RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 FPGSQ05932 587 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 ITGADQ13349 1161 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 GAB1Q13480 694 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 DGCR6Q14129 220 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 CTF1Q16619 201 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 SLC5A12Q1EHB4 618 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 ZNF658BQ4V348 819 aaPredicted RBP7.06□□□□□ -1.28
ZNF540-206ENST00000589117 FAM209AQ5JX71 171 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 KIAA1211LQ6NV74 962 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 PSRC1Q6PGN9 363 aaPredicted RBP7.06□□□□□ -1.28
ZNF540-206ENST00000589117 LRFN4Q6PJG9 635 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 SLC16A12Q6ZSM3 486 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 LHFPL2Q6ZUX7 228 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 LRRTM4Q86VH4 590 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 TAGAPQ8N103 731 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 MINDY2Q8NBR6 621 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 VN1R2Q8NFZ6 395 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 NFKBIDQ8NI38 313 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 GPBAR1Q8TDU6 330 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 OR5P2Q8WZ92 322 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 SMG7Q92540 1137 aaKnown RBP7.06□□□□□ -1.28
ZNF540-206ENST00000589117 SGCDQ92629 289 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 CSF3RQ99062 836 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 BARD1Q99728 777 aaKnown RBP7.06□□□□□ -1.28
ZNF540-206ENST00000589117 MAPKAP1Q9BPZ7 522 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 ITPAQ9BY32 194 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 HDAC8Q9BY41 377 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 PELI2Q9HAT8 420 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 RHBDL2Q9NX52 303 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 REV1Q9UBZ9 1251 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 TMCC3Q9ULS5 477 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 ERGIC3Q9Y282 383 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 TDRKHQ9Y2W6 561 aaKnown RBP7.06□□□□□ -1.28
ZNF540-206ENST00000589117 SNX8Q9Y5X2 465 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 ARRDC5A6NEK1 342 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 CLCA1A8K7I4 914 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 PCDHGA12O60330 932 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 FOXD2O60548 495 aaPredicted RBP7.05□□□□□ -1.28
ZNF540-206ENST00000589117 CNOT3O75175 753 aaKnown RBP7.05□□□□□ -1.28
ZNF540-206ENST00000589117 CCNB2O95067 398 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 GADD45GO95257 159 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 NADKO95544 446 aaPredicted RBP7.05□□□□□ -1.28
ZNF540-206ENST00000589117 FADS2O95864 444 aaKnown RBP7.05□□□□□ -1.28
ZNF540-206ENST00000589117 SOD1P00441 154 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 GBAP04062 536 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 HLA-EP13747 358 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 DDCP20711 480 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 IDH2P48735 452 aaKnown RBP7.05□□□□□ -1.28
ZNF540-206ENST00000589117 ANXA11P50995 505 aaKnown RBP7.05□□□□□ -1.28
ZNF540-206ENST00000589117 HMGA2P52926 109 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 CDH12P55289 794 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 NFE2L1Q14494 772 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 SPCS2Q15005 226 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 PDGFRLQ15198 375 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 DEPDC1Q5TB30 811 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 KHDRBS2Q5VWX1 349 aaKnown RBP7.05□□□□□ -1.28
ZNF540-206ENST00000589117 AHSA2Q719I0 299 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 SLC9B2Q86UD5 537 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 TRIM74Q86UV6 250 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 RNF130Q86XS8 419 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 LGI4Q8N135 537 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 STX19Q8N4C7 294 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 TBC1D19Q8N5T2 526 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 SLC15A4Q8N697 577 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 TTLQ8NG68 377 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 RHOXF1Q8NHV9 184 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 CHPT1Q8WUD6 406 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 CHAC2Q8WUX2 184 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 SMPDL3AQ92484 453 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 PROX1Q92786 737 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 LGALS12Q96DT0 336 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 ZHX1-C8orf76Q96EF9 292 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 ZBED6CLQ96FA7 236 aaPredicted RBP7.05□□□□□ -1.28
ZNF540-206ENST00000589117 SH3YL1Q96HL8 342 aaPredicted RBP7.05□□□□□ -1.28
ZNF540-206ENST00000589117 ZNF607Q96SK3 696 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 TM9SF2Q99805 663 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 ZDHHC5Q9C0B5 715 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 OR52A5Q9H2C5 316 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 RHBGQ9H310 441 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 RAB23Q9ULC3 237 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 ACSL5Q9ULC5 683 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 SH3GLB1Q9Y371 365 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 PCDHGA6Q9Y5G7 932 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 DGKBQ9Y6T7 804 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 MYOFQ9NZM1 2061 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 SH3D21A4FU49 640 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 K7ESM1 405 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 CACNB4O00305 520 aaPredicted RBP7.05□□□□□ -1.28
ZNF540-206ENST00000589117 KMOO15229 486 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 TBX19O60806 448 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 SERPINB7O75635 380 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 MT-ND2P03891 347 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 IL3P08700 152 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 SLC35G4P0C7Q5 338 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 ARAFP10398 606 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 CD36P16671 472 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 PRR20EP86478 221 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 PRR20CP86479 221 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 PRR20DP86480 221 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 PRR20BP86481 221 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms