RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 ZNF717Q9BY31 904 aaPredicted RBP14.63□□□□□ -0.07
SS18-216ENST00000580751 BRINP2Q9C0B6 783 aa14.63□□□□□ -0.07
SS18-216ENST00000580751 SOX17Q9H6I2 414 aaPredicted RBP14.63□□□□□ -0.07
SS18-216ENST00000580751 DDX31Q9H8H2 851 aaKnown RBP14.63□□□□□ -0.07
SS18-216ENST00000580751 SDR39U1Q9NRG7 319 aaPredicted RBP14.63□□□□□ -0.07
SS18-216ENST00000580751 SEMA3GQ9NS98 782 aa14.63□□□□□ -0.07
SS18-216ENST00000580751 AIG1Q9NVV5 245 aa14.63□□□□□ -0.07
SS18-216ENST00000580751 DAPP1Q9UN19 280 aa14.63□□□□□ -0.07
SS18-216ENST00000580751 MRPS33Q9Y291 106 aaKnown RBP14.63□□□□□ -0.07
SS18-216ENST00000580751 ARHGAP10A1A4S6 786 aa14.62□□□□□ -0.07
SS18-216ENST00000580751 PCDH17O14917 1159 aa14.62□□□□□ -0.07
SS18-216ENST00000580751 SEC22BO75396 215 aa14.62□□□□□ -0.07
SS18-216ENST00000580751 IGHEP01854 428 aa14.62□□□□□ -0.07
SS18-216ENST00000580751 WT1P19544 449 aaPredicted RBP14.62□□□□□ -0.07
SS18-216ENST00000580751 LIM2P55344 173 aa14.62□□□□□ -0.07
SS18-216ENST00000580751 RAB38P57729 211 aa14.62□□□□□ -0.07
SS18-216ENST00000580751 HMGCS1Q01581 520 aa14.62□□□□□ -0.07
SS18-216ENST00000580751 ACSM2AQ08AH3 577 aa14.62□□□□□ -0.07
SS18-216ENST00000580751 VAC14Q08AM6 782 aa14.62□□□□□ -0.07
SS18-216ENST00000580751 TBL3Q12788 808 aaKnown RBP14.62□□□□□ -0.07
SS18-216ENST00000580751 SF3A3Q12874 501 aaKnown RBP eCLIP14.62□□□□□ -0.07
SS18-216ENST00000580751 RUNX2Q13950 521 aa14.62□□□□□ -0.07
SS18-216ENST00000580751 SSPNQ14714 243 aa14.62□□□□□ -0.07
SS18-216ENST00000580751 MAPRE2Q15555 327 aa14.62□□□□□ -0.07
SS18-216ENST00000580751 UGT8Q16880 541 aa14.62□□□□□ -0.07
SS18-216ENST00000580751 MINDY4Q4G0A6 757 aa14.62□□□□□ -0.07
SS18-216ENST00000580751 PDCD4Q53EL6 469 aaKnown RBP14.62□□□□□ -0.07
SS18-216ENST00000580751 ACSM2BQ68CK6 577 aa14.62□□□□□ -0.07
SS18-216ENST00000580751 CYP20A1Q6UW02 462 aa14.62□□□□□ -0.07
SS18-216ENST00000580751 SCIMPQ6UWF3 145 aa14.62□□□□□ -0.07
SS18-216ENST00000580751 SHISA6Q6ZSJ9 500 aa14.62□□□□□ -0.07
SS18-216ENST00000580751 MED25Q71SY5 747 aa14.62□□□□□ -0.07
SS18-216ENST00000580751 COMMD6Q7Z4G1 85 aa14.62□□□□□ -0.07
SS18-216ENST00000580751 PRSS58Q8IYP2 241 aa14.62□□□□□ -0.07
SS18-216ENST00000580751 MIER2Q8N344 545 aa14.62□□□□□ -0.07
SS18-216ENST00000580751 CHTF18Q8WVB6 975 aa14.62□□□□□ -0.07
SS18-216ENST00000580751 ERP27Q96DN0 273 aa14.62□□□□□ -0.07
SS18-216ENST00000580751 CMTM5Q96DZ9 223 aa14.62□□□□□ -0.07
SS18-216ENST00000580751 PPP1R36Q96LQ0 422 aa14.62□□□□□ -0.07
SS18-216ENST00000580751 CCDC106Q9BWC9 280 aa14.62□□□□□ -0.07
SS18-216ENST00000580751 SORBS1Q9BX66 1292 aaKnown RBP14.62□□□□□ -0.07
SS18-216ENST00000580751 RBCK1Q9BYM8 510 aa14.62□□□□□ -0.07
SS18-216ENST00000580751 LYARQ9NX58 379 aaKnown RBP14.62□□□□□ -0.07
SS18-216ENST00000580751 MS4A12Q9NXJ0 267 aa14.62□□□□□ -0.07
SS18-216ENST00000580751 ZIM2Q9NZV7 527 aa14.62□□□□□ -0.07
SS18-216ENST00000580751 PHF11Q9UIL8 331 aa14.62□□□□□ -0.07
SS18-216ENST00000580751 C3orf18Q9UK00 162 aa14.62□□□□□ -0.07
SS18-216ENST00000580751 MKL2Q9ULH7 1088 aa14.62□□□□□ -0.07
SS18-216ENST00000580751 PTGDR2Q9Y5Y4 395 aa14.62□□□□□ -0.07
SS18-216ENST00000580751 CAPN7Q9Y6W3 813 aa14.62□□□□□ -0.07
SS18-216ENST00000580751 ITPR1Q14643 2758 aa14.61□□□□□ -0.07
SS18-216ENST00000580751 A0A0A6YYD5 115 aa14.61□□□□□ -0.07
SS18-216ENST00000580751 DYTNA2CJ06 578 aa14.61□□□□□ -0.07
SS18-216ENST00000580751 BLACEA4D250 179 aa14.61□□□□□ -0.07
SS18-216ENST00000580751 CAPN14A8MX76 684 aa14.61□□□□□ -0.07
SS18-216ENST00000580751 IDSB3KWA1 339 aa14.61□□□□□ -0.07
SS18-216ENST00000580751 K7ENP7 123 aa14.61□□□□□ -0.07
SS18-216ENST00000580751 PRMT3O60678 531 aa14.61□□□□□ -0.07
SS18-216ENST00000580751 DNAJB6O75190 326 aa14.61□□□□□ -0.07
SS18-216ENST00000580751 EEDO75530 441 aaKnown RBP14.61□□□□□ -0.07
SS18-216ENST00000580751 HEXBP07686 556 aa14.61□□□□□ -0.07
SS18-216ENST00000580751 UMODP07911 640 aa14.61□□□□□ -0.07
SS18-216ENST00000580751 MMP11P24347 488 aa14.61□□□□□ -0.07
SS18-216ENST00000580751 MNAT1P51948 309 aa14.61□□□□□ -0.07
SS18-216ENST00000580751 CDC20Q12834 499 aa14.61□□□□□ -0.07
SS18-216ENST00000580751 SLAMF1Q13291 335 aa14.61□□□□□ -0.07
SS18-216ENST00000580751 IL10RAQ13651 578 aa14.61□□□□□ -0.07
SS18-216ENST00000580751 ERV3-1Q14264 604 aa14.61□□□□□ -0.07
SS18-216ENST00000580751 RPS6KA2Q15349 733 aa14.61□□□□□ -0.07
SS18-216ENST00000580751 GALNTL6Q49A17 601 aa14.61□□□□□ -0.07
SS18-216ENST00000580751 RFTN2Q52LD8 501 aaPredicted RBP14.61□□□□□ -0.07
SS18-216ENST00000580751 MFSD4BQ5TF39 518 aa14.61□□□□□ -0.07
SS18-216ENST00000580751 FAM69BQ5VUD6 431 aa14.61□□□□□ -0.07
SS18-216ENST00000580751 INO80CQ6PI98 192 aaPredicted RBP14.61□□□□□ -0.07
SS18-216ENST00000580751 C1orf52Q8N6N3 182 aaKnown RBP14.61□□□□□ -0.07
SS18-216ENST00000580751 GLB1L3Q8NCI6 653 aaPredicted RBP14.61□□□□□ -0.07
SS18-216ENST00000580751 VPS50Q96JG6 964 aa14.61□□□□□ -0.07
SS18-216ENST00000580751 IP6K3Q96PC2 410 aa14.61□□□□□ -0.07
SS18-216ENST00000580751 CPNE5Q9HCH3 593 aa14.61□□□□□ -0.07
SS18-216ENST00000580751 GPR45Q9Y5Y3 372 aa14.61□□□□□ -0.07
SS18-216ENST00000580751 COPG1Q9Y678 874 aaKnown RBP14.61□□□□□ -0.07
SS18-216ENST00000580751 CDC14CA4D256 554 aa14.6□□□□□ -0.07
SS18-216ENST00000580751 CLDN4O14493 209 aa14.6□□□□□ -0.07
SS18-216ENST00000580751 NKX2-8O15522 239 aa14.6□□□□□ -0.07
SS18-216ENST00000580751 GUCY1B2O75343 617 aa14.6□□□□□ -0.07
SS18-216ENST00000580751 JRKO75564 520 aa14.6□□□□□ -0.07
SS18-216ENST00000580751 KLK1P06870 262 aa14.6□□□□□ -0.07
SS18-216ENST00000580751 ALDOCP09972 364 aaKnown RBP14.6□□□□□ -0.07
SS18-216ENST00000580751 TPP2P29144 1249 aaPredicted RBP14.6□□□□□ -0.07
SS18-216ENST00000580751 OTX2P32243 289 aa14.6□□□□□ -0.07
SS18-216ENST00000580751 ASMTP46597 345 aa14.6□□□□□ -0.07
SS18-216ENST00000580751 MAPK12P53778 367 aa14.6□□□□□ -0.07
SS18-216ENST00000580751 EMP2P54851 167 aa14.6□□□□□ -0.07
SS18-216ENST00000580751 FOXL2P58012 376 aa14.6□□□□□ -0.07
SS18-216ENST00000580751 C21orf58P58505 322 aa14.6□□□□□ -0.07
SS18-216ENST00000580751 CCNYL2Q5T2Q4 361 aa14.6□□□□□ -0.07
SS18-216ENST00000580751 TMEM198Q66K66 360 aa14.6□□□□□ -0.07
SS18-216ENST00000580751 NOXRED1Q6NXP6 359 aa14.6□□□□□ -0.07
SS18-216ENST00000580751 GPR180Q86V85 440 aa14.6□□□□□ -0.07
SS18-216ENST00000580751 LAPTM4BQ86VI4 370 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms