RNA–Protein interactions for RNA: ENST00000574872.1

PFN1-203, Transcript of profilin 1, humanhuman

TSL 2 BASIC

Gene PFN1, Length 1,173 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-203ENST00000574872 TRIM55Q9BYV6 548 aa15.27■□□□□ 0.04
PFN1-203ENST00000574872 ING2Q9H160 280 aa15.27■□□□□ 0.04
PFN1-203ENST00000574872 RPF2Q9H7B2 306 aaKnown RBP15.27■□□□□ 0.04
PFN1-203ENST00000574872 ZNF160Q9HCG1 818 aa15.27■□□□□ 0.04
PFN1-203ENST00000574872 MED4Q9NPJ6 270 aa15.27■□□□□ 0.04
PFN1-203ENST00000574872 C1orf109Q9NX04 203 aa15.27■□□□□ 0.04
PFN1-203ENST00000574872 MCM8Q9UJA3 840 aa15.27■□□□□ 0.04
PFN1-203ENST00000574872 LHX6Q9UPM6 363 aa15.27■□□□□ 0.04
PFN1-203ENST00000574872 IGKV3D-11A0A0A0MRZ8 115 aa15.26■□□□□ 0.03
PFN1-203ENST00000574872 IGHV1-45A0A0A0MS14 117 aa15.26■□□□□ 0.03
PFN1-203ENST00000574872 A8MUA0 341 aa15.26■□□□□ 0.03
PFN1-203ENST00000574872 LSM1O15116 133 aaKnown RBP15.26■□□□□ 0.03
PFN1-203ENST00000574872 FGF17O60258 216 aa15.26■□□□□ 0.03
PFN1-203ENST00000574872 SNUPNO95149 360 aaKnown RBP15.26■□□□□ 0.03
PFN1-203ENST00000574872 CYC1P08574 325 aa15.26■□□□□ 0.03
PFN1-203ENST00000574872 PPP2R1BP30154 601 aa15.26■□□□□ 0.03
PFN1-203ENST00000574872 HSD17B7P56937 341 aa15.26■□□□□ 0.03
PFN1-203ENST00000574872 TAS2R50P59544 299 aa15.26■□□□□ 0.03
PFN1-203ENST00000574872 RPL38P63173 70 aaKnown RBP15.26■□□□□ 0.03
PFN1-203ENST00000574872 OCRLQ01968 901 aa15.26■□□□□ 0.03
PFN1-203ENST00000574872 PCOLCEQ15113 449 aa15.26■□□□□ 0.03
PFN1-203ENST00000574872 XKR7Q5GH72 579 aa15.26■□□□□ 0.03
PFN1-203ENST00000574872 DCAF10Q5QP82 559 aa15.26■□□□□ 0.03
PFN1-203ENST00000574872 NDUFAF5Q5TEU4 345 aa15.26■□□□□ 0.03
PFN1-203ENST00000574872 MED25Q71SY5 747 aa15.26■□□□□ 0.03
PFN1-203ENST00000574872 APOBEC4Q8WW27 367 aaKnown RBP15.26■□□□□ 0.03
PFN1-203ENST00000574872 NACC2Q96BF6 587 aa15.26■□□□□ 0.03
PFN1-203ENST00000574872 TM4SF18Q96CE8 201 aa15.26■□□□□ 0.03
PFN1-203ENST00000574872 VPS50Q96JG6 964 aa15.26■□□□□ 0.03
PFN1-203ENST00000574872 FER1L6-AS2Q96M78 137 aa15.26■□□□□ 0.03
PFN1-203ENST00000574872 WDR41Q9HAD4 459 aa15.26■□□□□ 0.03
PFN1-203ENST00000574872 C5AR2Q9P296 337 aa15.26■□□□□ 0.03
PFN1-203ENST00000574872 HAO1Q9UJM8 370 aa15.26■□□□□ 0.03
PFN1-203ENST00000574872 CLDN16Q9Y5I7 305 aa15.26■□□□□ 0.03
PFN1-203ENST00000574872 MED13Q9UHV7 2174 aa15.25■□□□□ 0.03
PFN1-203ENST00000574872 LOC102723996A0A087X1L8 192 aa15.25■□□□□ 0.03
PFN1-203ENST00000574872 NSG1A0A0A6YYJ2 146 aa15.25■□□□□ 0.03
PFN1-203ENST00000574872 TCRBV16S1A1N1A0A5B0 115 aa15.25■□□□□ 0.03
PFN1-203ENST00000574872 A6NL46 340 aa15.25■□□□□ 0.03
PFN1-203ENST00000574872 KLF11O14901 512 aa15.25■□□□□ 0.03
PFN1-203ENST00000574872 PGRMC2O15173 223 aa15.25■□□□□ 0.03
PFN1-203ENST00000574872 CTNSO60931 367 aa15.25■□□□□ 0.03
PFN1-203ENST00000574872 PEX11AO75192 247 aa15.25■□□□□ 0.03
PFN1-203ENST00000574872 MYO1DO94832 1006 aa15.25■□□□□ 0.03
PFN1-203ENST00000574872 ITGB2P05107 769 aa15.25■□□□□ 0.03
PFN1-203ENST00000574872 CELA2AP08217 269 aa15.25■□□□□ 0.03
PFN1-203ENST00000574872 IL3P08700 152 aa15.25■□□□□ 0.03
PFN1-203ENST00000574872 ANXA4P09525 319 aaPredicted RBP15.25■□□□□ 0.03
PFN1-203ENST00000574872 PRPH2P23942 346 aa15.25■□□□□ 0.03
PFN1-203ENST00000574872 ALDH9A1P49189 494 aa15.25■□□□□ 0.03
PFN1-203ENST00000574872 CCL11P51671 97 aa15.25■□□□□ 0.03
PFN1-203ENST00000574872 RRADP55042 308 aa15.25■□□□□ 0.03
PFN1-203ENST00000574872 ACTN3Q08043 901 aaPredicted RBP15.25■□□□□ 0.03
PFN1-203ENST00000574872 STX4Q12846 297 aa15.25■□□□□ 0.03
PFN1-203ENST00000574872 RAPSNQ13702 412 aa15.25■□□□□ 0.03
PFN1-203ENST00000574872 NOXRED1Q6NXP6 359 aa15.25■□□□□ 0.03
PFN1-203ENST00000574872 GALNT18Q6P9A2 607 aa15.25■□□□□ 0.03
PFN1-203ENST00000574872 NDUFAF7Q7L592 441 aa15.25■□□□□ 0.03
PFN1-203ENST00000574872 PARP9Q8IXQ6 854 aa15.25■□□□□ 0.03
PFN1-203ENST00000574872 TMEM102Q8N9M5 508 aaPredicted RBP15.25■□□□□ 0.03
PFN1-203ENST00000574872 CLEC1AQ8NC01 280 aa15.25■□□□□ 0.03
PFN1-203ENST00000574872 C16orf78Q8WTQ4 265 aa15.25■□□□□ 0.03
PFN1-203ENST00000574872 ANKRD9Q96BM1 317 aaPredicted RBP15.25■□□□□ 0.03
PFN1-203ENST00000574872 C11orf24Q96F05 449 aaPredicted RBP15.25■□□□□ 0.03
PFN1-203ENST00000574872 NUF2Q9BZD4 464 aa15.25■□□□□ 0.03
PFN1-203ENST00000574872 ZNF700Q9H0M5 742 aa15.25■□□□□ 0.03
PFN1-203ENST00000574872 PNO1Q9NRX1 252 aaKnown RBP15.25■□□□□ 0.03
PFN1-203ENST00000574872 DLGAP4Q9Y2H0 992 aa15.25■□□□□ 0.03
PFN1-203ENST00000574872 KMT2BQ9UMN6 2715 aaPredicted RBP15.25■□□□□ 0.03
PFN1-203ENST00000574872 BLACEA4D250 179 aa15.24■□□□□ 0.03
PFN1-203ENST00000574872 PCDH17O14917 1159 aa15.24■□□□□ 0.03
PFN1-203ENST00000574872 GUCY1B2O75343 617 aa15.24■□□□□ 0.03
PFN1-203ENST00000574872 HPP00738 406 aa15.24■□□□□ 0.03
PFN1-203ENST00000574872 IFNA16P05015 189 aa15.24■□□□□ 0.03
PFN1-203ENST00000574872 FAM87AP0C7U9 286 aa15.24■□□□□ 0.03
PFN1-203ENST00000574872 POLE2P56282 527 aa15.24■□□□□ 0.03
PFN1-203ENST00000574872 TRA2BP62995 288 aaKnown RBP15.24■□□□□ 0.03
PFN1-203ENST00000574872 RHDQ02161 417 aa15.24■□□□□ 0.03
PFN1-203ENST00000574872 FOLH1Q04609 750 aa15.24■□□□□ 0.03
PFN1-203ENST00000574872 KIAA0040Q15053 153 aa15.24■□□□□ 0.03
PFN1-203ENST00000574872 LINC00303Q3SY05 128 aa15.24■□□□□ 0.03
PFN1-203ENST00000574872 ATP6AP1LQ52LC2 224 aa15.24■□□□□ 0.03
PFN1-203ENST00000574872 RFTN2Q52LD8 501 aaPredicted RBP15.24■□□□□ 0.03
PFN1-203ENST00000574872 OR52E8Q6IFG1 317 aa15.24■□□□□ 0.03
PFN1-203ENST00000574872 PAPD4Q6PIY7 484 aaKnown RBP15.24■□□□□ 0.03
PFN1-203ENST00000574872 HOMEZQ8IX15 550 aa15.24■□□□□ 0.03
PFN1-203ENST00000574872 KIRREL3Q8IZU9 778 aa15.24■□□□□ 0.03
PFN1-203ENST00000574872 CKAP2Q8WWK9 683 aa15.24■□□□□ 0.03
PFN1-203ENST00000574872 TTC9Q92623 222 aa15.24■□□□□ 0.03
PFN1-203ENST00000574872 TANKQ92844 425 aa15.24■□□□□ 0.03
PFN1-203ENST00000574872 TUBGCP3Q96CW5 907 aa15.24■□□□□ 0.03
PFN1-203ENST00000574872 PPP3R2Q96LZ3 170 aa15.24■□□□□ 0.03
PFN1-203ENST00000574872 WDR77Q9BQA1 342 aaPredicted RBP15.24■□□□□ 0.03
PFN1-203ENST00000574872 ARHGAP9Q9BRR9 750 aa15.24■□□□□ 0.03
PFN1-203ENST00000574872 C1orf50Q9BV19 199 aa15.24■□□□□ 0.03
PFN1-203ENST00000574872 ALOXE3Q9BYJ1 711 aa15.24■□□□□ 0.03
PFN1-203ENST00000574872 SLCO1B3Q9NPD5 702 aa15.24■□□□□ 0.03
PFN1-203ENST00000574872 ATP13A2Q9NQ11 1180 aa15.24■□□□□ 0.03
PFN1-203ENST00000574872 RIC8BQ9NVN3 520 aa15.24■□□□□ 0.03
PFN1-203ENST00000574872 SIRT5Q9NXA8 310 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms