RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 EHD3Q9NZN3 535 aa10.67□□□□□ -0.7
VMP1-207ENST00000588131 NDOR1Q9UHB4 597 aa10.67□□□□□ -0.7
VMP1-207ENST00000588131 CROTQ9UKG9 612 aa10.67□□□□□ -0.7
VMP1-207ENST00000588131 RARRES3Q9UL19 164 aa10.67□□□□□ -0.7
VMP1-207ENST00000588131 ERVK-11Q9UQG0 969 aa10.67□□□□□ -0.7
VMP1-207ENST00000588131 PCDHGA7Q9Y5G6 932 aa10.67□□□□□ -0.7
VMP1-207ENST00000588131 MAU2Q9Y6X3 613 aa10.67□□□□□ -0.7
VMP1-207ENST00000588131 A0A096LPI6 279 aa10.66□□□□□ -0.7
VMP1-207ENST00000588131 PRSS51A0A1B0GVH4 220 aa10.66□□□□□ -0.7
VMP1-207ENST00000588131 SPAARA0A1B0GVQ0 90 aa10.66□□□□□ -0.7
VMP1-207ENST00000588131 H0YIG0 161 aa10.66□□□□□ -0.7
VMP1-207ENST00000588131 RNASET2O00584 256 aaKnown RBP10.66□□□□□ -0.7
VMP1-207ENST00000588131 CYR61O00622 381 aa10.66□□□□□ -0.7
VMP1-207ENST00000588131 PDPK1O15530 556 aa10.66□□□□□ -0.7
VMP1-207ENST00000588131 SCRG1O75711 98 aa10.66□□□□□ -0.7
VMP1-207ENST00000588131 KCNH1O95259 989 aa10.66□□□□□ -0.7
VMP1-207ENST00000588131 CPSF4O95639 269 aaKnown RBP10.66□□□□□ -0.7
VMP1-207ENST00000588131 C6orf47O95873 294 aa10.66□□□□□ -0.7
VMP1-207ENST00000588131 MT-CO3P00414 261 aa10.66□□□□□ -0.7
VMP1-207ENST00000588131 C1QCP02747 245 aa10.66□□□□□ -0.7
VMP1-207ENST00000588131 GSNP06396 782 aa10.66□□□□□ -0.7
VMP1-207ENST00000588131 FGF5P12034 268 aa10.66□□□□□ -0.7
VMP1-207ENST00000588131 ALAS2P22557 587 aa10.66□□□□□ -0.7
VMP1-207ENST00000588131 PTPN6P29350 595 aa10.66□□□□□ -0.7
VMP1-207ENST00000588131 BUD31P41223 144 aaPredicted RBP10.66□□□□□ -0.7
VMP1-207ENST00000588131 FRKP42685 505 aaPredicted RBP10.66□□□□□ -0.7
VMP1-207ENST00000588131 OR1D4P47884 311 aa10.66□□□□□ -0.7
VMP1-207ENST00000588131 ARSFP54793 590 aa10.66□□□□□ -0.7
VMP1-207ENST00000588131 PCBP4P57723 403 aaKnown RBP10.66□□□□□ -0.7
VMP1-207ENST00000588131 MC2RQ01718 297 aa10.66□□□□□ -0.7
VMP1-207ENST00000588131 ISXQ2M1V0 245 aa10.66□□□□□ -0.7
VMP1-207ENST00000588131 ZNF750Q32MQ0 723 aa10.66□□□□□ -0.7
VMP1-207ENST00000588131 DNAL1Q4LDG9 190 aa10.66□□□□□ -0.7
VMP1-207ENST00000588131 ANXA8L1Q5VT79 327 aa10.66□□□□□ -0.7
VMP1-207ENST00000588131 C1orf189Q5VU69 101 aa10.66□□□□□ -0.7
VMP1-207ENST00000588131 YOD1Q5VVQ6 348 aaPredicted RBP10.66□□□□□ -0.7
VMP1-207ENST00000588131 PWWP2BQ6NUJ5 590 aa10.66□□□□□ -0.7
VMP1-207ENST00000588131 NIPAL1Q6NVV3 410 aa10.66□□□□□ -0.7
VMP1-207ENST00000588131 SLC38A9Q8NBW4 561 aa10.66□□□□□ -0.7
VMP1-207ENST00000588131 DNAJB14Q8TBM8 379 aa10.66□□□□□ -0.7
VMP1-207ENST00000588131 CNRIP1Q96F85 164 aaPredicted RBP10.66□□□□□ -0.7
VMP1-207ENST00000588131 PEX11GQ96HA9 241 aa10.66□□□□□ -0.7
VMP1-207ENST00000588131 CLPTM1LQ96KA5 538 aa10.66□□□□□ -0.7
VMP1-207ENST00000588131 CCDC115Q96NT0 180 aa10.66□□□□□ -0.7
VMP1-207ENST00000588131 RPF2Q9H7B2 306 aaKnown RBP10.66□□□□□ -0.7
VMP1-207ENST00000588131 SLC35C2Q9NQQ7 365 aa10.66□□□□□ -0.7
VMP1-207ENST00000588131 GID8Q9NWU2 228 aa10.66□□□□□ -0.7
VMP1-207ENST00000588131 MS4A12Q9NXJ0 267 aa10.66□□□□□ -0.7
VMP1-207ENST00000588131 TAS2R7Q9NYW3 318 aa10.66□□□□□ -0.7
VMP1-207ENST00000588131 SLC25A37Q9NYZ2 338 aa10.66□□□□□ -0.7
VMP1-207ENST00000588131 BTNL2Q9UIR0 455 aa10.66□□□□□ -0.7
VMP1-207ENST00000588131 UTS2RQ9UKP6 389 aa10.66□□□□□ -0.7
VMP1-207ENST00000588131 PACSIN3Q9UKS6 424 aa10.66□□□□□ -0.7
VMP1-207ENST00000588131 CLCA2Q9UQC9 943 aa10.66□□□□□ -0.7
VMP1-207ENST00000588131 TRBV5-3A0A0A0MS03 114 aa10.65□□□□□ -0.7
VMP1-207ENST00000588131 A0A1B0GX78 115 aa10.65□□□□□ -0.7
VMP1-207ENST00000588131 A0A1W2PRB8 838 aa10.65□□□□□ -0.7
VMP1-207ENST00000588131 PMS2P1A4D2B8 440 aa10.65□□□□□ -0.7
VMP1-207ENST00000588131 MYO1GB0I1T2 1018 aa10.65□□□□□ -0.7
VMP1-207ENST00000588131 RFXANKO14593 260 aa10.65□□□□□ -0.7
VMP1-207ENST00000588131 CSO75390 466 aaKnown RBP10.65□□□□□ -0.7
VMP1-207ENST00000588131 ERAL1O75616 437 aaKnown RBP10.65□□□□□ -0.7
VMP1-207ENST00000588131 DKK1O94907 266 aa10.65□□□□□ -0.7
VMP1-207ENST00000588131 ABCB1P08183 1280 aaPredicted RBP10.65□□□□□ -0.7
VMP1-207ENST00000588131 C8orf89P0DMQ9 161 aa10.65□□□□□ -0.7
VMP1-207ENST00000588131 NQO1P15559 274 aaKnown RBP10.65□□□□□ -0.7
VMP1-207ENST00000588131 ZNF28P17035 718 aa10.65□□□□□ -0.7
VMP1-207ENST00000588131 ITIH1P19827 911 aa10.65□□□□□ -0.7
VMP1-207ENST00000588131 SLC6A2P23975 617 aa10.65□□□□□ -0.7
VMP1-207ENST00000588131 PTGER1P34995 402 aa10.65□□□□□ -0.7
VMP1-207ENST00000588131 ETV5P41161 510 aa10.65□□□□□ -0.7
VMP1-207ENST00000588131 SKP1P63208 163 aa10.65□□□□□ -0.7
VMP1-207ENST00000588131 ID2Q02363 134 aa10.65□□□□□ -0.7
VMP1-207ENST00000588131 GAB1Q13480 694 aa10.65□□□□□ -0.7
VMP1-207ENST00000588131 SELPLGQ14242 412 aa10.65□□□□□ -0.7
VMP1-207ENST00000588131 ERV3-1Q14264 604 aa10.65□□□□□ -0.7
VMP1-207ENST00000588131 LRIF1Q5T3J3 769 aa10.65□□□□□ -0.7
VMP1-207ENST00000588131 HES3Q5TGS1 186 aa10.65□□□□□ -0.7
VMP1-207ENST00000588131 OR52E8Q6IFG1 317 aa10.65□□□□□ -0.7
VMP1-207ENST00000588131 RHBDD2Q6NTF9 364 aa10.65□□□□□ -0.7
VMP1-207ENST00000588131 BNC2Q6ZN30 1099 aaPredicted RBP10.65□□□□□ -0.7
VMP1-207ENST00000588131 PPP1R3BQ86XI6 285 aa10.65□□□□□ -0.7
VMP1-207ENST00000588131 TMEM126BQ8IUX1 230 aa10.65□□□□□ -0.7
VMP1-207ENST00000588131 OR4N5Q8IXE1 308 aa10.65□□□□□ -0.7
VMP1-207ENST00000588131 KIAA2013Q8IYS2 634 aa10.65□□□□□ -0.7
VMP1-207ENST00000588131 CLEC4FQ8N1N0 589 aa10.65□□□□□ -0.7
VMP1-207ENST00000588131 OR4A15Q8NGL6 344 aa10.65□□□□□ -0.7
VMP1-207ENST00000588131 OR51Q1Q8NH59 317 aa10.65□□□□□ -0.7
VMP1-207ENST00000588131 MVB12AQ96EY5 273 aa10.65□□□□□ -0.7
VMP1-207ENST00000588131 PANX1Q96RD7 426 aa10.65□□□□□ -0.7
VMP1-207ENST00000588131 THTPAQ9BU02 230 aa10.65□□□□□ -0.7
VMP1-207ENST00000588131 TRIM4Q9C037 500 aa10.65□□□□□ -0.7
VMP1-207ENST00000588131 NDE1Q9NXR1 346 aa10.65□□□□□ -0.7
VMP1-207ENST00000588131 VAPAQ9P0L0 249 aa10.65□□□□□ -0.7
VMP1-207ENST00000588131 GMPR2Q9P2T1 348 aaKnown RBP10.65□□□□□ -0.7
VMP1-207ENST00000588131 SRPK3Q9UPE1 567 aa10.65□□□□□ -0.7
VMP1-207ENST00000588131 LOXL2Q9Y4K0 774 aa10.65□□□□□ -0.7
VMP1-207ENST00000588131 PCDHB14Q9Y5E9 798 aa10.65□□□□□ -0.7
VMP1-207ENST00000588131 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.65□□□□□ -0.7
VMP1-207ENST00000588131 SPACA6W5XKT8 324 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms