RNA–Protein interactions for RNA: ENST00000589104.5

KDM4B-208, Transcript of lysine demethylase 4B, humanhuman

TSL 2

Gene KDM4B, Length 3,470 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-208ENST00000589104 SYT16Q17RD7 645 aa12.78□□□□□ -0.36
KDM4B-208ENST00000589104 Q5BKY6 102 aa12.78□□□□□ -0.36
KDM4B-208ENST00000589104 GPR153Q6NV75 609 aa12.78□□□□□ -0.36
KDM4B-208ENST00000589104 SEZ6L2Q6UXD5 910 aa12.78□□□□□ -0.36
KDM4B-208ENST00000589104 DNAJB7Q7Z6W7 309 aaPredicted RBP12.78□□□□□ -0.36
KDM4B-208ENST00000589104 B3GNT4Q9C0J1 378 aa12.78□□□□□ -0.36
KDM4B-208ENST00000589104 PLSCR3Q9NRY6 295 aa12.78□□□□□ -0.36
KDM4B-208ENST00000589104 RASSF1Q9NS23 344 aa12.78□□□□□ -0.36
KDM4B-208ENST00000589104 RNF186Q9NXI6 227 aa12.78□□□□□ -0.36
KDM4B-208ENST00000589104 MS4A12Q9NXJ0 267 aa12.78□□□□□ -0.36
KDM4B-208ENST00000589104 RAPGEFL1Q9UHV5 662 aa12.78□□□□□ -0.36
KDM4B-208ENST00000589104 DIMT1Q9UNQ2 313 aaKnown RBP12.78□□□□□ -0.36
KDM4B-208ENST00000589104 PCDHB7Q9Y5E2 793 aa12.78□□□□□ -0.36
KDM4B-208ENST00000589104 ETFAP13804 333 aa12.77□□□□□ -0.36
KDM4B-208ENST00000589104 COX7A2P14406 83 aa12.77□□□□□ -0.36
KDM4B-208ENST00000589104 ELAVL4P26378 380 aaKnown RBP12.77□□□□□ -0.36
KDM4B-208ENST00000589104 FGF9P31371 208 aaPredicted RBP12.77□□□□□ -0.36
KDM4B-208ENST00000589104 TNFSF8P32971 234 aa12.77□□□□□ -0.36
KDM4B-208ENST00000589104 CRISP1P54107 249 aa12.77□□□□□ -0.36
KDM4B-208ENST00000589104 CEBPEQ15744 281 aa12.77□□□□□ -0.36
KDM4B-208ENST00000589104 CDONQ4KMG0 1287 aa12.77□□□□□ -0.36
KDM4B-208ENST00000589104 MPPE1Q53F39 396 aa12.77□□□□□ -0.36
KDM4B-208ENST00000589104 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.77□□□□□ -0.36
KDM4B-208ENST00000589104 PIAS4Q8N2W9 510 aaPredicted RBP12.77□□□□□ -0.36
KDM4B-208ENST00000589104 OR9Q2Q8NGE9 314 aa12.77□□□□□ -0.36
KDM4B-208ENST00000589104 PXYLP1Q8TE99 480 aa12.77□□□□□ -0.36
KDM4B-208ENST00000589104 TIMP4Q99727 224 aa12.77□□□□□ -0.36
KDM4B-208ENST00000589104 PPP1R3EQ9H7J1 279 aa12.77□□□□□ -0.36
KDM4B-208ENST00000589104 TAS2R16Q9NYV7 291 aa12.77□□□□□ -0.36
KDM4B-208ENST00000589104 INSL5Q9Y5Q6 135 aa12.77□□□□□ -0.36
KDM4B-208ENST00000589104 MOSPD3O75425 235 aa12.77□□□□□ -0.37
KDM4B-208ENST00000589104 PTBP1P26599 531 aaKnown RBP eCLIP12.77□□□□□ -0.372e-7■■■□□ 19.2
KDM4B-208ENST00000589104 KRR1Q13601 381 aaKnown RBP12.77□□□□□ -0.37
KDM4B-208ENST00000589104 BAK1Q16611 211 aa12.77□□□□□ -0.37
KDM4B-208ENST00000589104 CPTPQ5TA50 214 aa12.77□□□□□ -0.37
KDM4B-208ENST00000589104 AGTRAPQ6RW13 159 aa12.77□□□□□ -0.37
KDM4B-208ENST00000589104 OTOP2Q7RTS6 562 aa12.77□□□□□ -0.37
KDM4B-208ENST00000589104 LGI4Q8N135 537 aa12.77□□□□□ -0.37
KDM4B-208ENST00000589104 DBF4BQ8NFT6 615 aa12.77□□□□□ -0.37
KDM4B-208ENST00000589104 CREB3L4Q8TEY5 395 aa12.77□□□□□ -0.37
KDM4B-208ENST00000589104 C16orf78Q8WTQ4 265 aa12.77□□□□□ -0.37
KDM4B-208ENST00000589104 Q96MT0 163 aa12.77□□□□□ -0.37
KDM4B-208ENST00000589104 FERD3LQ96RJ6 166 aa12.77□□□□□ -0.37
KDM4B-208ENST00000589104 SPNS1Q9H2V7 528 aa12.77□□□□□ -0.37
KDM4B-208ENST00000589104 SMURF1Q9HCE7 757 aa12.77□□□□□ -0.37
KDM4B-208ENST00000589104 B4GALT6Q9UBX8 382 aa12.77□□□□□ -0.37
KDM4B-208ENST00000589104 A4GNTQ9UNA3 340 aa12.77□□□□□ -0.37
KDM4B-208ENST00000589104 WBP11Q9Y2W2 641 aaKnown RBP12.77□□□□□ -0.37
KDM4B-208ENST00000589104 CENPBD1B2RD01 187 aa12.76□□□□□ -0.37
KDM4B-208ENST00000589104 TBX1O43435 398 aa12.76□□□□□ -0.37
KDM4B-208ENST00000589104 CD72P21854 359 aa12.76□□□□□ -0.37
KDM4B-208ENST00000589104 SLC5A12Q1EHB4 618 aa12.76□□□□□ -0.37
KDM4B-208ENST00000589104 ENTPD8Q5MY95 495 aa12.76□□□□□ -0.37
KDM4B-208ENST00000589104 TCTN3Q6NUS6 607 aa12.76□□□□□ -0.37
KDM4B-208ENST00000589104 USP45Q70EL2 814 aa12.76□□□□□ -0.37
KDM4B-208ENST00000589104 SPATC1Q76KD6 591 aa12.76□□□□□ -0.37
KDM4B-208ENST00000589104 C11orf96Q7Z7L8 435 aa12.76□□□□□ -0.37
KDM4B-208ENST00000589104 PROKR2Q8NFJ6 384 aa12.76□□□□□ -0.37
KDM4B-208ENST00000589104 OR4K1Q8NGD4 311 aa12.76□□□□□ -0.37
KDM4B-208ENST00000589104 TTC9Q92623 222 aa12.76□□□□□ -0.37
KDM4B-208ENST00000589104 NEIL2Q969S2 332 aa12.76□□□□□ -0.37
KDM4B-208ENST00000589104 BRD9Q9H8M2 597 aa12.76□□□□□ -0.37
KDM4B-208ENST00000589104 NMNAT1Q9HAN9 279 aaPredicted RBP12.76□□□□□ -0.37
KDM4B-208ENST00000589104 KLF15Q9UIH9 416 aa12.76□□□□□ -0.37
KDM4B-208ENST00000589104 LIPT1Q9Y234 373 aa12.76□□□□□ -0.37
KDM4B-208ENST00000589104 SNTNA6NMZ2 147 aa12.76□□□□□ -0.37
KDM4B-208ENST00000589104 ALX3O95076 343 aa12.76□□□□□ -0.37
KDM4B-208ENST00000589104 DBTP11182 482 aaKnown RBP12.76□□□□□ -0.37
KDM4B-208ENST00000589104 OSMP13725 252 aa12.76□□□□□ -0.37
KDM4B-208ENST00000589104 RPL17P18621 184 aaKnown RBP12.76□□□□□ -0.37
KDM4B-208ENST00000589104 VIPR1P32241 457 aa12.76□□□□□ -0.37
KDM4B-208ENST00000589104 GSTM5P46439 218 aa12.76□□□□□ -0.37
KDM4B-208ENST00000589104 SMAD3P84022 425 aaKnown RBP12.76□□□□□ -0.37
KDM4B-208ENST00000589104 C19orf57Q0VDD7 668 aa12.76□□□□□ -0.37
KDM4B-208ENST00000589104 TNK1Q13470 666 aa12.76□□□□□ -0.37
KDM4B-208ENST00000589104 SCARB2Q14108 478 aa12.76□□□□□ -0.37
KDM4B-208ENST00000589104 CDK10Q15131 360 aa12.76□□□□□ -0.37
KDM4B-208ENST00000589104 PGBD2Q6P3X8 592 aa12.76□□□□□ -0.37
KDM4B-208ENST00000589104 PRICKLE2Q7Z3G6 844 aa12.76□□□□□ -0.37
KDM4B-208ENST00000589104 NRSN1Q8IZ57 195 aa12.76□□□□□ -0.37
KDM4B-208ENST00000589104 TCTE3Q8IZS6 198 aa12.76□□□□□ -0.37
KDM4B-208ENST00000589104 LSMEM1Q8N8F7 131 aa12.76□□□□□ -0.37
KDM4B-208ENST00000589104 TP53I13Q8NBR0 393 aaPredicted RBP12.76□□□□□ -0.37
KDM4B-208ENST00000589104 DACT3Q96B18 629 aaPredicted RBP12.76□□□□□ -0.37
KDM4B-208ENST00000589104 FAM129BQ96TA1 746 aa12.76□□□□□ -0.37
KDM4B-208ENST00000589104 MGLLQ99685 303 aa12.76□□□□□ -0.37
KDM4B-208ENST00000589104 TTYH2Q9BSA4 534 aa12.76□□□□□ -0.37
KDM4B-208ENST00000589104 TAS2R7Q9NYW3 318 aa12.76□□□□□ -0.37
KDM4B-208ENST00000589104 LRP4O75096 1905 aa12.76□□□□□ -0.37
KDM4B-208ENST00000589104 IL1AP01583 271 aa12.76□□□□□ -0.37
KDM4B-208ENST00000589104 ITGA2P17301 1181 aa12.76□□□□□ -0.37
KDM4B-208ENST00000589104 GALP22466 123 aa12.76□□□□□ -0.37
KDM4B-208ENST00000589104 GTF2E2P29084 291 aaKnown RBP12.76□□□□□ -0.37
KDM4B-208ENST00000589104 PTGS2P35354 604 aa12.76□□□□□ -0.37
KDM4B-208ENST00000589104 MMP12P39900 470 aa12.76□□□□□ -0.37
KDM4B-208ENST00000589104 DGCR6Q14129 220 aa12.76□□□□□ -0.37
KDM4B-208ENST00000589104 STARD3Q14849 445 aa12.76□□□□□ -0.37
KDM4B-208ENST00000589104 TIGD3Q6B0B8 471 aa12.76□□□□□ -0.37
KDM4B-208ENST00000589104 BHLHB9Q6PI77 547 aa12.76□□□□□ -0.37
KDM4B-208ENST00000589104 DUSP18Q8NEJ0 188 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms