RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 RPS15P62841 145 aaKnown RBP17.25■□□□□ 0.35
RFFL-211ENST00000584541 MC1RQ01726 317 aa17.25■□□□□ 0.35
RFFL-211ENST00000584541 NCF4Q15080 339 aa17.25■□□□□ 0.35
RFFL-211ENST00000584541 TBC1D25Q3MII6 688 aa17.25■□□□□ 0.35
RFFL-211ENST00000584541 MINDY4Q4G0A6 757 aa17.25■□□□□ 0.35
RFFL-211ENST00000584541 VWA2Q5GFL6 755 aa17.25■□□□□ 0.35
RFFL-211ENST00000584541 LCN10Q6JVE6 187 aa17.25■□□□□ 0.35
RFFL-211ENST00000584541 MRPL14Q6P1L8 145 aaKnown RBP17.25■□□□□ 0.35
RFFL-211ENST00000584541 FAM198BQ6UWH4 519 aa17.25■□□□□ 0.35
RFFL-211ENST00000584541 RIPOR1Q6ZS17 1223 aa17.25■□□□□ 0.35
RFFL-211ENST00000584541 MED25Q71SY5 747 aa17.25■□□□□ 0.35
RFFL-211ENST00000584541 CPSF7Q8N684 471 aaKnown RBP17.25■□□□□ 0.35
RFFL-211ENST00000584541 IL22RA1Q8N6P7 574 aa17.25■□□□□ 0.35
RFFL-211ENST00000584541 GLB1L3Q8NCI6 653 aaPredicted RBP17.25■□□□□ 0.35
RFFL-211ENST00000584541 C7orf57Q8NEG2 295 aa17.25■□□□□ 0.35
RFFL-211ENST00000584541 PPCDCQ96CD2 204 aa17.25■□□□□ 0.35
RFFL-211ENST00000584541 FAM117AQ9C073 453 aa17.25■□□□□ 0.35
RFFL-211ENST00000584541 AKIRIN1Q9H9L7 192 aaPredicted RBP17.25■□□□□ 0.35
RFFL-211ENST00000584541 PRTFDC1Q9NRG1 225 aa17.25■□□□□ 0.35
RFFL-211ENST00000584541 ATAD3AQ9NVI7 634 aa17.25■□□□□ 0.35
RFFL-211ENST00000584541 GLOD5A6NK44 160 aa17.24■□□□□ 0.35
RFFL-211ENST00000584541 FCHO1O14526 889 aa17.24■□□□□ 0.35
RFFL-211ENST00000584541 SCAMP2O15127 329 aaKnown RBP17.24■□□□□ 0.35
RFFL-211ENST00000584541 CDC123O75794 336 aaPredicted RBP17.24■□□□□ 0.35
RFFL-211ENST00000584541 FURINP09958 794 aa17.24■□□□□ 0.35
RFFL-211ENST00000584541 GPX3P22352 226 aa17.24■□□□□ 0.35
RFFL-211ENST00000584541 ADSLP30566 484 aaPredicted RBP17.24■□□□□ 0.35
RFFL-211ENST00000584541 STAT5AP42229 794 aa17.24■□□□□ 0.35
RFFL-211ENST00000584541 HSD17B7P56937 341 aa17.24■□□□□ 0.35
RFFL-211ENST00000584541 UFM1P61960 85 aa17.24■□□□□ 0.35
RFFL-211ENST00000584541 SLC13A2Q13183 592 aa17.24■□□□□ 0.35
RFFL-211ENST00000584541 ERV3-1Q14264 604 aa17.24■□□□□ 0.35
RFFL-211ENST00000584541 NKG7Q16617 165 aa17.24■□□□□ 0.35
RFFL-211ENST00000584541 DPY19L1Q2PZI1 675 aa17.24■□□□□ 0.35
RFFL-211ENST00000584541 SLC48A1Q6P1K1 146 aa17.24■□□□□ 0.35
RFFL-211ENST00000584541 MTDHQ86UE4 582 aaKnown RBP17.24■□□□□ 0.35
RFFL-211ENST00000584541 TICAM1Q8IUC6 712 aa17.24■□□□□ 0.35
RFFL-211ENST00000584541 KRTCAP2Q8N6L1 136 aa17.24■□□□□ 0.35
RFFL-211ENST00000584541 CT55Q8WUE5 264 aa17.24■□□□□ 0.35
RFFL-211ENST00000584541 ZNF385DQ9H6B1 395 aa17.24■□□□□ 0.35
RFFL-211ENST00000584541 SAR1AQ9NR31 198 aa17.24■□□□□ 0.35
RFFL-211ENST00000584541 GIMAP4Q9NUV9 329 aa17.24■□□□□ 0.35
RFFL-211ENST00000584541 TMEM45AQ9NWC5 275 aa17.24■□□□□ 0.35
RFFL-211ENST00000584541 SH3BP4Q9P0V3 963 aa17.24■□□□□ 0.35
RFFL-211ENST00000584541 ATP6V1HQ9UI12 483 aa17.24■□□□□ 0.35
RFFL-211ENST00000584541 UTS2RQ9UKP6 389 aa17.24■□□□□ 0.35
RFFL-211ENST00000584541 MMACHCQ9Y4U1 282 aa17.24■□□□□ 0.35
RFFL-211ENST00000584541 VSTM2BA6NLU5 285 aa17.23■□□□□ 0.35
RFFL-211ENST00000584541 C21orf140B9A014 251 aa17.23■□□□□ 0.35
RFFL-211ENST00000584541 ANKRD28O15084 1053 aa17.23■□□□□ 0.35
RFFL-211ENST00000584541 PGRMC2O15173 223 aa17.23■□□□□ 0.35
RFFL-211ENST00000584541 TBX19O60806 448 aa17.23■□□□□ 0.35
RFFL-211ENST00000584541 CTNSO60931 367 aa17.23■□□□□ 0.35
RFFL-211ENST00000584541 JRKO75564 520 aa17.23■□□□□ 0.35
RFFL-211ENST00000584541 PRKRAO75569 313 aaKnown RBP17.23■□□□□ 0.35
RFFL-211ENST00000584541 HEXBP07686 556 aa17.23■□□□□ 0.35
RFFL-211ENST00000584541 PIK3R1P27986 724 aa17.23■□□□□ 0.35
RFFL-211ENST00000584541 DLSTP36957 453 aa17.23■□□□□ 0.35
RFFL-211ENST00000584541 SRSF11Q05519 484 aaKnown RBP17.23■□□□□ 0.35
RFFL-211ENST00000584541 STX4Q12846 297 aa17.23■□□□□ 0.35
RFFL-211ENST00000584541 CPTPQ5TA50 214 aa17.23■□□□□ 0.35
RFFL-211ENST00000584541 PAOXQ6QHF9 649 aa17.23■□□□□ 0.35
RFFL-211ENST00000584541 QSOX2Q6ZRP7 698 aa17.23■□□□□ 0.35
RFFL-211ENST00000584541 RIMKLAQ8IXN7 391 aa17.23■□□□□ 0.35
RFFL-211ENST00000584541 PRSS58Q8IYP2 241 aa17.23■□□□□ 0.35
RFFL-211ENST00000584541 SAMD14Q8IZD0 417 aaPredicted RBP17.23■□□□□ 0.35
RFFL-211ENST00000584541 MMP21Q8N119 569 aa17.23■□□□□ 0.35
RFFL-211ENST00000584541 NATD1Q8N6N6 113 aa17.23■□□□□ 0.35
RFFL-211ENST00000584541 OR4K14Q8NGD5 310 aa17.23■□□□□ 0.35
RFFL-211ENST00000584541 DNAJB14Q8TBM8 379 aa17.23■□□□□ 0.35
RFFL-211ENST00000584541 NKD1Q969G9 470 aa17.23■□□□□ 0.35
RFFL-211ENST00000584541 KIAA1143Q96AT1 154 aaPredicted RBP17.23■□□□□ 0.35
RFFL-211ENST00000584541 TESCQ96BS2 214 aa17.23■□□□□ 0.35
RFFL-211ENST00000584541 KLHL29Q96CT2 875 aa17.23■□□□□ 0.35
RFFL-211ENST00000584541 ZNF764Q96H86 408 aaPredicted RBP17.23■□□□□ 0.35
RFFL-211ENST00000584541 LRRC37BQ96QE4 947 aa17.23■□□□□ 0.35
RFFL-211ENST00000584541 GPR87Q9BY21 358 aa17.23■□□□□ 0.35
RFFL-211ENST00000584541 NMUR2Q9GZQ4 415 aa17.23■□□□□ 0.35
RFFL-211ENST00000584541 ACTL8Q9H568 366 aa17.23■□□□□ 0.35
RFFL-211ENST00000584541 CLMPQ9H6B4 373 aa17.23■□□□□ 0.35
RFFL-211ENST00000584541 SOX17Q9H6I2 414 aaPredicted RBP17.23■□□□□ 0.35
RFFL-211ENST00000584541 LANCL2Q9NS86 450 aa17.23■□□□□ 0.35
RFFL-211ENST00000584541 CROTQ9UKG9 612 aa17.23■□□□□ 0.35
RFFL-211ENST00000584541 MKL2Q9ULH7 1088 aa17.23■□□□□ 0.35
RFFL-211ENST00000584541 ENTPD4Q9Y227 616 aa17.23■□□□□ 0.35
RFFL-211ENST00000584541 ZNF780BQ9Y6R6 833 aa17.23■□□□□ 0.35
RFFL-211ENST00000584541 FAM234BA2RU67 622 aa17.22■□□□□ 0.35
RFFL-211ENST00000584541 SYNDIG1LA6NDD5 238 aa17.22■□□□□ 0.35
RFFL-211ENST00000584541 GABRR3A8MPY1 467 aa17.22■□□□□ 0.35
RFFL-211ENST00000584541 SLC22A2O15244 555 aa17.22■□□□□ 0.35
RFFL-211ENST00000584541 ERAL1O75616 437 aaKnown RBP17.22■□□□□ 0.35
RFFL-211ENST00000584541 CYC1P08574 325 aa17.22■□□□□ 0.35
RFFL-211ENST00000584541 FOLR3P41439 243 aa17.22■□□□□ 0.35
RFFL-211ENST00000584541 HNRNPFP52597 415 aaKnown RBP17.22■□□□□ 0.35
RFFL-211ENST00000584541 PCBP4P57723 403 aaKnown RBP17.22■□□□□ 0.35
RFFL-211ENST00000584541 KCNK10P57789 538 aa17.22■□□□□ 0.35
RFFL-211ENST00000584541 BIKQ13323 160 aa17.22■□□□□ 0.35
RFFL-211ENST00000584541 DNASE1L3Q13609 305 aa17.22■□□□□ 0.35
RFFL-211ENST00000584541 PDE7AQ13946 482 aa17.22■□□□□ 0.35
RFFL-211ENST00000584541 PGS1Q32NB8 556 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms