RNA–Protein interactions for RNA: ENST00000577827.5

PTPRM-205, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 4,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-205ENST00000577827 METTL4Q8N3J2 472 aa9.95□□□□□ -0.82
PTPRM-205ENST00000577827 OLIG1Q8TAK6 271 aa9.95□□□□□ -0.82
PTPRM-205ENST00000577827 MSANTD3Q96H12 275 aa9.95□□□□□ -0.82
PTPRM-205ENST00000577827 OCEL1Q9H607 264 aa9.95□□□□□ -0.82
PTPRM-205ENST00000577827 ZFR2Q9UPR6 939 aaKnown RBP9.95□□□□□ -0.82
PTPRM-205ENST00000577827 PRKAB1Q9Y478 270 aa9.95□□□□□ -0.82
PTPRM-205ENST00000577827 PCDHGB2Q9Y5G2 931 aa9.95□□□□□ -0.82
PTPRM-205ENST00000577827 FXYD6-FXYD2A0A087WZ82 144 aa9.94□□□□□ -0.82
PTPRM-205ENST00000577827 ONECUT3O60422 494 aaPredicted RBP9.94□□□□□ -0.82
PTPRM-205ENST00000577827 SDC1P18827 310 aa9.94□□□□□ -0.82
PTPRM-205ENST00000577827 WNT4P56705 351 aa9.94□□□□□ -0.82
PTPRM-205ENST00000577827 SP3Q02447 781 aa9.94□□□□□ -0.82
PTPRM-205ENST00000577827 SEMA3BQ13214 749 aa9.94□□□□□ -0.82
PTPRM-205ENST00000577827 UBE2UQ5VVX9 321 aa9.94□□□□□ -0.82
PTPRM-205ENST00000577827 SLC25A24Q6NUK1 477 aa9.94□□□□□ -0.82
PTPRM-205ENST00000577827 SNX29P2Q8IUI4 249 aa9.94□□□□□ -0.82
PTPRM-205ENST00000577827 UBQLNLQ8IYU4 475 aa9.94□□□□□ -0.82
PTPRM-205ENST00000577827 CLECL1Q8IZS7 167 aa9.94□□□□□ -0.82
PTPRM-205ENST00000577827 GALNT6Q8NCL4 622 aa9.94□□□□□ -0.82
PTPRM-205ENST00000577827 DBF4BQ8NFT6 615 aa9.94□□□□□ -0.82
PTPRM-205ENST00000577827 OR6K6Q8NGW6 343 aa9.94□□□□□ -0.82
PTPRM-205ENST00000577827 NPLOC4Q8TAT6 608 aa9.94□□□□□ -0.82
PTPRM-205ENST00000577827 SLC22A18Q96BI1 424 aa9.94□□□□□ -0.82
PTPRM-205ENST00000577827 SECISBP2Q96T21 854 aaKnown RBP9.94□□□□□ -0.82
PTPRM-205ENST00000577827 FXYD6Q9H0Q3 95 aa9.94□□□□□ -0.82
PTPRM-205ENST00000577827 NDOR1Q9UHB4 597 aa9.94□□□□□ -0.82
PTPRM-205ENST00000577827 MBLAC1A4D2B0 266 aaPredicted RBP9.94□□□□□ -0.82
PTPRM-205ENST00000577827 POP7O75817 140 aaKnown RBP9.94□□□□□ -0.82
PTPRM-205ENST00000577827 BMP1P13497 986 aa9.94□□□□□ -0.82
PTPRM-205ENST00000577827 ETFAP13804 333 aa9.94□□□□□ -0.82
PTPRM-205ENST00000577827 CTSEP14091 401 aa9.94□□□□□ -0.82
PTPRM-205ENST00000577827 FUT4P22083 530 aa9.94□□□□□ -0.82
PTPRM-205ENST00000577827 APLP1P51693 650 aa9.94□□□□□ -0.82
PTPRM-205ENST00000577827 SF3A2Q15428 464 aaKnown RBP9.94□□□□□ -0.82
PTPRM-205ENST00000577827 ZCCHC12Q6PEW1 402 aa9.94□□□□□ -0.82
PTPRM-205ENST00000577827 PAQR7Q86WK9 346 aa9.94□□□□□ -0.82
PTPRM-205ENST00000577827 MS4A15Q8N5U1 240 aa9.94□□□□□ -0.82
PTPRM-205ENST00000577827 ACBD7Q8N6N7 88 aa9.94□□□□□ -0.82
PTPRM-205ENST00000577827 ZNF676Q8N7Q3 588 aa9.94□□□□□ -0.82
PTPRM-205ENST00000577827 SUN3Q8TAQ9 357 aa9.94□□□□□ -0.82
PTPRM-205ENST00000577827 LCN9Q8WX39 176 aa9.94□□□□□ -0.82
PTPRM-205ENST00000577827 TFGQ92734 400 aaPredicted RBP9.94□□□□□ -0.82
PTPRM-205ENST00000577827 RAB8BQ92930 207 aa9.94□□□□□ -0.82
PTPRM-205ENST00000577827 TMEM106CQ9BVX2 250 aa9.94□□□□□ -0.82
PTPRM-205ENST00000577827 NT5DC2Q9H857 520 aa9.94□□□□□ -0.82
PTPRM-205ENST00000577827 LYARQ9NX58 379 aaKnown RBP9.94□□□□□ -0.82
PTPRM-205ENST00000577827 IL36AQ9UHA7 158 aa9.94□□□□□ -0.82
PTPRM-205ENST00000577827 TAC3Q9UHF0 121 aa9.94□□□□□ -0.82
PTPRM-205ENST00000577827 NUFIP1Q9UHK0 495 aaKnown RBP9.94□□□□□ -0.82
PTPRM-205ENST00000577827 SMIM30A4D0T7 59 aa9.94□□□□□ -0.82
PTPRM-205ENST00000577827 DRGXA6NNA5 263 aa9.94□□□□□ -0.82
PTPRM-205ENST00000577827 CLDN4O14493 209 aa9.94□□□□□ -0.82
PTPRM-205ENST00000577827 ERI3O43414 337 aaKnown RBP9.94□□□□□ -0.82
PTPRM-205ENST00000577827 IL1AP01583 271 aa9.94□□□□□ -0.82
PTPRM-205ENST00000577827 H2AFB2P0C5Z0 115 aa9.94□□□□□ -0.82
PTPRM-205ENST00000577827 AMD1P17707 334 aa9.94□□□□□ -0.82
PTPRM-205ENST00000577827 SNTB2Q13425 540 aaKnown RBP9.94□□□□□ -0.82
PTPRM-205ENST00000577827 LRRC73Q5JTD7 316 aa9.94□□□□□ -0.82
PTPRM-205ENST00000577827 SLC22A10Q63ZE4 541 aa9.94□□□□□ -0.82
PTPRM-205ENST00000577827 GRHL2Q6ISB3 625 aa9.94□□□□□ -0.82
PTPRM-205ENST00000577827 SCD5Q86SK9 330 aa9.94□□□□□ -0.82
PTPRM-205ENST00000577827 SDR16C5Q8N3Y7 309 aa9.94□□□□□ -0.82
PTPRM-205ENST00000577827 TRAM1L1Q8N609 369 aa9.94□□□□□ -0.82
PTPRM-205ENST00000577827 ARRDC2Q8TBH0 407 aa9.94□□□□□ -0.82
PTPRM-205ENST00000577827 GPR151Q8TDV0 419 aa9.94□□□□□ -0.82
PTPRM-205ENST00000577827 SETD7Q8WTS6 366 aaKnown RBP9.94□□□□□ -0.82
PTPRM-205ENST00000577827 BRI3BPQ8WY22 251 aa9.94□□□□□ -0.82
PTPRM-205ENST00000577827 APIPQ96GX9 242 aa9.94□□□□□ -0.82
PTPRM-205ENST00000577827 ZNF354BQ96LW1 612 aa9.94□□□□□ -0.82
PTPRM-205ENST00000577827 C12orf66Q96MD2 445 aa9.94□□□□□ -0.82
PTPRM-205ENST00000577827 MCHR1Q99705 422 aa9.94□□□□□ -0.82
PTPRM-205ENST00000577827 YIPF4Q9BSR8 244 aa9.94□□□□□ -0.82
PTPRM-205ENST00000577827 DUS2Q9NX74 493 aaKnown RBP9.94□□□□□ -0.82
PTPRM-205ENST00000577827 PTTG3PQ9NZH4 202 aa9.94□□□□□ -0.82
PTPRM-205ENST00000577827 IL37Q9NZH6 218 aa9.94□□□□□ -0.82
PTPRM-205ENST00000577827 GOLGA4Q13439 2230 aaKnown RBP9.94□□□□□ -0.82
PTPRM-205ENST00000577827 OR2AT4A6NND4 320 aa9.94□□□□□ -0.82
PTPRM-205ENST00000577827 RNASET2O00584 256 aaKnown RBP9.94□□□□□ -0.82
PTPRM-205ENST00000577827 EEF1E1O43324 174 aaKnown RBP9.94□□□□□ -0.82
PTPRM-205ENST00000577827 GBAP04062 536 aa9.94□□□□□ -0.82
PTPRM-205ENST00000577827 SLC6A6P31641 620 aa9.94□□□□□ -0.82
PTPRM-205ENST00000577827 LRRTM4Q86VH4 590 aa9.94□□□□□ -0.82
PTPRM-205ENST00000577827 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.94□□□□□ -0.82
PTPRM-205ENST00000577827 B3GNT7Q8NFL0 401 aa9.94□□□□□ -0.82
PTPRM-205ENST00000577827 OR51G2Q8NGK0 314 aa9.94□□□□□ -0.82
PTPRM-205ENST00000577827 ZNF461Q8TAF7 563 aa9.94□□□□□ -0.82
PTPRM-205ENST00000577827 ZBED3Q96IU2 234 aaPredicted RBP9.94□□□□□ -0.82
PTPRM-205ENST00000577827 GPR78Q96P69 363 aa9.94□□□□□ -0.82
PTPRM-205ENST00000577827 CPPED1Q9BRF8 314 aaPredicted RBP9.94□□□□□ -0.82
PTPRM-205ENST00000577827 CACNG6Q9BXT2 260 aa9.94□□□□□ -0.82
PTPRM-205ENST00000577827 ADAP2Q9NPF8 381 aa9.94□□□□□ -0.82
PTPRM-205ENST00000577827 SLAMF8Q9P0V8 285 aa9.94□□□□□ -0.82
PTPRM-205ENST00000577827 ZBTB42B2RXF5 422 aa9.93□□□□□ -0.82
PTPRM-205ENST00000577827 H7C2Y5 167 aa9.93□□□□□ -0.82
PTPRM-205ENST00000577827 RGS9O75916 674 aaPredicted RBP9.93□□□□□ -0.82
PTPRM-205ENST00000577827 GSRP00390 522 aa9.93□□□□□ -0.82
PTPRM-205ENST00000577827 TNFSF8P32971 234 aa9.93□□□□□ -0.82
PTPRM-205ENST00000577827 RAB2AP61019 212 aa9.93□□□□□ -0.82
PTPRM-205ENST00000577827 LASP1Q14847 261 aaKnown RBP9.93□□□□□ -0.82
PTPRM-205ENST00000577827 ARSIQ5FYB1 569 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms