RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 RPUSD3Q6P087 351 aaKnown RBP17■□□□□ 0.31
DDX39A-212ENST00000590260 TRABD2AQ86V40 505 aa17■□□□□ 0.31
DDX39A-212ENST00000590260 EFCAB3Q8N7B9 438 aa17■□□□□ 0.31
DDX39A-212ENST00000590260 CDYL2Q8N8U2 506 aa17■□□□□ 0.31
DDX39A-212ENST00000590260 MDS2Q8NDY4 140 aa17■□□□□ 0.31
DDX39A-212ENST00000590260 NCLNQ969V3 563 aa17■□□□□ 0.31
DDX39A-212ENST00000590260 ZNF354BQ96LW1 612 aa17■□□□□ 0.31
DDX39A-212ENST00000590260 KCNA7Q96RP8 456 aa17■□□□□ 0.31
DDX39A-212ENST00000590260 SERPINI1Q99574 410 aa17■□□□□ 0.31
DDX39A-212ENST00000590260 HES7Q9BYE0 225 aa17■□□□□ 0.31
DDX39A-212ENST00000590260 TEX10Q9NXF1 929 aaPredicted RBP17■□□□□ 0.31
DDX39A-212ENST00000590260 ANKRD10Q9NXR5 420 aa17■□□□□ 0.31
DDX39A-212ENST00000590260 LGALS13Q9UHV8 139 aa17■□□□□ 0.31
DDX39A-212ENST00000590260 MRPS33Q9Y291 106 aaKnown RBP17■□□□□ 0.31
DDX39A-212ENST00000590260 COPG1Q9Y678 874 aaKnown RBP17■□□□□ 0.31
DDX39A-212ENST00000590260 TLDC2A0PJX2 215 aa16.99■□□□□ 0.31
DDX39A-212ENST00000590260 DYTNA2CJ06 578 aa16.99■□□□□ 0.31
DDX39A-212ENST00000590260 MANBAO00462 879 aa16.99■□□□□ 0.31
DDX39A-212ENST00000590260 WISP2O76076 250 aa16.99■□□□□ 0.31
DDX39A-212ENST00000590260 CBX6O95503 412 aa16.99■□□□□ 0.31
DDX39A-212ENST00000590260 DDAH2O95865 285 aa16.99■□□□□ 0.31
DDX39A-212ENST00000590260 FAM58BPP0C7Q3 252 aa16.99■□□□□ 0.31
DDX39A-212ENST00000590260 CREB1P16220 341 aa16.99■□□□□ 0.31
DDX39A-212ENST00000590260 FOXA1P55317 472 aa16.99■□□□□ 0.31
DDX39A-212ENST00000590260 MLF1P58340 268 aa16.99■□□□□ 0.31
DDX39A-212ENST00000590260 ELAVL1Q15717 326 aaKnown RBP16.99■□□□□ 0.31
DDX39A-212ENST00000590260 MEP1AQ16819 746 aa16.99■□□□□ 0.31
DDX39A-212ENST00000590260 ZNF324BQ6AW86 544 aaPredicted RBP16.99■□□□□ 0.31
DDX39A-212ENST00000590260 EMBQ6PCB8 327 aa16.99■□□□□ 0.31
DDX39A-212ENST00000590260 C16orf47Q6ZP98 133 aaPredicted RBP16.99■□□□□ 0.31
DDX39A-212ENST00000590260 RPS19BP1Q86WX3 136 aaKnown RBP16.99■□□□□ 0.31
DDX39A-212ENST00000590260 NUDT13Q86X67 352 aa16.99■□□□□ 0.31
DDX39A-212ENST00000590260 SLC22A9Q8IVM8 553 aa16.99■□□□□ 0.31
DDX39A-212ENST00000590260 METTL4Q8N3J2 472 aa16.99■□□□□ 0.31
DDX39A-212ENST00000590260 ARMC2Q8NEN0 867 aa16.99■□□□□ 0.31
DDX39A-212ENST00000590260 GRHL3Q8TE85 626 aa16.99■□□□□ 0.31
DDX39A-212ENST00000590260 RPF2Q9H7B2 306 aaKnown RBP16.99■□□□□ 0.31
DDX39A-212ENST00000590260 RAB21Q9UL25 225 aa16.99■□□□□ 0.31
DDX39A-212ENST00000590260 PRRC2CQ9Y520 2896 aaKnown RBP16.99■□□□□ 0.31
DDX39A-212ENST00000590260 NBASA2RRP1 2371 aa16.98■□□□□ 0.31
DDX39A-212ENST00000590260 TRAV17A0A0B4J275 112 aa16.98■□□□□ 0.31
DDX39A-212ENST00000590260 TRBV11-1A0A0K0K1C0 115 aa16.98■□□□□ 0.31
DDX39A-212ENST00000590260 GLOD5A6NK44 160 aa16.98■□□□□ 0.31
DDX39A-212ENST00000590260 GABRR3A8MPY1 467 aa16.98■□□□□ 0.31
DDX39A-212ENST00000590260 HRKO00198 91 aa16.98■□□□□ 0.31
DDX39A-212ENST00000590260 NEURL1O76050 574 aa16.98■□□□□ 0.31
DDX39A-212ENST00000590260 AIFM1O95831 613 aa16.98■□□□□ 0.31
DDX39A-212ENST00000590260 PHEXP78562 749 aa16.98■□□□□ 0.31
DDX39A-212ENST00000590260 FOLH1Q04609 750 aa16.98■□□□□ 0.31
DDX39A-212ENST00000590260 IFT88Q13099 833 aa16.98■□□□□ 0.31
DDX39A-212ENST00000590260 NR6A1Q15406 480 aa16.98■□□□□ 0.31
DDX39A-212ENST00000590260 TTC19Q6DKK2 380 aaPredicted RBP16.98■□□□□ 0.31
DDX39A-212ENST00000590260 GPRIN3Q6ZVF9 776 aa16.98■□□□□ 0.31
DDX39A-212ENST00000590260 LGI4Q8N135 537 aa16.98■□□□□ 0.31
DDX39A-212ENST00000590260 MREGQ8N565 214 aa16.98■□□□□ 0.31
DDX39A-212ENST00000590260 BANPQ8N9N5 519 aa16.98■□□□□ 0.31
DDX39A-212ENST00000590260 AGAP11Q8TF27 550 aa16.98■□□□□ 0.31
DDX39A-212ENST00000590260 SELENOMQ8WWX9 145 aa16.98■□□□□ 0.31
DDX39A-212ENST00000590260 ELOVL6Q9H5J4 265 aa16.98■□□□□ 0.31
DDX39A-212ENST00000590260 PRM3Q9NNZ6 103 aa16.98■□□□□ 0.31
DDX39A-212ENST00000590260 LYARQ9NX58 379 aaKnown RBP16.98■□□□□ 0.31
DDX39A-212ENST00000590260 GRID1Q9ULK0 1009 aa16.98■□□□□ 0.31
DDX39A-212ENST00000590260 TIMM22Q9Y584 194 aa16.98■□□□□ 0.31
DDX39A-212ENST00000590260 ARHGAP10A1A4S6 786 aa16.97■□□□□ 0.31
DDX39A-212ENST00000590260 COPEO14579 308 aa16.97■□□□□ 0.31
DDX39A-212ENST00000590260 PGRMC2O15173 223 aa16.97■□□□□ 0.31
DDX39A-212ENST00000590260 UQCRHP07919 91 aa16.97■□□□□ 0.31
DDX39A-212ENST00000590260 MYL2P10916 166 aa16.97■□□□□ 0.31
DDX39A-212ENST00000590260 PMP22Q01453 160 aa16.97■□□□□ 0.31
DDX39A-212ENST00000590260 LCP2Q13094 533 aa16.97■□□□□ 0.31
DDX39A-212ENST00000590260 RCN2Q14257 317 aa16.97■□□□□ 0.31
DDX39A-212ENST00000590260 PCLAFQ15004 111 aa16.97■□□□□ 0.31
DDX39A-212ENST00000590260 SPINK14Q6IE38 97 aa16.97■□□□□ 0.31
DDX39A-212ENST00000590260 COMMD6Q7Z4G1 85 aa16.97■□□□□ 0.31
DDX39A-212ENST00000590260 MMP21Q8N119 569 aa16.97■□□□□ 0.31
DDX39A-212ENST00000590260 CNPY4Q8N129 248 aa16.97■□□□□ 0.31
DDX39A-212ENST00000590260 SLC5A8Q8N695 610 aa16.97■□□□□ 0.31
DDX39A-212ENST00000590260 DOK4Q8TEW6 326 aa16.97■□□□□ 0.31
DDX39A-212ENST00000590260 THAP3Q8WTV1 239 aaPredicted RBP16.97■□□□□ 0.31
DDX39A-212ENST00000590260 SREK1Q8WXA9 508 aaKnown RBP16.97■□□□□ 0.31
DDX39A-212ENST00000590260 PPWD1Q96BP3 646 aaKnown RBP16.97■□□□□ 0.31
DDX39A-212ENST00000590260 VMP1Q96GC9 406 aa16.97■□□□□ 0.31
DDX39A-212ENST00000590260 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.97■□□□□ 0.314e-7■□□□□ 10.9
DDX39A-212ENST00000590260 TRIM45Q9H8W5 580 aaPredicted RBP16.97■□□□□ 0.31
DDX39A-212ENST00000590260 LIN28AQ9H9Z2 209 aaKnown RBP16.97■□□□□ 0.31
DDX39A-212ENST00000590260 BRF2Q9HAW0 419 aa16.97■□□□□ 0.31
DDX39A-212ENST00000590260 OXSMQ9NWU1 459 aa16.97■□□□□ 0.31
DDX39A-212ENST00000590260 MKS1Q9NXB0 559 aa16.97■□□□□ 0.31
DDX39A-212ENST00000590260 MS4A12Q9NXJ0 267 aa16.97■□□□□ 0.31
DDX39A-212ENST00000590260 MAP10Q9P2G4 905 aa16.97■□□□□ 0.31
DDX39A-212ENST00000590260 TEKT2Q9UIF3 430 aa16.97■□□□□ 0.31
DDX39A-212ENST00000590260 PHF11Q9UIL8 331 aa16.97■□□□□ 0.31
DDX39A-212ENST00000590260 SLC12A4Q9UP95 1085 aa16.97■□□□□ 0.31
DDX39A-212ENST00000590260 BLACEA4D250 179 aa16.96■□□□□ 0.31
DDX39A-212ENST00000590260 ZNF354AO60765 605 aaPredicted RBP16.96■□□□□ 0.31
DDX39A-212ENST00000590260 PRAMEF2O60811 474 aa16.96■□□□□ 0.31
DDX39A-212ENST00000590260 VPS4BO75351 444 aa16.96■□□□□ 0.31
DDX39A-212ENST00000590260 IFNA16P05015 189 aa16.96■□□□□ 0.31
DDX39A-212ENST00000590260 KLK1P06870 262 aa16.96■□□□□ 0.31
DDX39A-212ENST00000590260 CCT5P48643 541 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms