RNA–Protein interactions for RNA: ENST00000583438.1

PPP4R1-225, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 4

Gene PPP4R1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-225	ENST00000583438	MLF1	P58340	268 aa		7.33	□□□□□ -1.24
PPP4R1-225	ENST00000583438	DBP	Q10586	325 aa	Predicted RBP	7.33	□□□□□ -1.24
PPP4R1-225	ENST00000583438	CTBP1	Q13363	440 aa		7.33	□□□□□ -1.24
PPP4R1-225	ENST00000583438	PHKG1	Q16816	387 aa		7.33	□□□□□ -1.24
PPP4R1-225	ENST00000583438	ANKRD20A4	Q4UJ75	823 aa		7.33	□□□□□ -1.24
PPP4R1-225	ENST00000583438	CATSPERE	Q5SY80	951 aa		7.33	□□□□□ -1.24
PPP4R1-225	ENST00000583438	MFSD4B	Q5TF39	518 aa		7.33	□□□□□ -1.24
PPP4R1-225	ENST00000583438	RTL6	Q6ICC9	239 aa		7.33	□□□□□ -1.24
PPP4R1-225	ENST00000583438	STK32C	Q86UX6	486 aa		7.33	□□□□□ -1.24
PPP4R1-225	ENST00000583438	ALS2CR12	Q96Q35	445 aa		7.33	□□□□□ -1.24
PPP4R1-225	ENST00000583438	PANX3	Q96QZ0	392 aa		7.33	□□□□□ -1.24
PPP4R1-225	ENST00000583438	PANX2	Q96RD6	677 aa		7.33	□□□□□ -1.24
PPP4R1-225	ENST00000583438	TTC1	Q99614	292 aa		7.33	□□□□□ -1.24
PPP4R1-225	ENST00000583438	VKORC1	Q9BQB6	163 aa		7.33	□□□□□ -1.24
PPP4R1-225	ENST00000583438	UTP23	Q9BRU9	249 aa	Known RBP	7.33	□□□□□ -1.24
PPP4R1-225	ENST00000583438	BRINP2	Q9C0B6	783 aa		7.33	□□□□□ -1.24
PPP4R1-225	ENST00000583438	TRIM45	Q9H8W5	580 aa	Predicted RBP	7.33	□□□□□ -1.24
PPP4R1-225	ENST00000583438	LIN28A	Q9H9Z2	209 aa	Known RBP	7.33	□□□□□ -1.24
PPP4R1-225	ENST00000583438	NECTIN3	Q9NQS3	549 aa		7.33	□□□□□ -1.24
PPP4R1-225	ENST00000583438	EIF2B3	Q9NR50	452 aa	Known RBP	7.33	□□□□□ -1.24
PPP4R1-225	ENST00000583438	AMFR	Q9UKV5	643 aa		7.33	□□□□□ -1.24
PPP4R1-225	ENST00000583438	CDC14A	Q9UNH5	594 aa		7.33	□□□□□ -1.24
PPP4R1-225	ENST00000583438	DRG1	Q9Y295	367 aa	Known RBP	7.33	□□□□□ -1.24
PPP4R1-225	ENST00000583438	FAM215A	Q9Y5M1	114 aa		7.33	□□□□□ -1.24
PPP4R1-225	ENST00000583438	CUBN	O60494	3623 aa		7.33	□□□□□ -1.24
PPP4R1-225	ENST00000583438	KCNE1B	A0A087WTH5	132 aa		7.32	□□□□□ -1.24
PPP4R1-225	ENST00000583438	TTI1	O43156	1089 aa		7.32	□□□□□ -1.24
PPP4R1-225	ENST00000583438	VPS26A	O75436	327 aa		7.32	□□□□□ -1.24
PPP4R1-225	ENST00000583438	TSPAN12	O95859	305 aa		7.32	□□□□□ -1.24
PPP4R1-225	ENST00000583438	TBX6	O95947	436 aa	Predicted RBP	7.32	□□□□□ -1.24
PPP4R1-225	ENST00000583438	TPM1	P09493	284 aa		7.32	□□□□□ -1.24
PPP4R1-225	ENST00000583438	PKM	P14618	531 aa	Known RBP	7.32	□□□□□ -1.24
PPP4R1-225	ENST00000583438	ZNF24	P17028	368 aa		7.32	□□□□□ -1.24
PPP4R1-225	ENST00000583438	EEF1D	P29692	281 aa	Known RBP	7.32	□□□□□ -1.24
PPP4R1-225	ENST00000583438	CYLC1	P35663	651 aa	Predicted RBP	7.32	□□□□□ -1.24
PPP4R1-225	ENST00000583438	ZNF75D	P51815	510 aa		7.32	□□□□□ -1.24
PPP4R1-225	ENST00000583438	ART1	P52961	327 aa		7.32	□□□□□ -1.24
PPP4R1-225	ENST00000583438	ADAR	P55265	1226 aa	Known RBP	7.32	□□□□□ -1.24
PPP4R1-225	ENST00000583438	NUP107	P57740	925 aa		7.32	□□□□□ -1.24
PPP4R1-225	ENST00000583438	RELA	Q04206	551 aa		7.32	□□□□□ -1.24
PPP4R1-225	ENST00000583438	ARHGAP19	Q14CB8	494 aa		7.32	□□□□□ -1.24
PPP4R1-225	ENST00000583438	RPS6KA1	Q15418	735 aa		7.32	□□□□□ -1.24
PPP4R1-225	ENST00000583438	SPA17	Q15506	151 aa		7.32	□□□□□ -1.24
PPP4R1-225	ENST00000583438	TRIP13	Q15645	432 aa	Predicted RBP	7.32	□□□□□ -1.24
PPP4R1-225	ENST00000583438	MAPKAPK3	Q16644	382 aa		7.32	□□□□□ -1.24
PPP4R1-225	ENST00000583438	MEP1A	Q16819	746 aa		7.32	□□□□□ -1.24
PPP4R1-225	ENST00000583438	LONRF1	Q17RB8	773 aa		7.32	□□□□□ -1.24
PPP4R1-225	ENST00000583438	AARS2	Q5JTZ9	985 aa	Known RBP	7.32	□□□□□ -1.24
PPP4R1-225	ENST00000583438	RBM20	Q5T481	1227 aa	Known RBP	7.32	□□□□□ -1.24
PPP4R1-225	ENST00000583438	KIAA0930	Q6ICG6	404 aa	Predicted RBP	7.32	□□□□□ -1.24
PPP4R1-225	ENST00000583438	SLC25A25	Q6KCM7	469 aa		7.32	□□□□□ -1.24
PPP4R1-225	ENST00000583438	TTC27	Q6P3X3	843 aa		7.32	□□□□□ -1.24
PPP4R1-225	ENST00000583438	MTFR2	Q6P444	385 aa		7.32	□□□□□ -1.24
PPP4R1-225	ENST00000583438	ADCK2	Q7Z695	626 aa		7.32	□□□□□ -1.24
PPP4R1-225	ENST00000583438	PCGF5	Q86SE9	256 aa		7.32	□□□□□ -1.24
PPP4R1-225	ENST00000583438	LRRC6	Q86X45	466 aa		7.32	□□□□□ -1.24
PPP4R1-225	ENST00000583438	KRTAP1-3	Q8IUG1	177 aa		7.32	□□□□□ -1.24
PPP4R1-225	ENST00000583438	APCDD1L	Q8NCL9	501 aa		7.32	□□□□□ -1.24
PPP4R1-225	ENST00000583438	PLPP5	Q8NEB5	264 aa		7.32	□□□□□ -1.24
PPP4R1-225	ENST00000583438	FAM57A	Q8TBR7	257 aa		7.32	□□□□□ -1.24
PPP4R1-225	ENST00000583438	M1AP	Q8TC57	530 aa		7.32	□□□□□ -1.24
PPP4R1-225	ENST00000583438	ASB15	Q8WXK1	588 aa		7.32	□□□□□ -1.24
PPP4R1-225	ENST00000583438	SIGLEC10	Q96LC7	697 aa		7.32	□□□□□ -1.24
PPP4R1-225	ENST00000583438	ZNF354B	Q96LW1	612 aa		7.32	□□□□□ -1.24
PPP4R1-225	ENST00000583438	GPR21	Q99679	349 aa		7.32	□□□□□ -1.24
PPP4R1-225	ENST00000583438	SMR3A	Q99954	134 aa		7.32	□□□□□ -1.24
PPP4R1-225	ENST00000583438	ATG10	Q9H0Y0	220 aa		7.32	□□□□□ -1.24
PPP4R1-225	ENST00000583438	CXXC4	Q9H2H0	198 aa		7.32	□□□□□ -1.24
PPP4R1-225	ENST00000583438	TSPY26P	Q9H489	355 aa		7.32	□□□□□ -1.24
PPP4R1-225	ENST00000583438	KLHL31	Q9H511	634 aa		7.32	□□□□□ -1.24
PPP4R1-225	ENST00000583438	EMC7	Q9NPA0	242 aa		7.32	□□□□□ -1.24
PPP4R1-225	ENST00000583438	LRFN1	Q9P244	771 aa		7.32	□□□□□ -1.24
PPP4R1-225	ENST00000583438	PDE10A	Q9Y233	779 aa		7.32	□□□□□ -1.24
PPP4R1-225	ENST00000583438	RAI1	Q7Z5J4	1906 aa	Predicted RBP	7.32	□□□□□ -1.24
PPP4R1-225	ENST00000583438	TLN2	Q9Y4G6	2542 aa		7.32	□□□□□ -1.24
PPP4R1-225	ENST00000583438	MED12L	Q86YW9	2145 aa		7.31	□□□□□ -1.24
PPP4R1-225	ENST00000583438	ANK3	Q12955	4377 aa	Known RBP	7.31	□□□□□ -1.24
PPP4R1-225	ENST00000583438		A8MUA0	341 aa		7.31	□□□□□ -1.24
PPP4R1-225	ENST00000583438	MAGEB17	A8MXT2	336 aa		7.31	□□□□□ -1.24
PPP4R1-225	ENST00000583438	MIF4GD	A9UHW6	222 aa	Known RBP	7.31	□□□□□ -1.24
PPP4R1-225	ENST00000583438		G3V3Y1	287 aa		7.31	□□□□□ -1.24
PPP4R1-225	ENST00000583438	SLC16A5	O15375	505 aa		7.31	□□□□□ -1.24
PPP4R1-225	ENST00000583438	PRPF4	O43172	522 aa	Known RBP eCLIP	7.31	□□□□□ -1.24
PPP4R1-225	ENST00000583438	CHST10	O43529	356 aa		7.31	□□□□□ -1.24
PPP4R1-225	ENST00000583438	KIF5C	O60282	957 aa		7.31	□□□□□ -1.24
PPP4R1-225	ENST00000583438	GALR3	O60755	368 aa	Predicted RBP	7.31	□□□□□ -1.24
PPP4R1-225	ENST00000583438	PHF2	O75151	1096 aa		7.31	□□□□□ -1.24
PPP4R1-225	ENST00000583438	BANF1	O75531	89 aa		7.31	□□□□□ -1.24
PPP4R1-225	ENST00000583438	PDE9A	O76083	593 aa		7.31	□□□□□ -1.24
PPP4R1-225	ENST00000583438	SYF2	O95926	243 aa	Known RBP	7.31	□□□□□ -1.24
PPP4R1-225	ENST00000583438	PLA2G1B	P04054	148 aa	Known RBP	7.31	□□□□□ -1.24
PPP4R1-225	ENST00000583438	TPO	P07202	933 aa		7.31	□□□□□ -1.24
PPP4R1-225	ENST00000583438	UQCRH	P07919	91 aa		7.31	□□□□□ -1.24
PPP4R1-225	ENST00000583438	ABO	P16442	354 aa		7.31	□□□□□ -1.24
PPP4R1-225	ENST00000583438	NPPB	P16860	134 aa		7.31	□□□□□ -1.24
PPP4R1-225	ENST00000583438	TFEB	P19484	476 aa		7.31	□□□□□ -1.24
PPP4R1-225	ENST00000583438	CHRM3	P20309	590 aa		7.31	□□□□□ -1.24
PPP4R1-225	ENST00000583438	OGN	P20774	298 aa	Known RBP	7.31	□□□□□ -1.24
PPP4R1-225	ENST00000583438	GPR143	P51810	404 aa		7.31	□□□□□ -1.24
PPP4R1-225	ENST00000583438	SMS	P52788	366 aa		7.31	□□□□□ -1.24

Retrieved 100 of 20,778 RNA–protein pairs in 65 ms