RNA–Protein interactions for RNA: ENST00000587167.1

SPHK1-204, Transcript of sphingosine kinase 1, humanhuman

TSL 4

Gene SPHK1, Length 456 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-204ENST00000587167 NR6A1Q15406 480 aa18.39■□□□□ 0.53
SPHK1-204ENST00000587167 PDCD2Q16342 344 aaPredicted RBP18.39■□□□□ 0.53
SPHK1-204ENST00000587167 MED25Q71SY5 747 aa18.39■□□□□ 0.53
SPHK1-204ENST00000587167 PPP1R32Q7Z5V6 425 aa18.39■□□□□ 0.53
SPHK1-204ENST00000587167 KIRREL3Q8IZU9 778 aa18.39■□□□□ 0.53
SPHK1-204ENST00000587167 ARFGAP2Q8N6H7 521 aa18.39■□□□□ 0.53
SPHK1-204ENST00000587167 MS4A12Q9NXJ0 267 aa18.39■□□□□ 0.53
SPHK1-204ENST00000587167 MCM8Q9UJA3 840 aa18.39■□□□□ 0.53
SPHK1-204ENST00000587167 ATG4BQ9Y4P1 393 aa18.39■□□□□ 0.53
SPHK1-204ENST00000587167 HS3ST3B1Q9Y662 390 aa18.39■□□□□ 0.53
SPHK1-204ENST00000587167 DOCK10Q96BY6 2186 aa18.39■□□□□ 0.53
SPHK1-204ENST00000587167 PROM1O43490 865 aa18.38■□□□□ 0.53
SPHK1-204ENST00000587167 PCDH7O60245 1069 aa18.38■□□□□ 0.53
SPHK1-204ENST00000587167 PRMT3O60678 531 aa18.38■□□□□ 0.53
SPHK1-204ENST00000587167 SEC22BO75396 215 aa18.38■□□□□ 0.53
SPHK1-204ENST00000587167 MAPK12P53778 367 aa18.38■□□□□ 0.53
SPHK1-204ENST00000587167 TNFRSF17Q02223 184 aa18.38■□□□□ 0.53
SPHK1-204ENST00000587167 C18orf63Q68DL7 685 aa18.38■□□□□ 0.53
SPHK1-204ENST00000587167 QSOX2Q6ZRP7 698 aa18.38■□□□□ 0.53
SPHK1-204ENST00000587167 ZNF595Q8IYB9 648 aa18.38■□□□□ 0.53
SPHK1-204ENST00000587167 PLPP5Q8NEB5 264 aa18.38■□□□□ 0.53
SPHK1-204ENST00000587167 CKAP2Q8WWK9 683 aa18.38■□□□□ 0.53
SPHK1-204ENST00000587167 METTL21AQ8WXB1 218 aa18.38■□□□□ 0.53
SPHK1-204ENST00000587167 C3orf30Q96M34 536 aa18.38■□□□□ 0.53
SPHK1-204ENST00000587167 MAGEB18Q96M61 343 aa18.38■□□□□ 0.53
SPHK1-204ENST00000587167 PTCHD1Q96NR3 888 aa18.38■□□□□ 0.53
SPHK1-204ENST00000587167 LRTM1Q9HBL6 345 aa18.38■□□□□ 0.53
SPHK1-204ENST00000587167 PRTFDC1Q9NRG1 225 aa18.38■□□□□ 0.53
SPHK1-204ENST00000587167 C1orf109Q9NX04 203 aa18.38■□□□□ 0.53
SPHK1-204ENST00000587167 POLHQ9Y253 713 aa18.38■□□□□ 0.53
SPHK1-204ENST00000587167 GNG14A0A1W2PPG7 69 aa18.37■□□□□ 0.53
SPHK1-204ENST00000587167 NPIPB8E9PQR5 432 aa18.37■□□□□ 0.53
SPHK1-204ENST00000587167 CLDN4O14493 209 aa18.37■□□□□ 0.53
SPHK1-204ENST00000587167 SOCS6O14544 535 aa18.37■□□□□ 0.53
SPHK1-204ENST00000587167 PRKRAO75569 313 aaKnown RBP18.37■□□□□ 0.53
SPHK1-204ENST00000587167 JUNP05412 331 aaKnown RBP18.37■□□□□ 0.53
SPHK1-204ENST00000587167 CYC1P08574 325 aa18.37■□□□□ 0.53
SPHK1-204ENST00000587167 C8orf89P0DMQ9 161 aa18.37■□□□□ 0.53
SPHK1-204ENST00000587167 KITP10721 976 aa18.37■□□□□ 0.53
SPHK1-204ENST00000587167 TLX1P31314 330 aaPredicted RBP18.37■□□□□ 0.53
SPHK1-204ENST00000587167 TIA1P31483 386 aaKnown RBP eCLIP18.37■□□□□ 0.53
SPHK1-204ENST00000587167 BUD31P41223 144 aaPredicted RBP18.37■□□□□ 0.53
SPHK1-204ENST00000587167 FOXK1P85037 733 aa18.37■□□□□ 0.53
SPHK1-204ENST00000587167 SLC13A2Q13183 592 aa18.37■□□□□ 0.53
SPHK1-204ENST00000587167 ATP1A4Q13733 1029 aa18.37■□□□□ 0.53
SPHK1-204ENST00000587167 GALNTL6Q49A17 601 aa18.37■□□□□ 0.53
SPHK1-204ENST00000587167 XKR7Q5GH72 579 aa18.37■□□□□ 0.53
SPHK1-204ENST00000587167 COLEC12Q5KU26 742 aa18.37■□□□□ 0.53
SPHK1-204ENST00000587167 TMEM205Q6UW68 189 aa18.37■□□□□ 0.53
SPHK1-204ENST00000587167 LANCL3Q6ZV70 420 aa18.37■□□□□ 0.53
SPHK1-204ENST00000587167 MRGPREQ86SM8 312 aa18.37■□□□□ 0.53
SPHK1-204ENST00000587167 THAP4Q8WY91 577 aa18.37■□□□□ 0.53
SPHK1-204ENST00000587167 TSLPQ969D9 159 aa18.37■□□□□ 0.53
SPHK1-204ENST00000587167 NACC2Q96BF6 587 aa18.37■□□□□ 0.53
SPHK1-204ENST00000587167 C8orf44Q96CB5 159 aa18.37■□□□□ 0.53
SPHK1-204ENST00000587167 C19orf60Q96EN9 201 aa18.37■□□□□ 0.53
SPHK1-204ENST00000587167 C11orf24Q96F05 449 aaPredicted RBP18.37■□□□□ 0.53
SPHK1-204ENST00000587167 PPP1R36Q96LQ0 422 aa18.37■□□□□ 0.53
SPHK1-204ENST00000587167 IP6K3Q96PC2 410 aa18.37■□□□□ 0.53
SPHK1-204ENST00000587167 CCT7Q99832 543 aa18.37■□□□□ 0.53
SPHK1-204ENST00000587167 MESP1Q9BRJ9 268 aa18.37■□□□□ 0.53
SPHK1-204ENST00000587167 EBPLQ9BY08 206 aa18.37■□□□□ 0.53
SPHK1-204ENST00000587167 PFDN4Q9NQP4 134 aa18.37■□□□□ 0.53
SPHK1-204ENST00000587167 PRDM9Q9NQV7 894 aa18.37■□□□□ 0.53
SPHK1-204ENST00000587167 SIRT5Q9NXA8 310 aa18.37■□□□□ 0.53
SPHK1-204ENST00000587167 TEX10Q9NXF1 929 aaPredicted RBP18.37■□□□□ 0.53
SPHK1-204ENST00000587167 MARCOQ9UEW3 520 aaPredicted RBP18.37■□□□□ 0.53
SPHK1-204ENST00000587167 MMACHCQ9Y4U1 282 aa18.37■□□□□ 0.53
SPHK1-204ENST00000587167 PTPN13Q12923 2485 aa18.37■□□□□ 0.53
SPHK1-204ENST00000587167 ATP6AP2A0A1C7CYW4 349 aa18.36■□□□□ 0.53
SPHK1-204ENST00000587167 A0A1W2PR48 441 aa18.36■□□□□ 0.53
SPHK1-204ENST00000587167 BLACEA4D250 179 aa18.36■□□□□ 0.53
SPHK1-204ENST00000587167 PEX12O00623 359 aa18.36■□□□□ 0.53
SPHK1-204ENST00000587167 LSM1O15116 133 aaKnown RBP18.36■□□□□ 0.53
SPHK1-204ENST00000587167 ATP6AP2O75787 350 aa18.36■□□□□ 0.53
SPHK1-204ENST00000587167 MYO1DO94832 1006 aa18.36■□□□□ 0.53
SPHK1-204ENST00000587167 MAOAP21397 527 aa18.36■□□□□ 0.53
SPHK1-204ENST00000587167 HSD17B7P56937 341 aa18.36■□□□□ 0.53
SPHK1-204ENST00000587167 EEF1A2Q05639 463 aaKnown RBP18.36■□□□□ 0.53
SPHK1-204ENST00000587167 KIAA0040Q15053 153 aa18.36■□□□□ 0.53
SPHK1-204ENST00000587167 NSDHLQ15738 373 aa18.36■□□□□ 0.53
SPHK1-204ENST00000587167 LACTB2Q53H82 288 aaPredicted RBP18.36■□□□□ 0.53
SPHK1-204ENST00000587167 GALNT18Q6P9A2 607 aa18.36■□□□□ 0.53
SPHK1-204ENST00000587167 KIRREL2Q6UWL6 708 aa18.36■□□□□ 0.53
SPHK1-204ENST00000587167 CLNKQ7Z7G1 428 aa18.36■□□□□ 0.53
SPHK1-204ENST00000587167 TM4SF18Q96CE8 201 aa18.36■□□□□ 0.53
SPHK1-204ENST00000587167 METTL2AQ96IZ6 378 aaKnown RBP18.36■□□□□ 0.53
SPHK1-204ENST00000587167 RPF2Q9H7B2 306 aaKnown RBP18.36■□□□□ 0.53
SPHK1-204ENST00000587167 NECTIN3Q9NQS3 549 aa18.36■□□□□ 0.53
SPHK1-204ENST00000587167 RIC8BQ9NVN3 520 aa18.36■□□□□ 0.53
SPHK1-204ENST00000587167 P4HTMQ9NXG6 502 aa18.36■□□□□ 0.53
SPHK1-204ENST00000587167 GIMAP2Q9UG22 337 aa18.36■□□□□ 0.53
SPHK1-204ENST00000587167 MAN2B2Q9Y2E5 1009 aa18.36■□□□□ 0.53
SPHK1-204ENST00000587167 POLR3HQ9Y535 204 aaPredicted RBP18.36■□□□□ 0.53
SPHK1-204ENST00000587167 FLNCQ14315 2725 aa18.36■□□□□ 0.53
SPHK1-204ENST00000587167 PCDH17O14917 1159 aa18.35■□□□□ 0.53
SPHK1-204ENST00000587167 CTNSO60931 367 aa18.35■□□□□ 0.53
SPHK1-204ENST00000587167 LDB3O75112 727 aa18.35■□□□□ 0.53
SPHK1-204ENST00000587167 PEX11AO75192 247 aa18.35■□□□□ 0.53
SPHK1-204ENST00000587167 GUCY1B2O75343 617 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms