RNA–Protein interactions for RNA: ENST00000577435.5

GGA3-203, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-203ENST00000577435 MYO1DO94832 1006 aa13.04□□□□□ -0.32
GGA3-203ENST00000577435 MLYCDO95822 493 aa13.04□□□□□ -0.32
GGA3-203ENST00000577435 PROCP04070 461 aa13.04□□□□□ -0.32
GGA3-203ENST00000577435 HSD3B1P14060 373 aa13.04□□□□□ -0.32
GGA3-203ENST00000577435 HSD3B2P26439 372 aa13.04□□□□□ -0.32
GGA3-203ENST00000577435 CLCN2P51788 898 aa13.04□□□□□ -0.32
GGA3-203ENST00000577435 HNRNPH2P55795 449 aaKnown RBP13.04□□□□□ -0.32
GGA3-203ENST00000577435 MLF1P58340 268 aa13.04□□□□□ -0.32
GGA3-203ENST00000577435 STX4Q12846 297 aa13.04□□□□□ -0.32
GGA3-203ENST00000577435 INAQ16352 499 aa13.04□□□□□ -0.32
GGA3-203ENST00000577435 FCRLBQ6BAA4 426 aa13.04□□□□□ -0.32
GGA3-203ENST00000577435 CLEC18BQ6UXF7 455 aa13.04□□□□□ -0.32
GGA3-203ENST00000577435 ZYG11AQ6WRX3 759 aa13.04□□□□□ -0.32
GGA3-203ENST00000577435 CLNKQ7Z7G1 428 aa13.04□□□□□ -0.32
GGA3-203ENST00000577435 NUDT13Q86X67 352 aa13.04□□□□□ -0.32
GGA3-203ENST00000577435 BEST3Q8N1M1 668 aa13.04□□□□□ -0.32
GGA3-203ENST00000577435 METTL4Q8N3J2 472 aa13.04□□□□□ -0.32
GGA3-203ENST00000577435 KIF2BQ8N4N8 673 aa13.04□□□□□ -0.32
GGA3-203ENST00000577435 MREGQ8N565 214 aa13.04□□□□□ -0.32
GGA3-203ENST00000577435 CLEC18CQ8NCF0 446 aa13.04□□□□□ -0.32
GGA3-203ENST00000577435 MORN4Q8NDC4 146 aa13.04□□□□□ -0.32
GGA3-203ENST00000577435 RDH11Q8TC12 318 aa13.04□□□□□ -0.32
GGA3-203ENST00000577435 PTPMT1Q8WUK0 201 aaPredicted RBP13.04□□□□□ -0.32
GGA3-203ENST00000577435 DAZLQ92904 295 aaKnown RBP13.04□□□□□ -0.32
GGA3-203ENST00000577435 VMP1Q96GC9 406 aa13.04□□□□□ -0.32
GGA3-203ENST00000577435 PARD6BQ9BYG5 372 aa13.04□□□□□ -0.32
GGA3-203ENST00000577435 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.04□□□□□ -0.32
GGA3-203ENST00000577435 CDCP1Q9H5V8 836 aa13.04□□□□□ -0.32
GGA3-203ENST00000577435 RPF2Q9H7B2 306 aaKnown RBP13.04□□□□□ -0.32
GGA3-203ENST00000577435 TRIM45Q9H8W5 580 aaPredicted RBP13.04□□□□□ -0.32
GGA3-203ENST00000577435 AGPAT4Q9NRZ5 378 aa13.04□□□□□ -0.32
GGA3-203ENST00000577435 NTNG1Q9Y2I2 539 aa13.04□□□□□ -0.32
GGA3-203ENST00000577435 ASH1LQ9NR48 2969 aaKnown RBP13.04□□□□□ -0.32
GGA3-203ENST00000577435 PTPN13Q12923 2485 aa13.03□□□□□ -0.32
GGA3-203ENST00000577435 SMIM23A6NLE4 172 aa13.03□□□□□ -0.32
GGA3-203ENST00000577435 TCP11X1B4DZS4 312 aa13.03□□□□□ -0.32
GGA3-203ENST00000577435 COPEO14579 308 aa13.03□□□□□ -0.32
GGA3-203ENST00000577435 TMPRSS11DO60235 418 aa13.03□□□□□ -0.32
GGA3-203ENST00000577435 MAN1A2O60476 641 aa13.03□□□□□ -0.32
GGA3-203ENST00000577435 PRAMEF2O60811 474 aa13.03□□□□□ -0.32
GGA3-203ENST00000577435 LDB3O75112 727 aa13.03□□□□□ -0.32
GGA3-203ENST00000577435 OR4F21O95013 312 aa13.03□□□□□ -0.32
GGA3-203ENST00000577435 CBX6O95503 412 aa13.03□□□□□ -0.32
GGA3-203ENST00000577435 PDYNP01213 254 aa13.03□□□□□ -0.32
GGA3-203ENST00000577435 FAM58BPP0C7Q3 252 aa13.03□□□□□ -0.32
GGA3-203ENST00000577435 MYL2P10916 166 aa13.03□□□□□ -0.32
GGA3-203ENST00000577435 KRT4P19013 534 aa13.03□□□□□ -0.32
GGA3-203ENST00000577435 TSPAN8P19075 237 aa13.03□□□□□ -0.32
GGA3-203ENST00000577435 PPP2R1BP30154 601 aa13.03□□□□□ -0.32
GGA3-203ENST00000577435 TRHRP34981 398 aaPredicted RBP13.03□□□□□ -0.32
GGA3-203ENST00000577435 CD96P40200 585 aa13.03□□□□□ -0.32
GGA3-203ENST00000577435 BUD31P41223 144 aaPredicted RBP13.03□□□□□ -0.32
GGA3-203ENST00000577435 PKNOX1P55347 436 aa13.03□□□□□ -0.32
GGA3-203ENST00000577435 DNAJB13P59910 316 aa13.03□□□□□ -0.32
GGA3-203ENST00000577435 TNFRSF17Q02223 184 aa13.03□□□□□ -0.32
GGA3-203ENST00000577435 LCP2Q13094 533 aa13.03□□□□□ -0.32
GGA3-203ENST00000577435 TUBA3CQ13748 450 aa13.03□□□□□ -0.32
GGA3-203ENST00000577435 ERCC6LQ2NKX8 1250 aa13.03□□□□□ -0.32
GGA3-203ENST00000577435 TUBA3EQ6PEY2 450 aa13.03□□□□□ -0.32
GGA3-203ENST00000577435 CYP20A1Q6UW02 462 aa13.03□□□□□ -0.32
GGA3-203ENST00000577435 GPRIN3Q6ZVF9 776 aa13.03□□□□□ -0.32
GGA3-203ENST00000577435 PAGE2Q7Z2X7 111 aa13.03□□□□□ -0.32
GGA3-203ENST00000577435 OR14A16Q8NHC5 309 aa13.03□□□□□ -0.32
GGA3-203ENST00000577435 SUN3Q8TAQ9 357 aa13.03□□□□□ -0.32
GGA3-203ENST00000577435 FAR1Q8WVX9 515 aa13.03□□□□□ -0.32
GGA3-203ENST00000577435 SELENOMQ8WWX9 145 aa13.03□□□□□ -0.32
GGA3-203ENST00000577435 UTP23Q9BRU9 249 aaKnown RBP13.03□□□□□ -0.32
GGA3-203ENST00000577435 TMEM109Q9BVC6 243 aa13.03□□□□□ -0.32
GGA3-203ENST00000577435 DEFB126Q9BYW3 111 aa13.03□□□□□ -0.32
GGA3-203ENST00000577435 FARSBQ9NSD9 589 aaKnown RBP13.03□□□□□ -0.32
GGA3-203ENST00000577435 NMRK1Q9NWW6 199 aa13.03□□□□□ -0.32
GGA3-203ENST00000577435 LGALS13Q9UHV8 139 aa13.03□□□□□ -0.32
GGA3-203ENST00000577435 ZNF223Q9UK11 482 aaPredicted RBP13.03□□□□□ -0.32
GGA3-203ENST00000577435 RAB21Q9UL25 225 aa13.03□□□□□ -0.32
GGA3-203ENST00000577435 CLCA3PQ9Y6N3 262 aa13.03□□□□□ -0.32
GGA3-203ENST00000577435 A0A1W2PR48 441 aa13.02□□□□□ -0.33
GGA3-203ENST00000577435 TLDC2A0PJX2 215 aa13.02□□□□□ -0.33
GGA3-203ENST00000577435 SERTM1A2A2V5 107 aa13.02□□□□□ -0.33
GGA3-203ENST00000577435 GABRR3A8MPY1 467 aa13.02□□□□□ -0.33
GGA3-203ENST00000577435 H3BQF6 201 aa13.02□□□□□ -0.33
GGA3-203ENST00000577435 MANBAO00462 879 aa13.02□□□□□ -0.33
GGA3-203ENST00000577435 FGF17O60258 216 aa13.02□□□□□ -0.33
GGA3-203ENST00000577435 ZFAND5O76080 213 aa13.02□□□□□ -0.33
GGA3-203ENST00000577435 ESRRBO95718 433 aa13.02□□□□□ -0.33
GGA3-203ENST00000577435 KRT6AP02538 564 aa13.02□□□□□ -0.33
GGA3-203ENST00000577435 KRT6BP04259 564 aa13.02□□□□□ -0.33
GGA3-203ENST00000577435 IFNA16P05015 189 aa13.02□□□□□ -0.33
GGA3-203ENST00000577435 ENO1P06733 434 aaKnown RBP13.02□□□□□ -0.33
GGA3-203ENST00000577435 TUBBP07437 444 aa13.02□□□□□ -0.33
GGA3-203ENST00000577435 GNLYP22749 145 aa13.02□□□□□ -0.33
GGA3-203ENST00000577435 TPP2P29144 1249 aaPredicted RBP13.02□□□□□ -0.33
GGA3-203ENST00000577435 STT3AP46977 705 aa13.02□□□□□ -0.33
GGA3-203ENST00000577435 KRT6CP48668 564 aa13.02□□□□□ -0.33
GGA3-203ENST00000577435 C18orf63Q68DL7 685 aa13.02□□□□□ -0.33
GGA3-203ENST00000577435 ZNF324BQ6AW86 544 aaPredicted RBP13.02□□□□□ -0.33
GGA3-203ENST00000577435 TRABD2AQ86V40 505 aa13.02□□□□□ -0.33
GGA3-203ENST00000577435 HORMAD2Q8N7B1 307 aa13.02□□□□□ -0.33
GGA3-203ENST00000577435 CDYL2Q8N8U2 506 aa13.02□□□□□ -0.33
GGA3-203ENST00000577435 MDS2Q8NDY4 140 aa13.02□□□□□ -0.33
GGA3-203ENST00000577435 OR8K3Q8NH51 312 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms