RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 MAGOHP61326 146 aaKnown RBP12.94□□□□□ -0.34
PRKCSH-202ENST00000585540 PLIN5Q00G26 463 aa12.94□□□□□ -0.34
PRKCSH-202ENST00000585540 Q0VFX4 171 aa12.94□□□□□ -0.34
PRKCSH-202ENST00000585540 MPP2Q14168 576 aa12.94□□□□□ -0.34
PRKCSH-202ENST00000585540 TTMPQ5BVD1 217 aa12.94□□□□□ -0.34
PRKCSH-202ENST00000585540 ABHD17BQ5VST6 288 aa12.94□□□□□ -0.34
PRKCSH-202ENST00000585540 OR52E8Q6IFG1 317 aa12.94□□□□□ -0.34
PRKCSH-202ENST00000585540 Q6ZS92 163 aa12.94□□□□□ -0.34
PRKCSH-202ENST00000585540 SAMD14Q8IZD0 417 aaPredicted RBP12.94□□□□□ -0.34
PRKCSH-202ENST00000585540 MORN4Q8NDC4 146 aa12.94□□□□□ -0.34
PRKCSH-202ENST00000585540 B3GNT7Q8NFL0 401 aa12.94□□□□□ -0.34
PRKCSH-202ENST00000585540 FAM76AQ8TAV0 307 aa12.94□□□□□ -0.34
PRKCSH-202ENST00000585540 ELP5Q8TE02 316 aa12.94□□□□□ -0.34
PRKCSH-202ENST00000585540 VMP1Q96GC9 406 aa12.94□□□□□ -0.34
PRKCSH-202ENST00000585540 CCT7Q99832 543 aa12.94□□□□□ -0.34
PRKCSH-202ENST00000585540 MAPKAP1Q9BPZ7 522 aa12.94□□□□□ -0.34
PRKCSH-202ENST00000585540 FAIM2Q9BWQ8 316 aa12.94□□□□□ -0.34
PRKCSH-202ENST00000585540 VIPAS39Q9H9C1 493 aa12.94□□□□□ -0.34
PRKCSH-202ENST00000585540 KCNK13Q9HB14 408 aa12.94□□□□□ -0.34
PRKCSH-202ENST00000585540 PFDN4Q9NQP4 134 aa12.94□□□□□ -0.34
PRKCSH-202ENST00000585540 NECTIN3Q9NQS3 549 aa12.94□□□□□ -0.34
PRKCSH-202ENST00000585540 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.94□□□□□ -0.34
PRKCSH-202ENST00000585540 MCM8Q9UJA3 840 aa12.94□□□□□ -0.34
PRKCSH-202ENST00000585540 B3GNT3Q9Y2A9 372 aa12.94□□□□□ -0.34
PRKCSH-202ENST00000585540 ATRXP46100 2492 aa12.94□□□□□ -0.34
PRKCSH-202ENST00000585540 SCN2AQ99250 2005 aa12.93□□□□□ -0.34
PRKCSH-202ENST00000585540 C1orf226A1L170 272 aa12.93□□□□□ -0.34
PRKCSH-202ENST00000585540 BIRC5O15392 142 aa12.93□□□□□ -0.34
PRKCSH-202ENST00000585540 PROM1O43490 865 aa12.93□□□□□ -0.34
PRKCSH-202ENST00000585540 RSL1D1O76021 490 aaKnown RBP12.93□□□□□ -0.34
PRKCSH-202ENST00000585540 ETHE1O95571 254 aa12.93□□□□□ -0.34
PRKCSH-202ENST00000585540 PDGFAP04085 211 aa12.93□□□□□ -0.34
PRKCSH-202ENST00000585540 PRB1P04280 392 aa12.93□□□□□ -0.34
PRKCSH-202ENST00000585540 MAOAP21397 527 aa12.93□□□□□ -0.34
PRKCSH-202ENST00000585540 STT3AP46977 705 aa12.93□□□□□ -0.34
PRKCSH-202ENST00000585540 CLCN2P51788 898 aa12.93□□□□□ -0.34
PRKCSH-202ENST00000585540 NEK2P51955 445 aa12.93□□□□□ -0.34
PRKCSH-202ENST00000585540 MAPK12P53778 367 aa12.93□□□□□ -0.34
PRKCSH-202ENST00000585540 SLC18A1P54219 525 aa12.93□□□□□ -0.34
PRKCSH-202ENST00000585540 BTG2P78543 158 aa12.93□□□□□ -0.34
PRKCSH-202ENST00000585540 ACSM2AQ08AH3 577 aa12.93□□□□□ -0.34
PRKCSH-202ENST00000585540 TLR1Q15399 786 aa12.93□□□□□ -0.34
PRKCSH-202ENST00000585540 AGBL2Q5U5Z8 902 aa12.93□□□□□ -0.34
PRKCSH-202ENST00000585540 ACSM2BQ68CK6 577 aa12.93□□□□□ -0.34
PRKCSH-202ENST00000585540 RPUSD3Q6P087 351 aaKnown RBP12.93□□□□□ -0.34
PRKCSH-202ENST00000585540 GALNT18Q6P9A2 607 aa12.93□□□□□ -0.34
PRKCSH-202ENST00000585540 TMEM151BQ8IW70 566 aa12.93□□□□□ -0.34
PRKCSH-202ENST00000585540 ST13P4Q8IZP2 240 aaPredicted RBP12.93□□□□□ -0.34
PRKCSH-202ENST00000585540 ARMC10Q8N2F6 343 aa12.93□□□□□ -0.34
PRKCSH-202ENST00000585540 RNF175Q8N4F7 328 aa12.93□□□□□ -0.34
PRKCSH-202ENST00000585540 HORMAD2Q8N7B1 307 aa12.93□□□□□ -0.34
PRKCSH-202ENST00000585540 OR8K3Q8NH51 312 aa12.93□□□□□ -0.34
PRKCSH-202ENST00000585540 BRIX1Q8TDN6 353 aaKnown RBP12.93□□□□□ -0.34
PRKCSH-202ENST00000585540 PSMF1Q92530 271 aa12.93□□□□□ -0.34
PRKCSH-202ENST00000585540 HAS2Q92819 552 aa12.93□□□□□ -0.34
PRKCSH-202ENST00000585540 CSF3RQ99062 836 aa12.93□□□□□ -0.34
PRKCSH-202ENST00000585540 SH3GL2Q99962 352 aa12.93□□□□□ -0.34
PRKCSH-202ENST00000585540 GATA5Q9BWX5 397 aaPredicted RBP12.93□□□□□ -0.34
PRKCSH-202ENST00000585540 KCNK9Q9NPC2 374 aa12.93□□□□□ -0.34
PRKCSH-202ENST00000585540 ZNF446Q9NWS9 450 aa12.93□□□□□ -0.34
PRKCSH-202ENST00000585540 FBXW2Q9UKT8 454 aa12.93□□□□□ -0.34
PRKCSH-202ENST00000585540 PSME2Q9UL46 239 aa12.93□□□□□ -0.34
PRKCSH-202ENST00000585540 ASB4Q9Y574 426 aa12.93□□□□□ -0.34
PRKCSH-202ENST00000585540 PCDHGB6Q9Y5F9 930 aa12.93□□□□□ -0.34
PRKCSH-202ENST00000585540 CLCA3PQ9Y6N3 262 aa12.93□□□□□ -0.34
PRKCSH-202ENST00000585540 CPAMD8Q8IZJ3 1885 aa12.93□□□□□ -0.34
PRKCSH-202ENST00000585540 TMEM120BA0PK00 339 aa12.92□□□□□ -0.34
PRKCSH-202ENST00000585540 FAM227AF5H4B4 570 aa12.92□□□□□ -0.34
PRKCSH-202ENST00000585540 SLC28A1O00337 649 aa12.92□□□□□ -0.34
PRKCSH-202ENST00000585540 SAP18O00422 153 aaKnown RBP12.92□□□□□ -0.34
PRKCSH-202ENST00000585540 SLC28A2O43868 658 aa12.92□□□□□ -0.34
PRKCSH-202ENST00000585540 DNAJB6O75190 326 aa12.92□□□□□ -0.34
PRKCSH-202ENST00000585540 SORBS2O94875 1100 aaKnown RBP12.92□□□□□ -0.34
PRKCSH-202ENST00000585540 BPGMP07738 259 aa12.92□□□□□ -0.34
PRKCSH-202ENST00000585540 FGF4P08620 206 aa12.92□□□□□ -0.34
PRKCSH-202ENST00000585540 ITGAMP11215 1152 aa12.92□□□□□ -0.34
PRKCSH-202ENST00000585540 PRPH2P23942 346 aa12.92□□□□□ -0.34
PRKCSH-202ENST00000585540 HNRNPH2P55795 449 aaKnown RBP12.92□□□□□ -0.34
PRKCSH-202ENST00000585540 TBL3Q12788 808 aaKnown RBP12.92□□□□□ -0.34
PRKCSH-202ENST00000585540 IMPG1Q17R60 797 aa12.92□□□□□ -0.34
PRKCSH-202ENST00000585540 SPRED3Q2MJR0 410 aa12.92□□□□□ -0.34
PRKCSH-202ENST00000585540 CCNYL2Q5T2Q4 361 aa12.92□□□□□ -0.34
PRKCSH-202ENST00000585540 SLC6A19Q695T7 634 aa12.92□□□□□ -0.34
PRKCSH-202ENST00000585540 ZCCHC23Q6ZST2 131 aa12.92□□□□□ -0.34
PRKCSH-202ENST00000585540 COMMD6Q7Z4G1 85 aa12.92□□□□□ -0.34
PRKCSH-202ENST00000585540 TRIM46Q7Z4K8 759 aa12.92□□□□□ -0.34
PRKCSH-202ENST00000585540 SHISA5Q8N114 240 aa12.92□□□□□ -0.34
PRKCSH-202ENST00000585540 RBMXL3Q8N7X1 1067 aaKnown RBP12.92□□□□□ -0.34
PRKCSH-202ENST00000585540 ANKRD42Q8N9B4 389 aa12.92□□□□□ -0.34
PRKCSH-202ENST00000585540 SUN3Q8TAQ9 357 aa12.92□□□□□ -0.34
PRKCSH-202ENST00000585540 CHTF18Q8WVB6 975 aa12.92□□□□□ -0.34
PRKCSH-202ENST00000585540 MTFMTQ96DP5 389 aaKnown RBP12.92□□□□□ -0.34
PRKCSH-202ENST00000585540 DGAT2Q96PD7 388 aa12.92□□□□□ -0.34
PRKCSH-202ENST00000585540 ALOXE3Q9BYJ1 711 aa12.92□□□□□ -0.34
PRKCSH-202ENST00000585540 ILKAPQ9H0C8 392 aaPredicted RBP12.92□□□□□ -0.34
PRKCSH-202ENST00000585540 SLAMF7Q9NQ25 335 aa12.92□□□□□ -0.34
PRKCSH-202ENST00000585540 COPS7AQ9UBW8 275 aa12.92□□□□□ -0.34
PRKCSH-202ENST00000585540 CLDN16Q9Y5I7 305 aa12.92□□□□□ -0.34
PRKCSH-202ENST00000585540 TRAV17A0A0B4J275 112 aa12.91□□□□□ -0.34
PRKCSH-202ENST00000585540 FCHO1O14526 889 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms