RNA–Protein interactions for RNA: ENST00000581226.1

SMCHD1-204, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-204ENST00000581226 A0A1B0GTH9 108 aa3.58□□□□□ -1.84
SMCHD1-204ENST00000581226 ATP6AP2A0A1C7CYW4 349 aa3.58□□□□□ -1.84
SMCHD1-204ENST00000581226 ZNF263O14978 683 aa3.58□□□□□ -1.84
SMCHD1-204ENST00000581226 PHF1O43189 567 aaPredicted RBP3.58□□□□□ -1.84
SMCHD1-204ENST00000581226 BCL2L11O43521 198 aa3.58□□□□□ -1.84
SMCHD1-204ENST00000581226 GPRIN2O60269 458 aa3.58□□□□□ -1.84
SMCHD1-204ENST00000581226 IGHG1P01857 330 aa3.58□□□□□ -1.84
SMCHD1-204ENST00000581226 MT-ND1P03886 318 aa3.58□□□□□ -1.84
SMCHD1-204ENST00000581226 ANPEPP15144 967 aa3.58□□□□□ -1.84
SMCHD1-204ENST00000581226 BCL3P20749 454 aa3.58□□□□□ -1.84
SMCHD1-204ENST00000581226 PPP2R1AP30153 589 aa3.58□□□□□ -1.84
SMCHD1-204ENST00000581226 ID1P41134 155 aa3.58□□□□□ -1.84
SMCHD1-204ENST00000581226 CCR4P51679 360 aa3.58□□□□□ -1.84
SMCHD1-204ENST00000581226 STX1BP61266 288 aa3.58□□□□□ -1.84
SMCHD1-204ENST00000581226 SLMAPQ14BN4 828 aa3.58□□□□□ -1.84
SMCHD1-204ENST00000581226 CAPN13Q6MZZ7 669 aaPredicted RBP3.58□□□□□ -1.84
SMCHD1-204ENST00000581226 KCTD9Q7L273 389 aa3.58□□□□□ -1.84
SMCHD1-204ENST00000581226 HPS6Q86YV9 775 aa3.58□□□□□ -1.84
SMCHD1-204ENST00000581226 TMEM126BQ8IUX1 230 aa3.58□□□□□ -1.84
SMCHD1-204ENST00000581226 LAX1Q8IWV1 398 aa3.58□□□□□ -1.84
SMCHD1-204ENST00000581226 NUP93Q8N1F7 819 aa3.58□□□□□ -1.84
SMCHD1-204ENST00000581226 RTL3Q8N8U3 475 aaKnown RBP3.58□□□□□ -1.84
SMCHD1-204ENST00000581226 CLEC1AQ8NC01 280 aa3.58□□□□□ -1.84
SMCHD1-204ENST00000581226 TRPV3Q8NET8 790 aa3.58□□□□□ -1.84
SMCHD1-204ENST00000581226 DESI2Q9BSY9 194 aa3.58□□□□□ -1.84
SMCHD1-204ENST00000581226 CACNG6Q9BXT2 260 aa3.58□□□□□ -1.84
SMCHD1-204ENST00000581226 MARCH7Q9H992 704 aa3.58□□□□□ -1.84
SMCHD1-204ENST00000581226 RNPEPL1Q9HAU8 725 aa3.58□□□□□ -1.84
SMCHD1-204ENST00000581226 SLC7A10Q9NS82 523 aa3.58□□□□□ -1.84
SMCHD1-204ENST00000581226 GPR83Q9NYM4 423 aa3.58□□□□□ -1.84
SMCHD1-204ENST00000581226 ERVK-19Q9WJR5 959 aa3.58□□□□□ -1.84
SMCHD1-204ENST00000581226 A0A0A6YYC8 382 aaPredicted RBP3.57□□□□□ -1.84
SMCHD1-204ENST00000581226 BCLAF3A2AJT9 711 aaKnown RBP3.57□□□□□ -1.84
SMCHD1-204ENST00000581226 I3L1I5 382 aaPredicted RBP3.57□□□□□ -1.84
SMCHD1-204ENST00000581226 SH3BGRLO75368 114 aa3.57□□□□□ -1.84
SMCHD1-204ENST00000581226 CSO75390 466 aaKnown RBP3.57□□□□□ -1.84
SMCHD1-204ENST00000581226 PRDM1O75626 825 aa3.57□□□□□ -1.84
SMCHD1-204ENST00000581226 OR6A2O95222 327 aa3.57□□□□□ -1.84
SMCHD1-204ENST00000581226 GAS8O95995 478 aa3.57□□□□□ -1.84
SMCHD1-204ENST00000581226 GP9P14770 177 aa3.57□□□□□ -1.84
SMCHD1-204ENST00000581226 MUTP22033 750 aa3.57□□□□□ -1.84
SMCHD1-204ENST00000581226 ATP5DP30049 168 aa3.57□□□□□ -1.84
SMCHD1-204ENST00000581226 OR1D2P34982 312 aa3.57□□□□□ -1.84
SMCHD1-204ENST00000581226 SPRP35270 261 aaPredicted RBP3.57□□□□□ -1.84
SMCHD1-204ENST00000581226 GABPAQ06546 454 aa3.57□□□□□ -1.84
SMCHD1-204ENST00000581226 PEX6Q13608 980 aa3.57□□□□□ -1.84
SMCHD1-204ENST00000581226 RCN2Q14257 317 aa3.57□□□□□ -1.84
SMCHD1-204ENST00000581226 EIPR1Q53HC9 387 aa3.57□□□□□ -1.84
SMCHD1-204ENST00000581226 LEMD1Q68G75 181 aa3.57□□□□□ -1.84
SMCHD1-204ENST00000581226 NUFIP2Q7Z417 695 aaKnown RBP3.57□□□□□ -1.84
SMCHD1-204ENST00000581226 FGFRL1Q8N441 504 aa3.57□□□□□ -1.84
SMCHD1-204ENST00000581226 TCP11Q8WWU5 503 aa3.57□□□□□ -1.84
SMCHD1-204ENST00000581226 PCED1BQ96HM7 432 aa3.57□□□□□ -1.84
SMCHD1-204ENST00000581226 C1orf147Q96MC9 270 aaPredicted RBP3.57□□□□□ -1.84
SMCHD1-204ENST00000581226 RUNDC3BQ96NL0 473 aa3.57□□□□□ -1.84
SMCHD1-204ENST00000581226 GUCD1Q96NT3 240 aa3.57□□□□□ -1.84
SMCHD1-204ENST00000581226 SSX3Q99909 188 aa3.57□□□□□ -1.84
SMCHD1-204ENST00000581226 FUT8Q9BYC5 575 aa3.57□□□□□ -1.84
SMCHD1-204ENST00000581226 PNNQ9H307 717 aaKnown RBP3.57□□□□□ -1.84
SMCHD1-204ENST00000581226 LIME1Q9H400 295 aa3.57□□□□□ -1.84
SMCHD1-204ENST00000581226 ZDHHC6Q9H6R6 413 aa3.57□□□□□ -1.84
SMCHD1-204ENST00000581226 SPATA2Q9UM82 520 aa3.57□□□□□ -1.84
SMCHD1-204ENST00000581226 CPQQ9Y646 472 aa3.57□□□□□ -1.84
SMCHD1-204ENST00000581226 TEX48A0A1B0GUV7 120 aa3.56□□□□□ -1.84
SMCHD1-204ENST00000581226 TMEM129A0AVI4 362 aa3.56□□□□□ -1.84
SMCHD1-204ENST00000581226 ZNF724A8MTY0 619 aa3.56□□□□□ -1.84
SMCHD1-204ENST00000581226 KIAA0513O60268 411 aa3.56□□□□□ -1.84
SMCHD1-204ENST00000581226 SEMA4FO95754 770 aa3.56□□□□□ -1.84
SMCHD1-204ENST00000581226 RENP00797 406 aa3.56□□□□□ -1.84
SMCHD1-204ENST00000581226 EPOP01588 193 aa3.56□□□□□ -1.84
SMCHD1-204ENST00000581226 FHP07954 510 aa3.56□□□□□ -1.84
SMCHD1-204ENST00000581226 MELTFP08582 738 aa3.56□□□□□ -1.84
SMCHD1-204ENST00000581226 SBK2P0C263 348 aa3.56□□□□□ -1.84
SMCHD1-204ENST00000581226 SERPINH1P50454 418 aaKnown RBP3.56□□□□□ -1.84
SMCHD1-204ENST00000581226 MFGE8Q08431 387 aaPredicted RBP3.56□□□□□ -1.84
SMCHD1-204ENST00000581226 FUT11Q495W5 492 aa3.56□□□□□ -1.84
SMCHD1-204ENST00000581226 GLRA4Q5JXX5 417 aa3.56□□□□□ -1.84
SMCHD1-204ENST00000581226 KCTD11Q693B1 232 aa3.56□□□□□ -1.84
SMCHD1-204ENST00000581226 MARCH9Q86YJ5 346 aa3.56□□□□□ -1.84
SMCHD1-204ENST00000581226 LRRC49Q8IUZ0 686 aa3.56□□□□□ -1.84
SMCHD1-204ENST00000581226 ZNF781Q8N8C0 355 aa3.56□□□□□ -1.84
SMCHD1-204ENST00000581226 SUMF1Q8NBK3 374 aa3.56□□□□□ -1.84
SMCHD1-204ENST00000581226 ZNRF1Q8ND25 227 aa3.56□□□□□ -1.84
SMCHD1-204ENST00000581226 FAM46BQ96A09 425 aa3.56□□□□□ -1.84
SMCHD1-204ENST00000581226 CDHR1Q96JP9 859 aa3.56□□□□□ -1.84
SMCHD1-204ENST00000581226 HSD17B14Q9BPX1 270 aa3.56□□□□□ -1.84
SMCHD1-204ENST00000581226 NT5DC2Q9H857 520 aa3.56□□□□□ -1.84
SMCHD1-204ENST00000581226 SPG21Q9NZD8 308 aa3.56□□□□□ -1.84
SMCHD1-204ENST00000581226 KCNK6Q9Y257 313 aa3.56□□□□□ -1.84
SMCHD1-204ENST00000581226 FBXO7Q9Y3I1 522 aa3.56□□□□□ -1.84
SMCHD1-204ENST00000581226 TRIM49BA6NDI0 452 aa3.55□□□□□ -1.84
SMCHD1-204ENST00000581226 ZNF840PA6NDX5 716 aa3.55□□□□□ -1.84
SMCHD1-204ENST00000581226 FRAT2O75474 233 aaPredicted RBP3.55□□□□□ -1.84
SMCHD1-204ENST00000581226 CPNE6O95741 557 aa3.55□□□□□ -1.84
SMCHD1-204ENST00000581226 UROSP10746 265 aa3.55□□□□□ -1.84
SMCHD1-204ENST00000581226 VCLP18206 1134 aa3.55□□□□□ -1.84
SMCHD1-204ENST00000581226 GPX3P22352 226 aa3.55□□□□□ -1.84
SMCHD1-204ENST00000581226 GLRA1P23415 457 aa3.55□□□□□ -1.84
SMCHD1-204ENST00000581226 CTNNA1P35221 906 aaKnown RBP3.55□□□□□ -1.84
SMCHD1-204ENST00000581226 CTNNB1P35222 781 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms