RNA–Protein interactions for RNA: ENST00000579316.5

CSNK1D-211, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 692 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-211ENST00000579316 SDCCAG8Q86SQ7 713 aaPredicted RBP12.71□□□□□ -0.37
CSNK1D-211ENST00000579316 PRUNE1Q86TP1 453 aa12.71□□□□□ -0.37
CSNK1D-211ENST00000579316 TMEM132CQ8N3T6 1108 aa12.71□□□□□ -0.37
CSNK1D-211ENST00000579316 PAQR8Q8TEZ7 354 aa12.71□□□□□ -0.37
CSNK1D-211ENST00000579316 DDX47Q9H0S4 455 aaKnown RBP12.71□□□□□ -0.37
CSNK1D-211ENST00000579316 RHBGQ9H310 441 aa12.71□□□□□ -0.37
CSNK1D-211ENST00000579316 CALHM2Q9HA72 323 aa12.71□□□□□ -0.37
CSNK1D-211ENST00000579316 ZNF701Q9NV72 531 aaPredicted RBP12.71□□□□□ -0.37
CSNK1D-211ENST00000579316 C6orf203Q9P0P8 240 aaPredicted RBP12.71□□□□□ -0.37
CSNK1D-211ENST00000579316 NDRG3Q9UGV2 375 aa12.71□□□□□ -0.37
CSNK1D-211ENST00000579316 ZFP69BQ9UJL9 534 aa12.71□□□□□ -0.37
CSNK1D-211ENST00000579316 MEGF8Q7Z7M0 2845 aa12.71□□□□□ -0.37
CSNK1D-211ENST00000579316 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.7□□□□□ -0.38
CSNK1D-211ENST00000579316 E5RI56 91 aa12.7□□□□□ -0.38
CSNK1D-211ENST00000579316 PFDN6O15212 129 aa12.7□□□□□ -0.38
CSNK1D-211ENST00000579316 OR1F1O43749 312 aa12.7□□□□□ -0.38
CSNK1D-211ENST00000579316 NPPBP16860 134 aa12.7□□□□□ -0.38
CSNK1D-211ENST00000579316 AHRP35869 848 aa12.7□□□□□ -0.38
CSNK1D-211ENST00000579316 TRPC1P48995 793 aa12.7□□□□□ -0.38
CSNK1D-211ENST00000579316 PCYT1AP49585 367 aa12.7□□□□□ -0.38
CSNK1D-211ENST00000579316 VPS41P49754 854 aa12.7□□□□□ -0.38
CSNK1D-211ENST00000579316 CCR8P51685 355 aa12.7□□□□□ -0.38
CSNK1D-211ENST00000579316 RAB8AP61006 207 aa12.7□□□□□ -0.38
CSNK1D-211ENST00000579316 RNF4P78317 190 aa12.7□□□□□ -0.38
CSNK1D-211ENST00000579316 DUSP8Q13202 625 aa12.7□□□□□ -0.38
CSNK1D-211ENST00000579316 TNK1Q13470 666 aa12.7□□□□□ -0.38
CSNK1D-211ENST00000579316 TRIP13Q15645 432 aaPredicted RBP12.7□□□□□ -0.38
CSNK1D-211ENST00000579316 ZNF791Q3KP31 576 aaPredicted RBP12.7□□□□□ -0.38
CSNK1D-211ENST00000579316 KRTAP24-1Q3LI83 254 aa12.7□□□□□ -0.38
CSNK1D-211ENST00000579316 SYDE1Q6ZW31 735 aaPredicted RBP12.7□□□□□ -0.38
CSNK1D-211ENST00000579316 UBE2R2Q712K3 238 aaPredicted RBP12.7□□□□□ -0.38
CSNK1D-211ENST00000579316 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.7□□□□□ -0.38
CSNK1D-211ENST00000579316 OTUD6BQ8N6M0 293 aa12.7□□□□□ -0.38
CSNK1D-211ENST00000579316 MORN4Q8NDC4 146 aa12.7□□□□□ -0.38
CSNK1D-211ENST00000579316 OR5L2Q8NGL0 311 aa12.7□□□□□ -0.38
CSNK1D-211ENST00000579316 SFXN3Q9BWM7 321 aa12.7□□□□□ -0.38
CSNK1D-211ENST00000579316 PROK2Q9HC23 129 aa12.7□□□□□ -0.38
CSNK1D-211ENST00000579316 CRYL1Q9Y2S2 319 aa12.7□□□□□ -0.38
CSNK1D-211ENST00000579316 MED16Q9Y2X0 877 aa12.7□□□□□ -0.38
CSNK1D-211ENST00000579316 URADA6NGE7 173 aa12.69□□□□□ -0.38
CSNK1D-211ENST00000579316 C4orf51C9J302 202 aa12.69□□□□□ -0.38
CSNK1D-211ENST00000579316 CD5LO43866 347 aa12.69□□□□□ -0.38
CSNK1D-211ENST00000579316 TMCC2O75069 709 aa12.69□□□□□ -0.38
CSNK1D-211ENST00000579316 SERPIND1P05546 499 aa12.69□□□□□ -0.38
CSNK1D-211ENST00000579316 TMIGD3P0DMS9 266 aaPredicted RBP12.69□□□□□ -0.38
CSNK1D-211ENST00000579316 TPSB2P20231 275 aa12.69□□□□□ -0.38
CSNK1D-211ENST00000579316 NMBRP28336 390 aa12.69□□□□□ -0.38
CSNK1D-211ENST00000579316 MC3RP41968 323 aa12.69□□□□□ -0.38
CSNK1D-211ENST00000579316 SCTRP47872 440 aa12.69□□□□□ -0.38
CSNK1D-211ENST00000579316 KCNJ2P63252 427 aa12.69□□□□□ -0.38
CSNK1D-211ENST00000579316 CKAP4Q07065 602 aaKnown RBP12.69□□□□□ -0.38
CSNK1D-211ENST00000579316 CUL1Q13616 776 aa12.69□□□□□ -0.38
CSNK1D-211ENST00000579316 BMPR2Q13873 1038 aa12.69□□□□□ -0.38
CSNK1D-211ENST00000579316 TPSAB1Q15661 275 aa12.69□□□□□ -0.38
CSNK1D-211ENST00000579316 PHKG1Q16816 387 aa12.69□□□□□ -0.38
CSNK1D-211ENST00000579316 MPEG1Q2M385 716 aa12.69□□□□□ -0.38
CSNK1D-211ENST00000579316 CHRFAM7AQ494W8 412 aa12.69□□□□□ -0.38
CSNK1D-211ENST00000579316 NHSL2Q5HYW2 709 aa12.69□□□□□ -0.38
CSNK1D-211ENST00000579316 SLC22A10Q63ZE4 541 aa12.69□□□□□ -0.38
CSNK1D-211ENST00000579316 VASNQ6EMK4 673 aa12.69□□□□□ -0.38
CSNK1D-211ENST00000579316 AGTRAPQ6RW13 159 aa12.69□□□□□ -0.38
CSNK1D-211ENST00000579316 KLHL7Q8IXQ5 586 aa12.69□□□□□ -0.38
CSNK1D-211ENST00000579316 TBC1D19Q8N5T2 526 aa12.69□□□□□ -0.38
CSNK1D-211ENST00000579316 C9orf106Q8NAJ2 232 aa12.69□□□□□ -0.38
CSNK1D-211ENST00000579316 PTPMT1Q8WUK0 201 aaPredicted RBP12.69□□□□□ -0.38
CSNK1D-211ENST00000579316 DAZLQ92904 295 aaKnown RBP12.69□□□□□ -0.38
CSNK1D-211ENST00000579316 ZFP3Q96NJ6 502 aa12.69□□□□□ -0.38
CSNK1D-211ENST00000579316 HAUS8Q9BT25 410 aa12.69□□□□□ -0.38
CSNK1D-211ENST00000579316 PRTFDC1Q9NRG1 225 aa12.69□□□□□ -0.38
CSNK1D-211ENST00000579316 ASIC3Q9UHC3 531 aa12.69□□□□□ -0.38
CSNK1D-211ENST00000579316 CLCA3PQ9Y6N3 262 aa12.69□□□□□ -0.38
CSNK1D-211ENST00000579316 CR1P17927 2039 aa12.69□□□□□ -0.38
CSNK1D-211ENST00000579316 EIF3FO00303 357 aaPredicted RBP12.68□□□□□ -0.38
CSNK1D-211ENST00000579316 VAPBO95292 243 aa12.68□□□□□ -0.38
CSNK1D-211ENST00000579316 FAM157CP0CG43 387 aa12.68□□□□□ -0.38
CSNK1D-211ENST00000579316 OGNP20774 298 aaKnown RBP12.68□□□□□ -0.38
CSNK1D-211ENST00000579316 CRYGSP22914 178 aa12.68□□□□□ -0.38
CSNK1D-211ENST00000579316 CPA2P48052 419 aa12.68□□□□□ -0.38
CSNK1D-211ENST00000579316 HNRNPFP52597 415 aaKnown RBP12.68□□□□□ -0.38
CSNK1D-211ENST00000579316 DR1Q01658 176 aa12.68□□□□□ -0.38
CSNK1D-211ENST00000579316 FOXF2Q12947 444 aa12.68□□□□□ -0.38
CSNK1D-211ENST00000579316 NAE1Q13564 534 aa12.68□□□□□ -0.38
CSNK1D-211ENST00000579316 DHX34Q14147 1143 aaKnown RBP12.68□□□□□ -0.38
CSNK1D-211ENST00000579316 PIGGQ5H8A4 983 aa12.68□□□□□ -0.38
CSNK1D-211ENST00000579316 PIWIL4Q7Z3Z4 852 aaKnown RBP12.68□□□□□ -0.38
CSNK1D-211ENST00000579316 LUZP2Q86TE4 346 aa12.68□□□□□ -0.38
CSNK1D-211ENST00000579316 TMEM52Q8NDY8 209 aa12.68□□□□□ -0.38
CSNK1D-211ENST00000579316 OR14A16Q8NHC5 309 aa12.68□□□□□ -0.38
CSNK1D-211ENST00000579316 KCNJ9Q92806 393 aa12.68□□□□□ -0.38
CSNK1D-211ENST00000579316 MARK4Q96L34 752 aa12.68□□□□□ -0.38
CSNK1D-211ENST00000579316 TRIB1Q96RU8 372 aa12.68□□□□□ -0.38
CSNK1D-211ENST00000579316 IL22Q9GZX6 179 aa12.68□□□□□ -0.38
CSNK1D-211ENST00000579316 IKBKGQ9Y6K9 419 aa12.68□□□□□ -0.38
CSNK1D-211ENST00000579316 NINQ8N4C6 2090 aa12.68□□□□□ -0.38
CSNK1D-211ENST00000579316 A0A087X1B8 175 aa12.67□□□□□ -0.38
CSNK1D-211ENST00000579316 CTAGE15A4D2H0 777 aa12.67□□□□□ -0.38
CSNK1D-211ENST00000579316 URI1O94763 535 aaPredicted RBP12.67□□□□□ -0.38
CSNK1D-211ENST00000579316 C1QAP02745 245 aa12.67□□□□□ -0.38
CSNK1D-211ENST00000579316 TP53P04637 393 aaPredicted RBP12.67□□□□□ -0.38
CSNK1D-211ENST00000579316 LOXP28300 417 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms