RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 PLEKHN1Q494U1 663 aaPredicted RBP18.07■□□□□ 0.48
SS18-208ENST00000577751 CFAP157Q5JU67 520 aa18.07■□□□□ 0.48
SS18-208ENST00000577751 BEND6Q5SZJ8 279 aaPredicted RBP18.07■□□□□ 0.48
SS18-208ENST00000577751 C18orf63Q68DL7 685 aa18.07■□□□□ 0.48
SS18-208ENST00000577751 CYP20A1Q6UW02 462 aa18.07■□□□□ 0.48
SS18-208ENST00000577751 CLNKQ7Z7G1 428 aa18.07■□□□□ 0.48
SS18-208ENST00000577751 CROCCP2Q86T23 111 aa18.07■□□□□ 0.48
SS18-208ENST00000577751 EFCAB3Q8N7B9 438 aa18.07■□□□□ 0.48
SS18-208ENST00000577751 GBP7Q8N8V2 638 aaPredicted RBP18.07■□□□□ 0.48
SS18-208ENST00000577751 HAS2Q92819 552 aa18.07■□□□□ 0.48
SS18-208ENST00000577751 TANKQ92844 425 aa18.07■□□□□ 0.48
SS18-208ENST00000577751 KCNA7Q96RP8 456 aa18.07■□□□□ 0.48
SS18-208ENST00000577751 HBEGFQ99075 208 aa18.07■□□□□ 0.48
SS18-208ENST00000577751 ALOXE3Q9BYJ1 711 aa18.07■□□□□ 0.48
SS18-208ENST00000577751 RNF32Q9H0A6 362 aa18.07■□□□□ 0.48
SS18-208ENST00000577751 KCNK13Q9HB14 408 aa18.07■□□□□ 0.48
SS18-208ENST00000577751 ADAP2Q9NPF8 381 aa18.07■□□□□ 0.48
SS18-208ENST00000577751 NMRK1Q9NWW6 199 aa18.07■□□□□ 0.48
SS18-208ENST00000577751 TIMM22Q9Y584 194 aa18.07■□□□□ 0.48
SS18-208ENST00000577751 ERLIN1O75477 346 aa18.06■□□□□ 0.48
SS18-208ENST00000577751 GBAP04062 536 aa18.06■□□□□ 0.48
SS18-208ENST00000577751 KLK1P06870 262 aa18.06■□□□□ 0.48
SS18-208ENST00000577751 ALDH3A1P30838 453 aa18.06■□□□□ 0.48
SS18-208ENST00000577751 TLX1P31314 330 aaPredicted RBP18.06■□□□□ 0.48
SS18-208ENST00000577751 BUD31P41223 144 aaPredicted RBP18.06■□□□□ 0.48
SS18-208ENST00000577751 STX4Q12846 297 aa18.06■□□□□ 0.48
SS18-208ENST00000577751 ELAVL1Q15717 326 aaKnown RBP18.06■□□□□ 0.48
SS18-208ENST00000577751 CEP85LQ5SZL2 805 aa18.06■□□□□ 0.48
SS18-208ENST00000577751 LRIG3Q6UXM1 1119 aa18.06■□□□□ 0.48
SS18-208ENST00000577751 PAGE2Q7Z2X7 111 aa18.06■□□□□ 0.48
SS18-208ENST00000577751 COMMD6Q7Z4G1 85 aa18.06■□□□□ 0.48
SS18-208ENST00000577751 EXOC3L1Q86VI1 746 aa18.06■□□□□ 0.48
SS18-208ENST00000577751 APCDD1LQ8NCL9 501 aa18.06■□□□□ 0.48
SS18-208ENST00000577751 B3GNT7Q8NFL0 401 aa18.06■□□□□ 0.48
SS18-208ENST00000577751 CNDP1Q96KN2 507 aa18.06■□□□□ 0.48
SS18-208ENST00000577751 ZNF354BQ96LW1 612 aa18.06■□□□□ 0.48
SS18-208ENST00000577751 NPAS2Q99743 824 aa18.06■□□□□ 0.48
SS18-208ENST00000577751 GATA5Q9BWX5 397 aaPredicted RBP18.06■□□□□ 0.48
SS18-208ENST00000577751 TNFRSF12AQ9NP84 129 aa18.06■□□□□ 0.48
SS18-208ENST00000577751 PNO1Q9NRX1 252 aaKnown RBP18.06■□□□□ 0.48
SS18-208ENST00000577751 VPS29Q9UBQ0 182 aa18.06■□□□□ 0.48
SS18-208ENST00000577751 TEKT2Q9UIF3 430 aa18.06■□□□□ 0.48
SS18-208ENST00000577751 A8MUI8 341 aa18.05■□□□□ 0.48
SS18-208ENST00000577751 FGF17O60258 216 aa18.05■□□□□ 0.48
SS18-208ENST00000577751 MYO1DO94832 1006 aa18.05■□□□□ 0.48
SS18-208ENST00000577751 CHN1P15882 459 aa18.05■□□□□ 0.48
SS18-208ENST00000577751 ETV4P43268 484 aa18.05■□□□□ 0.48
SS18-208ENST00000577751 ASPHQ12797 758 aa18.05■□□□□ 0.48
SS18-208ENST00000577751 BIKQ13323 160 aa18.05■□□□□ 0.48
SS18-208ENST00000577751 LGI4Q8N135 537 aa18.05■□□□□ 0.48
SS18-208ENST00000577751 KIF2BQ8N4N8 673 aa18.05■□□□□ 0.48
SS18-208ENST00000577751 DNAJB14Q8TBM8 379 aa18.05■□□□□ 0.48
SS18-208ENST00000577751 PTPMT1Q8WUK0 201 aaPredicted RBP18.05■□□□□ 0.48
SS18-208ENST00000577751 CHTF18Q8WVB6 975 aa18.05■□□□□ 0.48
SS18-208ENST00000577751 PGM2Q96G03 612 aa18.05■□□□□ 0.48
SS18-208ENST00000577751 TRMOQ9BU70 441 aa18.05■□□□□ 0.48
SS18-208ENST00000577751 ACPTQ9BZG2 426 aa18.05■□□□□ 0.48
SS18-208ENST00000577751 SSU72Q9NP77 194 aaKnown RBP18.05■□□□□ 0.48
SS18-208ENST00000577751 STMN3Q9NZ72 180 aa18.05■□□□□ 0.48
SS18-208ENST00000577751 CNTRLQ7Z7A1 2325 aa18.04■□□□□ 0.48
SS18-208ENST00000577751 J3QKU1 62 aa18.04■□□□□ 0.48
SS18-208ENST00000577751 PRKRAO75569 313 aaKnown RBP18.04■□□□□ 0.48
SS18-208ENST00000577751 MLLT10P55197 1068 aa18.04■□□□□ 0.48
SS18-208ENST00000577751 FOLH1Q04609 750 aa18.04■□□□□ 0.48
SS18-208ENST00000577751 MEP1AQ16819 746 aa18.04■□□□□ 0.48
SS18-208ENST00000577751 ACER2Q5QJU3 275 aa18.04■□□□□ 0.48
SS18-208ENST00000577751 CCNYL2Q5T2Q4 361 aa18.04■□□□□ 0.48
SS18-208ENST00000577751 ABHD17BQ5VST6 288 aa18.04■□□□□ 0.48
SS18-208ENST00000577751 CUZD1Q86UP6 607 aa18.04■□□□□ 0.48
SS18-208ENST00000577751 CRLF3Q8IUI8 442 aa18.04■□□□□ 0.48
SS18-208ENST00000577751 OR4N5Q8IXE1 308 aa18.04■□□□□ 0.48
SS18-208ENST00000577751 ARMC10Q8N2F6 343 aa18.04■□□□□ 0.48
SS18-208ENST00000577751 TMEM132CQ8N3T6 1108 aa18.04■□□□□ 0.48
SS18-208ENST00000577751 SLC5A8Q8N695 610 aa18.04■□□□□ 0.48
SS18-208ENST00000577751 C1orf52Q8N6N3 182 aaKnown RBP18.04■□□□□ 0.48
SS18-208ENST00000577751 CATSPER1Q8NEC5 780 aa18.04■□□□□ 0.48
SS18-208ENST00000577751 C11orf24Q96F05 449 aaPredicted RBP18.04■□□□□ 0.48
SS18-208ENST00000577751 MECRQ9BV79 373 aa18.04■□□□□ 0.48
SS18-208ENST00000577751 SLAMF7Q9NQ25 335 aa18.04■□□□□ 0.48
SS18-208ENST00000577751 TEX10Q9NXF1 929 aaPredicted RBP18.04■□□□□ 0.48
SS18-208ENST00000577751 PLA2G3Q9NZ20 509 aa18.04■□□□□ 0.48
SS18-208ENST00000577751 LUZP4Q9P127 313 aa18.04■□□□□ 0.48
SS18-208ENST00000577751 MYOCOSA0A1B0GUC4 107 aa18.03■□□□□ 0.48
SS18-208ENST00000577751 DYTNA2CJ06 578 aa18.03■□□□□ 0.48
SS18-208ENST00000577751 TTLL8A6PVC2 850 aa18.03■□□□□ 0.48
SS18-208ENST00000577751 WASHC1A8K0Z3 465 aa18.03■□□□□ 0.48
SS18-208ENST00000577751 CTIFO43310 598 aaKnown RBP18.03■□□□□ 0.48
SS18-208ENST00000577751 NPHS1O60500 1241 aa18.03■□□□□ 0.48
SS18-208ENST00000577751 AIFM1O95831 613 aa18.03■□□□□ 0.48
SS18-208ENST00000577751 WDPCPO95876 746 aa18.03■□□□□ 0.48
SS18-208ENST00000577751 IFNA16P05015 189 aa18.03■□□□□ 0.48
SS18-208ENST00000577751 NR2F6P10588 404 aa18.03■□□□□ 0.48
SS18-208ENST00000577751 UROSP10746 265 aa18.03■□□□□ 0.48
SS18-208ENST00000577751 STT3AP46977 705 aa18.03■□□□□ 0.48
SS18-208ENST00000577751 TNFSF10P50591 281 aa18.03■□□□□ 0.48
SS18-208ENST00000577751 TAS2R50P59544 299 aa18.03■□□□□ 0.48
SS18-208ENST00000577751 ARG2P78540 354 aa18.03■□□□□ 0.48
SS18-208ENST00000577751 ID2Q02363 134 aa18.03■□□□□ 0.48
SS18-208ENST00000577751 TLR1Q15399 786 aa18.03■□□□□ 0.48
SS18-208ENST00000577751 FCRLBQ6BAA4 426 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms