RNA–Protein interactions for RNA: ENST00000581523.5

MSI2-213, Transcript of musashi RNA binding protein 2, human

TSL 2

Gene MSI2, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-213	ENST00000581523	DPYSL3	Q14195	570 aa		4.17	□□□□□ -1.74
MSI2-213	ENST00000581523	SYTL3	Q4VX76	610 aa		4.17	□□□□□ -1.74
MSI2-213	ENST00000581523	PYCR3	Q53H96	274 aa		4.17	□□□□□ -1.74
MSI2-213	ENST00000581523	ZNF362	Q5T0B9	420 aa	Predicted RBP	4.17	□□□□□ -1.74
MSI2-213	ENST00000581523	PRAMEF17	Q5VTA0	474 aa		4.17	□□□□□ -1.74
MSI2-213	ENST00000581523	SUMO4	Q6EEV6	95 aa		4.17	□□□□□ -1.74
MSI2-213	ENST00000581523	PPP1R2P3	Q6NXS1	205 aa		4.17	□□□□□ -1.74
MSI2-213	ENST00000581523	LRIG3	Q6UXM1	1119 aa		4.17	□□□□□ -1.74
MSI2-213	ENST00000581523	IGFN1	Q86VF2	1251 aa		4.17	□□□□□ -1.74
MSI2-213	ENST00000581523	TICAM1	Q8IUC6	712 aa		4.17	□□□□□ -1.74
MSI2-213	ENST00000581523	C17orf53	Q8N3J3	647 aa	Predicted RBP	4.17	□□□□□ -1.74
MSI2-213	ENST00000581523	CCNY	Q8ND76	341 aa		4.17	□□□□□ -1.74
MSI2-213	ENST00000581523	OR4D9	Q8NGE8	314 aa		4.17	□□□□□ -1.74
MSI2-213	ENST00000581523	ZNF564	Q8TBZ8	553 aa	Predicted RBP	4.17	□□□□□ -1.74
MSI2-213	ENST00000581523	HCAR2	Q8TDS4	363 aa		4.17	□□□□□ -1.74
MSI2-213	ENST00000581523	NAT14	Q8WUY8	206 aa		4.17	□□□□□ -1.74
MSI2-213	ENST00000581523	PIH1D2	Q8WWB5	315 aa		4.17	□□□□□ -1.74
MSI2-213	ENST00000581523	STARD8	Q92502	1023 aa		4.17	□□□□□ -1.74
MSI2-213	ENST00000581523	TMEM159	Q96B96	161 aa		4.17	□□□□□ -1.74
MSI2-213	ENST00000581523	MMAB	Q96EY8	250 aa	Predicted RBP	4.17	□□□□□ -1.74
MSI2-213	ENST00000581523	PGAM5	Q96HS1	289 aa		4.17	□□□□□ -1.74
MSI2-213	ENST00000581523	ZNF599	Q96NL3	588 aa		4.17	□□□□□ -1.74
MSI2-213	ENST00000581523	TGM7	Q96PF1	710 aa		4.17	□□□□□ -1.74
MSI2-213	ENST00000581523	PIMREG	Q9BSJ6	248 aa		4.17	□□□□□ -1.74
MSI2-213	ENST00000581523	EFHD1	Q9BUP0	239 aa		4.17	□□□□□ -1.74
MSI2-213	ENST00000581523	SPATA16	Q9BXB7	569 aa		4.17	□□□□□ -1.74
MSI2-213	ENST00000581523	MAK16	Q9BXY0	300 aa	Known RBP	4.17	□□□□□ -1.74
MSI2-213	ENST00000581523	TXLNGY	Q9BZA5	131 aa		4.17	□□□□□ -1.74
MSI2-213	ENST00000581523	NAT10	Q9H0A0	1025 aa	Known RBP	4.17	□□□□□ -1.74
MSI2-213	ENST00000581523	OR2AG1	Q9H205	316 aa		4.17	□□□□□ -1.74
MSI2-213	ENST00000581523	GPN2	Q9H9Y4	310 aa	Predicted RBP	4.17	□□□□□ -1.74
MSI2-213	ENST00000581523	PCDH9	Q9HC56	1237 aa		4.17	□□□□□ -1.74
MSI2-213	ENST00000581523	MOV10	Q9HCE1	1003 aa	Known RBP	4.17	□□□□□ -1.74
MSI2-213	ENST00000581523	MRPL47	Q9HD33	250 aa	Known RBP	4.17	□□□□□ -1.74
MSI2-213	ENST00000581523	STARD5	Q9NSY2	213 aa		4.17	□□□□□ -1.74
MSI2-213	ENST00000581523	RBM22	Q9NW64	420 aa	Known RBP eCLIP	4.17	□□□□□ -1.74	1e-7	■■■■■ 31.6
MSI2-213	ENST00000581523	TRNAU1AP	Q9NX07	287 aa	Known RBP	4.17	□□□□□ -1.74
MSI2-213	ENST00000581523	ABI3	Q9P2A4	366 aa		4.17	□□□□□ -1.74
MSI2-213	ENST00000581523	IL17B	Q9UHF5	180 aa		4.17	□□□□□ -1.74
MSI2-213	ENST00000581523	NENF	Q9UMX5	172 aa		4.17	□□□□□ -1.74
MSI2-213	ENST00000581523	HEY1	Q9Y5J3	304 aa		4.17	□□□□□ -1.74
MSI2-213	ENST00000581523	ASH1L	Q9NR48	2969 aa	Known RBP	4.17	□□□□□ -1.74
MSI2-213	ENST00000581523	TRBV5-7	A0A0A0MS05	114 aa		4.16	□□□□□ -1.74
MSI2-213	ENST00000581523	LOC101059948	A0A1B0GTJ6	334 aa		4.16	□□□□□ -1.74
MSI2-213	ENST00000581523		A0A1W2PQ67	120 aa		4.16	□□□□□ -1.74
MSI2-213	ENST00000581523	LRRD1	A4D1F6	860 aa		4.16	□□□□□ -1.74
MSI2-213	ENST00000581523	OR52A4P	A6NMU1	304 aa		4.16	□□□□□ -1.74
MSI2-213	ENST00000581523	IFNL4	K9M1U5	179 aa		4.16	□□□□□ -1.74
MSI2-213	ENST00000581523	PSMD11	O00231	422 aa		4.16	□□□□□ -1.74
MSI2-213	ENST00000581523	STK17B	O94768	372 aa		4.16	□□□□□ -1.74
MSI2-213	ENST00000581523	IPO7	O95373	1038 aa	Known RBP	4.16	□□□□□ -1.74
MSI2-213	ENST00000581523	TF	P02787	698 aa		4.16	□□□□□ -1.74
MSI2-213	ENST00000581523	GYPC	P04921	128 aa		4.16	□□□□□ -1.74
MSI2-213	ENST00000581523	HOXC4	P09017	264 aa	Predicted RBP	4.16	□□□□□ -1.74
MSI2-213	ENST00000581523	PRR35	P0CG20	571 aa		4.16	□□□□□ -1.74
MSI2-213	ENST00000581523	GZMA	P12544	262 aa		4.16	□□□□□ -1.74
MSI2-213	ENST00000581523	F3	P13726	295 aa		4.16	□□□□□ -1.74
MSI2-213	ENST00000581523	ITGB6	P18564	788 aa		4.16	□□□□□ -1.74
MSI2-213	ENST00000581523	IL4R	P24394	825 aa		4.16	□□□□□ -1.74
MSI2-213	ENST00000581523	MCM3	P25205	808 aa		4.16	□□□□□ -1.74
MSI2-213	ENST00000581523	CD82	P27701	267 aa		4.16	□□□□□ -1.74
MSI2-213	ENST00000581523	CALR	P27797	417 aa	Known RBP	4.16	□□□□□ -1.74
MSI2-213	ENST00000581523	GCH1	P30793	250 aa		4.16	□□□□□ -1.74
MSI2-213	ENST00000581523	RYK	P34925	604 aa		4.16	□□□□□ -1.74
MSI2-213	ENST00000581523	PCK1	P35558	622 aa		4.16	□□□□□ -1.74
MSI2-213	ENST00000581523	CCR10	P46092	362 aa		4.16	□□□□□ -1.74
MSI2-213	ENST00000581523	FASLG	P48023	281 aa		4.16	□□□□□ -1.74
MSI2-213	ENST00000581523	LEPR	P48357	1165 aa	Known RBP	4.16	□□□□□ -1.74
MSI2-213	ENST00000581523	HCAR3	P49019	387 aa		4.16	□□□□□ -1.74
MSI2-213	ENST00000581523	CSRP3	P50461	194 aa		4.16	□□□□□ -1.74
MSI2-213	ENST00000581523	AP1B1	Q10567	949 aa		4.16	□□□□□ -1.74
MSI2-213	ENST00000581523	PIGH	Q14442	188 aa	Predicted RBP	4.16	□□□□□ -1.74
MSI2-213	ENST00000581523	FGFBP1	Q14512	234 aa		4.16	□□□□□ -1.74
MSI2-213	ENST00000581523	MESD	Q14696	234 aa		4.16	□□□□□ -1.74
MSI2-213	ENST00000581523	NR1D2	Q14995	579 aa		4.16	□□□□□ -1.74
MSI2-213	ENST00000581523	IGFBP7	Q16270	282 aa		4.16	□□□□□ -1.74
MSI2-213	ENST00000581523	DEFB109B	Q30KR1	87 aa		4.16	□□□□□ -1.74
MSI2-213	ENST00000581523	ANKRD20A8P	Q5CZ79	823 aa		4.16	□□□□□ -1.74
MSI2-213	ENST00000581523	CCDC122	Q5T0U0	273 aa		4.16	□□□□□ -1.74
MSI2-213	ENST00000581523	DCAF12	Q5T6F0	453 aa		4.16	□□□□□ -1.74
MSI2-213	ENST00000581523	HENMT1	Q5T8I9	393 aa	Known RBP	4.16	□□□□□ -1.74
MSI2-213	ENST00000581523	IRGC	Q6NXR0	463 aa		4.16	□□□□□ -1.74
MSI2-213	ENST00000581523	SLC30A6	Q6NXT4	461 aa		4.16	□□□□□ -1.74
MSI2-213	ENST00000581523	DUS1L	Q6P1R4	473 aa	Known RBP	4.16	□□□□□ -1.74
MSI2-213	ENST00000581523	AAGAB	Q6PD74	315 aa		4.16	□□□□□ -1.74
MSI2-213	ENST00000581523	CRIP3	Q6Q6R5	217 aa		4.16	□□□□□ -1.74
MSI2-213	ENST00000581523	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	4.16	□□□□□ -1.74
MSI2-213	ENST00000581523	FAM92B	Q6ZTR7	304 aa		4.16	□□□□□ -1.74
MSI2-213	ENST00000581523	TECPR1	Q7Z6L1	1165 aa		4.16	□□□□□ -1.74
MSI2-213	ENST00000581523	TMEM135	Q86UB9	458 aa		4.16	□□□□□ -1.74
MSI2-213	ENST00000581523	TRAPPC5	Q8IUR0	188 aa		4.16	□□□□□ -1.74
MSI2-213	ENST00000581523	PSTK	Q8IV42	348 aa	Known RBP	4.16	□□□□□ -1.74
MSI2-213	ENST00000581523	CCDC13	Q8IYE1	715 aa		4.16	□□□□□ -1.74
MSI2-213	ENST00000581523	CADM3	Q8N126	398 aa		4.16	□□□□□ -1.74
MSI2-213	ENST00000581523	NDUFAF2	Q8N183	169 aa		4.16	□□□□□ -1.74
MSI2-213	ENST00000581523	SFRP1	Q8N474	314 aa		4.16	□□□□□ -1.74
MSI2-213	ENST00000581523	PQLC3	Q8N755	202 aa		4.16	□□□□□ -1.74
MSI2-213	ENST00000581523	NIPA2	Q8N8Q9	360 aa		4.16	□□□□□ -1.74
MSI2-213	ENST00000581523	BMPER	Q8N8U9	685 aa		4.16	□□□□□ -1.74
MSI2-213	ENST00000581523	KCTD6	Q8NC69	237 aa		4.16	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms