RNA–Protein interactions for RNA: ENST00000578501.5

CSNK1D-208, Transcript of casein kinase 1 delta, human

TSL 2

Gene CSNK1D, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1D-208	ENST00000578501	EMCN	Q9ULC0	261 aa		12.75	□□□□□ -0.37
CSNK1D-208	ENST00000578501	GRID1	Q9ULK0	1009 aa		12.75	□□□□□ -0.37
CSNK1D-208	ENST00000578501	SNX6	Q9UNH7	406 aa		12.75	□□□□□ -0.37
CSNK1D-208	ENST00000578501	STK38L	Q9Y2H1	464 aa		12.75	□□□□□ -0.37
CSNK1D-208	ENST00000578501	COPG1	Q9Y678	874 aa	Known RBP	12.75	□□□□□ -0.37
CSNK1D-208	ENST00000578501	CPAMD8	Q8IZJ3	1885 aa		12.74	□□□□□ -0.37
CSNK1D-208	ENST00000578501	UTP20	O75691	2785 aa	Known RBP	12.74	□□□□□ -0.37
CSNK1D-208	ENST00000578501		A0A1B0GTL3	188 aa		12.74	□□□□□ -0.37
CSNK1D-208	ENST00000578501	PPP6C	O00743	305 aa		12.74	□□□□□ -0.37
CSNK1D-208	ENST00000578501	PROM1	O43490	865 aa		12.74	□□□□□ -0.37
CSNK1D-208	ENST00000578501	MYO1D	O94832	1006 aa		12.74	□□□□□ -0.37
CSNK1D-208	ENST00000578501	ETHE1	O95571	254 aa		12.74	□□□□□ -0.37
CSNK1D-208	ENST00000578501	CPN2	P22792	545 aa		12.74	□□□□□ -0.37
CSNK1D-208	ENST00000578501	PPP2R1B	P30154	601 aa		12.74	□□□□□ -0.37
CSNK1D-208	ENST00000578501	TLX1	P31314	330 aa	Predicted RBP	12.74	□□□□□ -0.37
CSNK1D-208	ENST00000578501	GPR143	P51810	404 aa		12.74	□□□□□ -0.37
CSNK1D-208	ENST00000578501	IGLV3-21	P80748	117 aa	Predicted RBP	12.74	□□□□□ -0.37
CSNK1D-208	ENST00000578501	TNFRSF17	Q02223	184 aa		12.74	□□□□□ -0.37
CSNK1D-208	ENST00000578501	SLC18A2	Q05940	514 aa		12.74	□□□□□ -0.37
CSNK1D-208	ENST00000578501	STX4	Q12846	297 aa		12.74	□□□□□ -0.37
CSNK1D-208	ENST00000578501	ZYG11A	Q6WRX3	759 aa		12.74	□□□□□ -0.37
CSNK1D-208	ENST00000578501	RPS27L	Q71UM5	84 aa	Known RBP	12.74	□□□□□ -0.37
CSNK1D-208	ENST00000578501	RPS19BP1	Q86WX3	136 aa	Known RBP	12.74	□□□□□ -0.37
CSNK1D-208	ENST00000578501	BEST3	Q8N1M1	668 aa		12.74	□□□□□ -0.37
CSNK1D-208	ENST00000578501	TMEM132C	Q8N3T6	1108 aa		12.74	□□□□□ -0.37
CSNK1D-208	ENST00000578501	KIF2B	Q8N4N8	673 aa		12.74	□□□□□ -0.37
CSNK1D-208	ENST00000578501	OR1N1	Q8NGS0	311 aa		12.74	□□□□□ -0.37
CSNK1D-208	ENST00000578501	RDH11	Q8TC12	318 aa		12.74	□□□□□ -0.37
CSNK1D-208	ENST00000578501	TRPC4AP	Q8TEL6	797 aa		12.74	□□□□□ -0.37
CSNK1D-208	ENST00000578501	ANKRD9	Q96BM1	317 aa	Predicted RBP	12.74	□□□□□ -0.37
CSNK1D-208	ENST00000578501	ALOXE3	Q9BYJ1	711 aa		12.74	□□□□□ -0.37
CSNK1D-208	ENST00000578501	ROPN1B	Q9BZX4	212 aa	Predicted RBP	12.74	□□□□□ -0.37
CSNK1D-208	ENST00000578501	RPF2	Q9H7B2	306 aa	Known RBP	12.74	□□□□□ -0.37
CSNK1D-208	ENST00000578501	ROPN1	Q9HAT0	212 aa	Predicted RBP	12.74	□□□□□ -0.37
CSNK1D-208	ENST00000578501	PNO1	Q9NRX1	252 aa	Known RBP	12.74	□□□□□ -0.37
CSNK1D-208	ENST00000578501	AGPAT4	Q9NRZ5	378 aa		12.74	□□□□□ -0.37
CSNK1D-208	ENST00000578501	ASF1B	Q9NVP2	202 aa		12.74	□□□□□ -0.37
CSNK1D-208	ENST00000578501	LYAR	Q9NX58	379 aa	Known RBP	12.74	□□□□□ -0.37
CSNK1D-208	ENST00000578501	AHSP	Q9NZD4	102 aa		12.74	□□□□□ -0.37
CSNK1D-208	ENST00000578501	ZNF225	Q9UK10	706 aa		12.74	□□□□□ -0.37
CSNK1D-208	ENST00000578501	ASB4	Q9Y574	426 aa		12.74	□□□□□ -0.37
CSNK1D-208	ENST00000578501	PCDHGB6	Q9Y5F9	930 aa		12.74	□□□□□ -0.37
CSNK1D-208	ENST00000578501	SMIM23	A6NLE4	172 aa		12.73	□□□□□ -0.37
CSNK1D-208	ENST00000578501		A8MUA0	341 aa		12.73	□□□□□ -0.37
CSNK1D-208	ENST00000578501	FOXO6	A8MYZ6	492 aa		12.73	□□□□□ -0.37
CSNK1D-208	ENST00000578501	TCP11X1	B4DZS4	312 aa		12.73	□□□□□ -0.37
CSNK1D-208	ENST00000578501		G3V2L1	256 aa		12.73	□□□□□ -0.37
CSNK1D-208	ENST00000578501	PRAMEF2	O60811	474 aa		12.73	□□□□□ -0.37
CSNK1D-208	ENST00000578501	EED	O75530	441 aa	Known RBP	12.73	□□□□□ -0.37
CSNK1D-208	ENST00000578501	PROC	P04070	461 aa		12.73	□□□□□ -0.37
CSNK1D-208	ENST00000578501	FAM58BP	P0C7Q3	252 aa		12.73	□□□□□ -0.37
CSNK1D-208	ENST00000578501	MYL2	P10916	166 aa		12.73	□□□□□ -0.37
CSNK1D-208	ENST00000578501	HSD3B1	P14060	373 aa		12.73	□□□□□ -0.37
CSNK1D-208	ENST00000578501	KRT4	P19013	534 aa		12.73	□□□□□ -0.37
CSNK1D-208	ENST00000578501	HSD3B2	P26439	372 aa		12.73	□□□□□ -0.37
CSNK1D-208	ENST00000578501	BUD31	P41223	144 aa	Predicted RBP	12.73	□□□□□ -0.37
CSNK1D-208	ENST00000578501	CLCN2	P51788	898 aa		12.73	□□□□□ -0.37
CSNK1D-208	ENST00000578501	PKNOX1	P55347	436 aa		12.73	□□□□□ -0.37
CSNK1D-208	ENST00000578501	HNRNPH2	P55795	449 aa	Known RBP	12.73	□□□□□ -0.37
CSNK1D-208	ENST00000578501	MLF1	P58340	268 aa		12.73	□□□□□ -0.37
CSNK1D-208	ENST00000578501	DNAJB13	P59910	316 aa		12.73	□□□□□ -0.37
CSNK1D-208	ENST00000578501	LCP2	Q13094	533 aa		12.73	□□□□□ -0.37
CSNK1D-208	ENST00000578501	FCRLB	Q6BAA4	426 aa		12.73	□□□□□ -0.37
CSNK1D-208	ENST00000578501	CYP20A1	Q6UW02	462 aa		12.73	□□□□□ -0.37
CSNK1D-208	ENST00000578501	CLNK	Q7Z7G1	428 aa		12.73	□□□□□ -0.37
CSNK1D-208	ENST00000578501	NUDT13	Q86X67	352 aa		12.73	□□□□□ -0.37
CSNK1D-208	ENST00000578501	MORN4	Q8NDC4	146 aa		12.73	□□□□□ -0.37
CSNK1D-208	ENST00000578501	OR14A16	Q8NHC5	309 aa		12.73	□□□□□ -0.37
CSNK1D-208	ENST00000578501	SUN3	Q8TAQ9	357 aa		12.73	□□□□□ -0.37
CSNK1D-208	ENST00000578501	DAZL	Q92904	295 aa	Known RBP	12.73	□□□□□ -0.37
CSNK1D-208	ENST00000578501	MTFMT	Q96DP5	389 aa	Known RBP	12.73	□□□□□ -0.37
CSNK1D-208	ENST00000578501	VMP1	Q96GC9	406 aa		12.73	□□□□□ -0.37
CSNK1D-208	ENST00000578501	UTP23	Q9BRU9	249 aa	Known RBP	12.73	□□□□□ -0.37
CSNK1D-208	ENST00000578501	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	12.73	□□□□□ -0.37
CSNK1D-208	ENST00000578501	CDCP1	Q9H5V8	836 aa		12.73	□□□□□ -0.37
CSNK1D-208	ENST00000578501	NMRK1	Q9NWW6	199 aa		12.73	□□□□□ -0.37
CSNK1D-208	ENST00000578501	MKS1	Q9NXB0	559 aa		12.73	□□□□□ -0.37
CSNK1D-208	ENST00000578501	LGALS13	Q9UHV8	139 aa		12.73	□□□□□ -0.37
CSNK1D-208	ENST00000578501	FBXW2	Q9UKT8	454 aa		12.73	□□□□□ -0.37
CSNK1D-208	ENST00000578501	NTNG1	Q9Y2I2	539 aa		12.73	□□□□□ -0.37
CSNK1D-208	ENST00000578501	ATG4B	Q9Y4P1	393 aa		12.73	□□□□□ -0.37
CSNK1D-208	ENST00000578501	CLCA3P	Q9Y6N3	262 aa		12.73	□□□□□ -0.37
CSNK1D-208	ENST00000578501	RP1L1	Q8IWN7	2480 aa	Predicted RBP	12.73	□□□□□ -0.37
CSNK1D-208	ENST00000578501		A0A1W2PR48	441 aa		12.72	□□□□□ -0.37
CSNK1D-208	ENST00000578501		H3BQF6	201 aa		12.72	□□□□□ -0.37
CSNK1D-208	ENST00000578501	COPE	O14579	308 aa		12.72	□□□□□ -0.37
CSNK1D-208	ENST00000578501	TMPRSS11D	O60235	418 aa		12.72	□□□□□ -0.37
CSNK1D-208	ENST00000578501	PLIN3	O60664	434 aa		12.72	□□□□□ -0.37
CSNK1D-208	ENST00000578501	LDB3	O75112	727 aa		12.72	□□□□□ -0.37
CSNK1D-208	ENST00000578501	OR4F21	O95013	312 aa		12.72	□□□□□ -0.37
CSNK1D-208	ENST00000578501	PDYN	P01213	254 aa		12.72	□□□□□ -0.37
CSNK1D-208	ENST00000578501	KRT6A	P02538	564 aa		12.72	□□□□□ -0.37
CSNK1D-208	ENST00000578501	KRT6B	P04259	564 aa		12.72	□□□□□ -0.37
CSNK1D-208	ENST00000578501	IFNA16	P05015	189 aa		12.72	□□□□□ -0.37
CSNK1D-208	ENST00000578501	ENO1	P06733	434 aa	Known RBP	12.72	□□□□□ -0.37
CSNK1D-208	ENST00000578501	TUBB	P07437	444 aa		12.72	□□□□□ -0.37
CSNK1D-208	ENST00000578501	TSPAN8	P19075	237 aa		12.72	□□□□□ -0.37
CSNK1D-208	ENST00000578501	COL8A1	P27658	744 aa		12.72	□□□□□ -0.37
CSNK1D-208	ENST00000578501	TRHR	P34981	398 aa	Predicted RBP	12.72	□□□□□ -0.37
CSNK1D-208	ENST00000578501	CD96	P40200	585 aa		12.72	□□□□□ -0.37

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