RNA–Protein interactions for RNA: ENST00000587327.5

PRKCSH-205, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PRKCSH, Length 2,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-205ENST00000587327 NXPE4Q6UWF7 544 aa16.06■□□□□ 0.16
PRKCSH-205ENST00000587327 LIPIQ6XZB0 460 aa16.06■□□□□ 0.16
PRKCSH-205ENST00000587327 IKBIPQ70UQ0 350 aa16.06■□□□□ 0.16
PRKCSH-205ENST00000587327 ZNF784Q8NCA9 323 aaPredicted RBP16.06■□□□□ 0.16
PRKCSH-205ENST00000587327 FLCNQ8NFG4 579 aa16.06■□□□□ 0.16
PRKCSH-205ENST00000587327 IL17RDQ8NFM7 739 aa16.06■□□□□ 0.16
PRKCSH-205ENST00000587327 CYB5D2Q8WUJ1 264 aa16.06■□□□□ 0.16
PRKCSH-205ENST00000587327 SLC5A11Q8WWX8 675 aa16.06■□□□□ 0.16
PRKCSH-205ENST00000587327 PDXPQ96GD0 296 aa16.06■□□□□ 0.16
PRKCSH-205ENST00000587327 OPALINQ96PE5 141 aa16.06■□□□□ 0.16
PRKCSH-205ENST00000587327 IL4I1Q96RQ9 567 aa16.06■□□□□ 0.16
PRKCSH-205ENST00000587327 CCDC32Q9BV29 185 aa16.06■□□□□ 0.16
PRKCSH-205ENST00000587327 EPHX3Q9H6B9 360 aa16.06■□□□□ 0.16
PRKCSH-205ENST00000587327 TDP1Q9NUW8 608 aa16.06■□□□□ 0.16
PRKCSH-205ENST00000587327 TAAR2Q9P1P5 351 aa16.06■□□□□ 0.16
PRKCSH-205ENST00000587327 CRNNQ9UBG3 495 aaPredicted RBP16.06■□□□□ 0.16
PRKCSH-205ENST00000587327 ICKQ9UPZ9 632 aa16.06■□□□□ 0.16
PRKCSH-205ENST00000587327 INSL6Q9Y581 213 aa16.06■□□□□ 0.16
PRKCSH-205ENST00000587327 TRBV4-1A0A0J9YWV2 114 aa16.06■□□□□ 0.16
PRKCSH-205ENST00000587327 MMP12P39900 470 aa16.06■□□□□ 0.16
PRKCSH-205ENST00000587327 DGKEP52429 567 aa16.06■□□□□ 0.16
PRKCSH-205ENST00000587327 SNRPGP62308 76 aaKnown RBP16.06■□□□□ 0.16
PRKCSH-205ENST00000587327 RHAGQ02094 409 aa16.06■□□□□ 0.16
PRKCSH-205ENST00000587327 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.06■□□□□ 0.16
PRKCSH-205ENST00000587327 ZNF77Q15935 545 aa16.06■□□□□ 0.16
PRKCSH-205ENST00000587327 LEXMQ3ZCV2 418 aa16.06■□□□□ 0.16
PRKCSH-205ENST00000587327 LRRC56Q8IYG6 542 aaPredicted RBP16.06■□□□□ 0.16
PRKCSH-205ENST00000587327 MMP21Q8N119 569 aa16.06■□□□□ 0.16
PRKCSH-205ENST00000587327 ZNF513Q8N8E2 541 aaPredicted RBP16.06■□□□□ 0.16
PRKCSH-205ENST00000587327 OR9A1PQ8NGU1 263 aa16.06■□□□□ 0.16
PRKCSH-205ENST00000587327 MRGPRX3Q96LB0 322 aa16.06■□□□□ 0.16
PRKCSH-205ENST00000587327 CEP19Q96LK0 163 aa16.06■□□□□ 0.16
PRKCSH-205ENST00000587327 NLNQ9BYT8 704 aa16.06■□□□□ 0.16
PRKCSH-205ENST00000587327 MTG2Q9H4K7 406 aa16.06■□□□□ 0.16
PRKCSH-205ENST00000587327 CXorf36Q9H7Y0 433 aa16.06■□□□□ 0.16
PRKCSH-205ENST00000587327 C3orf14Q9HBI5 128 aa16.06■□□□□ 0.16
PRKCSH-205ENST00000587327 MOV10Q9HCE1 1003 aaKnown RBP16.06■□□□□ 0.16
PRKCSH-205ENST00000587327 HHATLQ9HCP6 504 aa16.06■□□□□ 0.16
PRKCSH-205ENST00000587327 MIEF1Q9NQG6 463 aa16.06■□□□□ 0.16
PRKCSH-205ENST00000587327 SPHK2Q9NRA0 654 aa16.06■□□□□ 0.16
PRKCSH-205ENST00000587327 FBXL12Q9NXK8 326 aa16.06■□□□□ 0.16
PRKCSH-205ENST00000587327 REV1Q9UBZ9 1251 aa16.06■□□□□ 0.16
PRKCSH-205ENST00000587327 KLHL3Q9UH77 587 aa16.06■□□□□ 0.16
PRKCSH-205ENST00000587327 IL36AQ9UHA7 158 aa16.06■□□□□ 0.16
PRKCSH-205ENST00000587327 HCFC2Q9Y5Z7 792 aa16.06■□□□□ 0.16
PRKCSH-205ENST00000587327 PDZK1P1A8MUH7 402 aa16.05■□□□□ 0.16
PRKCSH-205ENST00000587327 ADAP00813 363 aa16.05■□□□□ 0.16
PRKCSH-205ENST00000587327 OSMP13725 252 aa16.05■□□□□ 0.16
PRKCSH-205ENST00000587327 CD72P21854 359 aa16.05■□□□□ 0.16
PRKCSH-205ENST00000587327 TNFSF8P32971 234 aa16.05■□□□□ 0.16
PRKCSH-205ENST00000587327 TIE1P35590 1138 aa16.05■□□□□ 0.16
PRKCSH-205ENST00000587327 GRIN2CQ14957 1233 aa16.05■□□□□ 0.16
PRKCSH-205ENST00000587327 LY6G5CQ5SRR4 150 aa16.05■□□□□ 0.16
PRKCSH-205ENST00000587327 CEACAM20Q6UY09 585 aa16.05■□□□□ 0.16
PRKCSH-205ENST00000587327 CELF2-AS1Q8N7Q2 184 aa16.05■□□□□ 0.16
PRKCSH-205ENST00000587327 ZNF740Q8NDX6 193 aa16.05■□□□□ 0.16
PRKCSH-205ENST00000587327 ARMC5Q96C12 935 aa16.05■□□□□ 0.16
PRKCSH-205ENST00000587327 SIAEQ9HAT2 523 aa16.05■□□□□ 0.16
PRKCSH-205ENST00000587327 C14orf119Q9NWQ9 140 aa16.05■□□□□ 0.16
PRKCSH-205ENST00000587327 ERVK13-1Q9NX77 482 aa16.05■□□□□ 0.16
PRKCSH-205ENST00000587327 TRAPPC4Q9Y296 219 aa16.05■□□□□ 0.16
PRKCSH-205ENST00000587327 LSM2Q9Y333 95 aaKnown RBP16.05■□□□□ 0.16
PRKCSH-205ENST00000587327 TLR4O00206 839 aa16.04■□□□□ 0.16
PRKCSH-205ENST00000587327 PTPN2P17706 415 aa16.04■□□□□ 0.16
PRKCSH-205ENST00000587327 CSTF2P33240 577 aaKnown RBP eCLIP16.04■□□□□ 0.16
PRKCSH-205ENST00000587327 CTNNB1P35222 781 aa16.04■□□□□ 0.16
PRKCSH-205ENST00000587327 NKX2-5P52952 324 aaPredicted RBP16.04■□□□□ 0.16
PRKCSH-205ENST00000587327 NTHL1P78549 312 aa16.04■□□□□ 0.16
PRKCSH-205ENST00000587327 ILKQ13418 452 aa16.04■□□□□ 0.16
PRKCSH-205ENST00000587327 SF3B4Q15427 424 aaKnown RBP eCLIP16.04■□□□□ 0.167e-7■■■■□ 21.5
PRKCSH-205ENST00000587327 FAM180BQ6P0A1 224 aa16.04■□□□□ 0.16
PRKCSH-205ENST00000587327 SLC38A5Q8WUX1 472 aa16.04■□□□□ 0.16
PRKCSH-205ENST00000587327 CNPPD1Q9BV87 410 aa16.04■□□□□ 0.16
PRKCSH-205ENST00000587327 ASPNQ9BXN1 380 aa16.04■□□□□ 0.16
PRKCSH-205ENST00000587327 UCK2Q9BZX2 261 aa16.04■□□□□ 0.16
PRKCSH-205ENST00000587327 C11orf16Q9NQ32 467 aa16.04■□□□□ 0.16
PRKCSH-205ENST00000587327 SPATA7Q9P0W8 599 aa16.04■□□□□ 0.16
PRKCSH-205ENST00000587327 DKK3Q9UBP4 350 aa16.04■□□□□ 0.16
PRKCSH-205ENST00000587327 NDOR1Q9UHB4 597 aa16.04■□□□□ 0.16
PRKCSH-205ENST00000587327 TMCC3Q9ULS5 477 aa16.04■□□□□ 0.16
PRKCSH-205ENST00000587327 LAMA3Q16787 3333 aa16.04■□□□□ 0.16
PRKCSH-205ENST00000587327 PSMD11O00231 422 aa16.04■□□□□ 0.16
PRKCSH-205ENST00000587327 FGF19O95750 216 aa16.04■□□□□ 0.16
PRKCSH-205ENST00000587327 SYN1P17600 705 aa16.04■□□□□ 0.16
PRKCSH-205ENST00000587327 IRS1P35568 1242 aa16.04■□□□□ 0.16
PRKCSH-205ENST00000587327 RPS19P39019 145 aaKnown RBP16.04■□□□□ 0.16
PRKCSH-205ENST00000587327 NNMTP40261 264 aa16.04■□□□□ 0.16
PRKCSH-205ENST00000587327 ARHGAP15Q53QZ3 475 aa16.04■□□□□ 0.16
PRKCSH-205ENST00000587327 RPS26P11Q5JNZ5 115 aaPredicted RBP16.04■□□□□ 0.16
PRKCSH-205ENST00000587327 AGAP6Q5VW22 663 aa16.04■□□□□ 0.16
PRKCSH-205ENST00000587327 ERAP2Q6P179 960 aa16.04■□□□□ 0.16
PRKCSH-205ENST00000587327 FAM92BQ6ZTR7 304 aa16.04■□□□□ 0.16
PRKCSH-205ENST00000587327 SPATC1Q76KD6 591 aa16.04■□□□□ 0.16
PRKCSH-205ENST00000587327 NRSN1Q8IZ57 195 aa16.04■□□□□ 0.16
PRKCSH-205ENST00000587327 SLC7A5P1Q8MH63 180 aa16.04■□□□□ 0.16
PRKCSH-205ENST00000587327 ZNF557Q8N988 423 aaPredicted RBP16.04■□□□□ 0.16
PRKCSH-205ENST00000587327 ST13P5Q8NFI4 369 aaPredicted RBP16.04■□□□□ 0.16
PRKCSH-205ENST00000587327 SP7Q8TDD2 431 aaPredicted RBP16.04■□□□□ 0.16
PRKCSH-205ENST00000587327 POF1BQ8WVV4 589 aa16.04■□□□□ 0.16
PRKCSH-205ENST00000587327 KLHL6Q8WZ60 621 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms