q96DL1 559 aa14.49□□□□□ -0.09
CIRBP-228ENST00000590347 OTUB1Q96FW1 271 aaPredicted RBP14.49□□□□□ -0.09
CIRBP-228ENST00000590347 WBP1Q96G27 269 aa14.49□□□□□ -0.09
CIRBP-228ENST00000590347 ADAT1Q9BUB4 502 aaKnown RBP14.49□□□□□ -0.09
CIRBP-228ENST00000590347 CDCA4Q9BXL8 241 aa14.49□□□□□ -0.09
CIRBP-228ENST00000590347 CRTAC1Q9NQ79 661 aa14.49□□□□□ -0.09
CIRBP-228ENST00000590347 CUEDC1Q9NWM3 386 aaPredicted RBP14.49□□□□□ -0.09
CIRBP-228ENST00000590347 EXTL2Q9UBQ6 330 aa14.49□□□□□ -0.09
CIRBP-228ENST00000590347 GPR160Q9UJ42 338 aa14.49□□□□□ -0.09
CIRBP-228ENST00000590347 TEX13CA0A0J9YWL9 993 aa14.49□□□□□ -0.09
CIRBP-228ENST00000590347 CD8B2A6NJW9 211 aa14.49□□□□□ -0.09
CIRBP-228ENST00000590347 QSOX1O00391 747 aa14.49□□□□□ -0.09
CIRBP-228ENST00000590347 WNT9AO14904 365 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 319.5 ms