RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 BORAQ6PGQ7 559 aa12.55□□□□□ -0.4
RNF43-208ENST00000584437 RBM23Q86U06 439 aaKnown RBP12.55□□□□□ -0.4
RNF43-208ENST00000584437 C7orf34Q96L11 122 aa12.55□□□□□ -0.4
RNF43-208ENST00000584437 AP1S3Q96PC3 154 aa12.55□□□□□ -0.4
RNF43-208ENST00000584437 RBP7Q96R05 134 aa12.55□□□□□ -0.4
RNF43-208ENST00000584437 SLC5A7Q9GZV3 580 aa12.55□□□□□ -0.4
RNF43-208ENST00000584437 ACOT13Q9NPJ3 140 aa12.55□□□□□ -0.4
RNF43-208ENST00000584437 WASF3Q9UPY6 502 aa12.55□□□□□ -0.4
RNF43-208ENST00000584437 ZNF705EA8MWA4 302 aaPredicted RBP12.54□□□□□ -0.4
RNF43-208ENST00000584437 M0R129 80 aa12.54□□□□□ -0.4
RNF43-208ENST00000584437 PAK4O96013 591 aaPredicted RBP12.54□□□□□ -0.4
RNF43-208ENST00000584437 MPC1LP0DKB6 136 aa12.54□□□□□ -0.4
RNF43-208ENST00000584437 TIA1P31483 386 aaKnown RBP eCLIP12.54□□□□□ -0.41e-7■■■■□ 21.9
RNF43-208ENST00000584437 PON2Q15165 354 aa12.54□□□□□ -0.4
RNF43-208ENST00000584437 GPRC6AQ5T6X5 926 aa12.54□□□□□ -0.4
RNF43-208ENST00000584437 SYNPOQ8N3V7 929 aa12.54□□□□□ -0.4
RNF43-208ENST00000584437 ACBD7Q8N6N7 88 aa12.54□□□□□ -0.4
RNF43-208ENST00000584437 ZNF709Q8N972 641 aa12.54□□□□□ -0.4
RNF43-208ENST00000584437 OVCA2Q8WZ82 227 aa12.54□□□□□ -0.4
RNF43-208ENST00000584437 RAB8BQ92930 207 aa12.54□□□□□ -0.4
RNF43-208ENST00000584437 RNF121Q9H920 327 aa12.54□□□□□ -0.4
RNF43-208ENST00000584437 UNKLQ9H9P5 680 aaKnown RBP12.54□□□□□ -0.4
RNF43-208ENST00000584437 B3GAT2Q9NPZ5 323 aa12.54□□□□□ -0.4
RNF43-208ENST00000584437 MYO5BQ9ULV0 1848 aa12.54□□□□□ -0.4
RNF43-208ENST00000584437 UNC119BA6NIH7 251 aa12.54□□□□□ -0.4
RNF43-208ENST00000584437 CAPN14A8MX76 684 aa12.54□□□□□ -0.4
RNF43-208ENST00000584437 TLE2Q04725 743 aa12.54□□□□□ -0.4
RNF43-208ENST00000584437 NFE2L1Q14494 772 aa12.54□□□□□ -0.4
RNF43-208ENST00000584437 SH3RF2Q8TEC5 729 aa12.54□□□□□ -0.4
RNF43-208ENST00000584437 ASB15Q8WXK1 588 aa12.54□□□□□ -0.4
RNF43-208ENST00000584437 IL12RB2Q99665 862 aa12.54□□□□□ -0.4
RNF43-208ENST00000584437 PBDC1Q9BVG4 233 aa12.54□□□□□ -0.4
RNF43-208ENST00000584437 GPR88Q9GZN0 384 aa12.54□□□□□ -0.4
RNF43-208ENST00000584437 CARS2Q9HA77 564 aaKnown RBP12.54□□□□□ -0.4
RNF43-208ENST00000584437 PNO1Q9NRX1 252 aaKnown RBP12.54□□□□□ -0.4
RNF43-208ENST00000584437 MMP20O60882 483 aa12.54□□□□□ -0.4
RNF43-208ENST00000584437 ADAP00813 363 aa12.54□□□□□ -0.4
RNF43-208ENST00000584437 CAPZA1P52907 286 aa12.54□□□□□ -0.4
RNF43-208ENST00000584437 AVL9Q8NBF6 648 aa12.54□□□□□ -0.4
RNF43-208ENST00000584437 PLA2G15Q8NCC3 412 aa12.54□□□□□ -0.4
RNF43-208ENST00000584437 HCAR2Q8TDS4 363 aa12.54□□□□□ -0.4
RNF43-208ENST00000584437 NLKQ9UBE8 527 aa12.54□□□□□ -0.4
RNF43-208ENST00000584437 PPM1BO75688 479 aa12.54□□□□□ -0.4
RNF43-208ENST00000584437 CAPN3P20807 821 aa12.54□□□□□ -0.4
RNF43-208ENST00000584437 EDNRBP24530 442 aa12.54□□□□□ -0.4
RNF43-208ENST00000584437 PRKXP51817 358 aa12.54□□□□□ -0.4
RNF43-208ENST00000584437 GAS6Q14393 721 aa12.54□□□□□ -0.4
RNF43-208ENST00000584437 ABRAXAS2Q15018 415 aa12.54□□□□□ -0.4
RNF43-208ENST00000584437 KREMEN2Q8NCW0 462 aa12.54□□□□□ -0.4
RNF43-208ENST00000584437 NLGN2Q8NFZ4 835 aa12.54□□□□□ -0.4
RNF43-208ENST00000584437 SCGB1C1Q8TD33 95 aa12.54□□□□□ -0.4
RNF43-208ENST00000584437 IMP4Q96G21 291 aaKnown RBP12.54□□□□□ -0.4
RNF43-208ENST00000584437 OR10A4Q9H209 315 aa12.54□□□□□ -0.4
RNF43-208ENST00000584437 MAFFQ9ULX9 164 aa12.54□□□□□ -0.4
RNF43-208ENST00000584437 PIGBOS1A0A0B4J2F0 54 aa12.54□□□□□ -0.4
RNF43-208ENST00000584437 PAHP00439 452 aa12.54□□□□□ -0.4
RNF43-208ENST00000584437 ALPPL2P10696 532 aa12.54□□□□□ -0.4
RNF43-208ENST00000584437 MECP2P51608 486 aaKnown RBP12.54□□□□□ -0.4
RNF43-208ENST00000584437 CLDN8P56748 225 aa12.54□□□□□ -0.4
RNF43-208ENST00000584437 SSX6Q7RTT6 188 aa12.54□□□□□ -0.4
RNF43-208ENST00000584437 THAP4Q8WY91 577 aa12.54□□□□□ -0.4
RNF43-208ENST00000584437 NSUN5Q96P11 429 aaKnown RBP12.54□□□□□ -0.4
RNF43-208ENST00000584437 SMOQ99835 787 aa12.54□□□□□ -0.4
RNF43-208ENST00000584437 GKN1Q9NS71 199 aa12.54□□□□□ -0.4
RNF43-208ENST00000584437 ACSL6Q9UKU0 697 aa12.54□□□□□ -0.4
RNF43-208ENST00000584437 BTBD19C9JJ37 291 aa12.53□□□□□ -0.4
RNF43-208ENST00000584437 NRP1O14786 923 aa12.53□□□□□ -0.4
RNF43-208ENST00000584437 IFNA1P01562 189 aa12.53□□□□□ -0.4
RNF43-208ENST00000584437 UCHL1P09936 223 aa12.53□□□□□ -0.4
RNF43-208ENST00000584437 RPL17P18621 184 aaKnown RBP12.53□□□□□ -0.4
RNF43-208ENST00000584437 OPRL1P41146 370 aa12.53□□□□□ -0.4
RNF43-208ENST00000584437 SOX2P48431 317 aa12.53□□□□□ -0.4
RNF43-208ENST00000584437 CDKN1CP49918 316 aaPredicted RBP12.53□□□□□ -0.4
RNF43-208ENST00000584437 VTCN1Q7Z7D3 282 aa12.53□□□□□ -0.4
RNF43-208ENST00000584437 ALDH16A1Q8IZ83 802 aa12.53□□□□□ -0.4
RNF43-208ENST00000584437 KRTCAP2Q8N6L1 136 aa12.53□□□□□ -0.4
RNF43-208ENST00000584437 PAPD5Q8NDF8 572 aaKnown RBP12.53□□□□□ -0.4
RNF43-208ENST00000584437 OR4C15Q8NGM1 316 aa12.53□□□□□ -0.4
RNF43-208ENST00000584437 OR6N2Q8NGY6 317 aa12.53□□□□□ -0.4
RNF43-208ENST00000584437 POLDIP3Q9BY77 421 aaKnown RBP12.53□□□□□ -0.4
RNF43-208ENST00000584437 SAV1Q9H4B6 383 aaPredicted RBP12.53□□□□□ -0.4
RNF43-208ENST00000584437 NANSQ9NR45 359 aa12.53□□□□□ -0.4
RNF43-208ENST00000584437 TMEM181Q9P2C4 612 aa12.53□□□□□ -0.4
RNF43-208ENST00000584437 KRBA1A5PL33 1030 aa12.53□□□□□ -0.4
RNF43-208ENST00000584437 SOCS5O75159 536 aa12.53□□□□□ -0.4
RNF43-208ENST00000584437 PLATP00750 562 aa12.53□□□□□ -0.4
RNF43-208ENST00000584437 PDYNP01213 254 aa12.53□□□□□ -0.4
RNF43-208ENST00000584437 GBAP04062 536 aa12.53□□□□□ -0.4
RNF43-208ENST00000584437 MLLT1Q03111 559 aaPredicted RBP12.53□□□□□ -0.4
RNF43-208ENST00000584437 PROX2Q3B8N5 592 aa12.53□□□□□ -0.4
RNF43-208ENST00000584437 PRSS58Q8IYP2 241 aa12.53□□□□□ -0.4
RNF43-208ENST00000584437 PRR11Q96HE9 360 aaPredicted RBP12.53□□□□□ -0.4
RNF43-208ENST00000584437 LRR1Q96L50 414 aa12.53□□□□□ -0.4
RNF43-208ENST00000584437 HS6ST2Q96MM7 605 aa12.53□□□□□ -0.4
RNF43-208ENST00000584437 NPLQ9BXD5 320 aaPredicted RBP12.53□□□□□ -0.4
RNF43-208ENST00000584437 ATG5Q9H1Y0 275 aa12.53□□□□□ -0.4
RNF43-208ENST00000584437 VRTNQ9H8Y1 702 aa12.53□□□□□ -0.4
RNF43-208ENST00000584437 NDUFAF4Q9P032 175 aa12.53□□□□□ -0.4
RNF43-208ENST00000584437 B3GNT3Q9Y2A9 372 aa12.53□□□□□ -0.4
RNF43-208ENST00000584437 TNFRSF10BO14763 440 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms