RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 TBCCQ15814 346 aa10.37□□□□□ -0.75
CCDC47-206ENST00000584112 DEFB113Q30KQ7 82 aa10.37□□□□□ -0.75
CCDC47-206ENST00000584112 KRTAP24-1Q3LI83 254 aa10.37□□□□□ -0.75
CCDC47-206ENST00000584112 KRTCAP3Q53RY4 240 aa10.37□□□□□ -0.75
CCDC47-206ENST00000584112 SLC25A25Q6KCM7 469 aa10.37□□□□□ -0.75
CCDC47-206ENST00000584112 ABHD17CQ6PCB6 329 aa10.37□□□□□ -0.75
CCDC47-206ENST00000584112 ZNF572Q7Z3I7 529 aaPredicted RBP10.37□□□□□ -0.75
CCDC47-206ENST00000584112 SCUBE1Q8IWY4 988 aa10.37□□□□□ -0.75
CCDC47-206ENST00000584112 DMRTC2Q8IXT2 367 aaPredicted RBP10.37□□□□□ -0.75
CCDC47-206ENST00000584112 ARMC10Q8N2F6 343 aa10.37□□□□□ -0.75
CCDC47-206ENST00000584112 SRFBP1Q8NEF9 429 aaKnown RBP10.37□□□□□ -0.75
CCDC47-206ENST00000584112 NFAM1Q8NET5 270 aaPredicted RBP10.37□□□□□ -0.75
CCDC47-206ENST00000584112 B3GNT7Q8NFL0 401 aa10.37□□□□□ -0.75
CCDC47-206ENST00000584112 FBF1Q8TES7 1133 aa10.37□□□□□ -0.75
CCDC47-206ENST00000584112 THAP3Q8WTV1 239 aaPredicted RBP10.37□□□□□ -0.75
CCDC47-206ENST00000584112 EXT2Q93063 718 aa10.37□□□□□ -0.75
CCDC47-206ENST00000584112 TMEM125Q96AQ2 219 aa10.37□□□□□ -0.75
CCDC47-206ENST00000584112 RMND5BQ96G75 393 aaPredicted RBP10.37□□□□□ -0.75
CCDC47-206ENST00000584112 VMP1Q96GC9 406 aa10.37□□□□□ -0.75
CCDC47-206ENST00000584112 QRFPRQ96P65 431 aa10.37□□□□□ -0.75
CCDC47-206ENST00000584112 KCNC2Q96PR1 638 aa10.37□□□□□ -0.75
CCDC47-206ENST00000584112 CCDC77Q9BR77 488 aa10.37□□□□□ -0.75
CCDC47-206ENST00000584112 CD244Q9BZW8 370 aa10.37□□□□□ -0.75
CCDC47-206ENST00000584112 ROGDIQ9GZN7 287 aa10.37□□□□□ -0.75
CCDC47-206ENST00000584112 ALG9Q9H6U8 611 aa10.37□□□□□ -0.75
CCDC47-206ENST00000584112 TRIM45Q9H8W5 580 aaPredicted RBP10.37□□□□□ -0.75
CCDC47-206ENST00000584112 PRM3Q9NNZ6 103 aa10.37□□□□□ -0.75
CCDC47-206ENST00000584112 ARHGAP21Q5T5U3 1957 aa10.37□□□□□ -0.75
CCDC47-206ENST00000584112 EXPH5Q8NEV8 1989 aa10.37□□□□□ -0.75
CCDC47-206ENST00000584112 CCDC189A1A4V9 331 aa10.36□□□□□ -0.75
CCDC47-206ENST00000584112 SYCE1LA8MT33 242 aa10.36□□□□□ -0.75
CCDC47-206ENST00000584112 SUPT3HB4E1H0 165 aa10.36□□□□□ -0.75
CCDC47-206ENST00000584112 NME2P1O60361 137 aa10.36□□□□□ -0.75
CCDC47-206ENST00000584112 KERAO60938 352 aa10.36□□□□□ -0.75
CCDC47-206ENST00000584112 SUPT3HO75486 399 aa10.36□□□□□ -0.75
CCDC47-206ENST00000584112 LTA4HP09960 611 aaKnown RBP10.36□□□□□ -0.75
CCDC47-206ENST00000584112 SLC35E2BP0CK96 405 aa10.36□□□□□ -0.75
CCDC47-206ENST00000584112 TFEBP19484 476 aa10.36□□□□□ -0.75
CCDC47-206ENST00000584112 NME2P22392 152 aa10.36□□□□□ -0.75
CCDC47-206ENST00000584112 CERS1P27544 350 aa10.36□□□□□ -0.75
CCDC47-206ENST00000584112 SERPINB1P30740 379 aa10.36□□□□□ -0.75
CCDC47-206ENST00000584112 TRHRP34981 398 aaPredicted RBP10.36□□□□□ -0.75
CCDC47-206ENST00000584112 CASP2P42575 452 aa10.36□□□□□ -0.75
CCDC47-206ENST00000584112 HLCSP50747 726 aa10.36□□□□□ -0.75
CCDC47-206ENST00000584112 CHIT1Q13231 466 aa10.36□□□□□ -0.75
CCDC47-206ENST00000584112 EFTUD2Q15029 972 aaKnown RBP eCLIP10.36□□□□□ -0.75
CCDC47-206ENST00000584112 MAPKAPK3Q16644 382 aa10.36□□□□□ -0.75
CCDC47-206ENST00000584112 FBXO48Q5FWF7 155 aa10.36□□□□□ -0.75
CCDC47-206ENST00000584112 C8orf74Q6P047 294 aa10.36□□□□□ -0.75
CCDC47-206ENST00000584112 PODNL1Q6PEZ8 512 aa10.36□□□□□ -0.75
CCDC47-206ENST00000584112 ZDHHC24Q6UX98 284 aa10.36□□□□□ -0.75
CCDC47-206ENST00000584112 CEP128Q6ZU80 1094 aa10.36□□□□□ -0.75
CCDC47-206ENST00000584112 GALNTL5Q7Z4T8 443 aa10.36□□□□□ -0.75
CCDC47-206ENST00000584112 VN1R5Q7Z5H4 357 aa10.36□□□□□ -0.75
CCDC47-206ENST00000584112 CMC1Q7Z7K0 106 aa10.36□□□□□ -0.75
CCDC47-206ENST00000584112 FAM47BQ8NA70 645 aa10.36□□□□□ -0.75
CCDC47-206ENST00000584112 C7orf57Q8NEG2 295 aa10.36□□□□□ -0.75
CCDC47-206ENST00000584112 UBTD2Q8WUN7 234 aa10.36□□□□□ -0.75
CCDC47-206ENST00000584112 ESAMQ96AP7 390 aa10.36□□□□□ -0.75
CCDC47-206ENST00000584112 MAGED4Q96JG8 741 aa10.36□□□□□ -0.75
CCDC47-206ENST00000584112 GPR137Q96N19 417 aa10.36□□□□□ -0.75
CCDC47-206ENST00000584112 FRMD6Q96NE9 622 aa10.36□□□□□ -0.75
CCDC47-206ENST00000584112 HES7Q9BYE0 225 aa10.36□□□□□ -0.75
CCDC47-206ENST00000584112 ADAP2Q9NPF8 381 aa10.36□□□□□ -0.75
CCDC47-206ENST00000584112 PNO1Q9NRX1 252 aaKnown RBP10.36□□□□□ -0.75
CCDC47-206ENST00000584112 OPTCQ9UBM4 332 aa10.36□□□□□ -0.75
CCDC47-206ENST00000584112 ZNF490Q9ULM2 529 aaPredicted RBP10.36□□□□□ -0.75
CCDC47-206ENST00000584112 DAPP1Q9UN19 280 aa10.36□□□□□ -0.75
CCDC47-206ENST00000584112 PPIEQ9UNP9 301 aaKnown RBP10.36□□□□□ -0.75
CCDC47-206ENST00000584112 ZNF281Q9Y2X9 895 aa10.36□□□□□ -0.75
CCDC47-206ENST00000584112 ACOT9Q9Y305 439 aa10.36□□□□□ -0.75
CCDC47-206ENST00000584112 SPACA6W5XKT8 324 aa10.36□□□□□ -0.75
CCDC47-206ENST00000584112 A0A087X1B8 175 aa10.35□□□□□ -0.75
CCDC47-206ENST00000584112 A0A0G2JK05 382 aa10.35□□□□□ -0.75
CCDC47-206ENST00000584112 TRBV11-1A0A0K0K1C0 115 aa10.35□□□□□ -0.75
CCDC47-206ENST00000584112 K7EPI3 171 aa10.35□□□□□ -0.75
CCDC47-206ENST00000584112 SLC19A2O60779 497 aa10.35□□□□□ -0.75
CCDC47-206ENST00000584112 PRAMEF4O60810 478 aa10.35□□□□□ -0.75
CCDC47-206ENST00000584112 CTAG2O75638 210 aa10.35□□□□□ -0.75
CCDC47-206ENST00000584112 TBX6O95947 436 aaPredicted RBP10.35□□□□□ -0.75
CCDC47-206ENST00000584112 ZNF24P17028 368 aa10.35□□□□□ -0.75
CCDC47-206ENST00000584112 CD22P20273 847 aa10.35□□□□□ -0.75
CCDC47-206ENST00000584112 PHBP35232 272 aa10.35□□□□□ -0.75
CCDC47-206ENST00000584112 MSH2P43246 934 aa10.35□□□□□ -0.75
CCDC47-206ENST00000584112 LIM2P55344 173 aa10.35□□□□□ -0.75
CCDC47-206ENST00000584112 E2F2Q14209 437 aa10.35□□□□□ -0.75
CCDC47-206ENST00000584112 ELAVL1Q15717 326 aaKnown RBP10.35□□□□□ -0.75
CCDC47-206ENST00000584112 FAM83EQ2M2I3 478 aa10.35□□□□□ -0.75
CCDC47-206ENST00000584112 TMEM35AQ53FP2 167 aa10.35□□□□□ -0.75
CCDC47-206ENST00000584112 PDLIM3Q53GG5 364 aaPredicted RBP10.35□□□□□ -0.75
CCDC47-206ENST00000584112 PRAMEF9Q5VWM5 478 aa10.35□□□□□ -0.75
CCDC47-206ENST00000584112 MED27Q6P2C8 311 aa10.35□□□□□ -0.75
CCDC47-206ENST00000584112 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.35□□□□□ -0.75
CCDC47-206ENST00000584112 ISCA2Q86U28 154 aa10.35□□□□□ -0.75
CCDC47-206ENST00000584112 C17orf53Q8N3J3 647 aaPredicted RBP10.35□□□□□ -0.75
CCDC47-206ENST00000584112 TMEM132CQ8N3T6 1108 aa10.35□□□□□ -0.75
CCDC47-206ENST00000584112 TMEM156Q8N614 296 aa10.35□□□□□ -0.75
CCDC47-206ENST00000584112 POGLUT1Q8NBL1 392 aa10.35□□□□□ -0.75
CCDC47-206ENST00000584112 APCDD1LQ8NCL9 501 aa10.35□□□□□ -0.75
CCDC47-206ENST00000584112 SIMC1Q8NDZ2 872 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms