RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 LIX1Q8N485 282 aa16.07■□□□□ 0.16
NUP88-210ENST00000574867 CDC26Q8NHZ8 85 aa16.07■□□□□ 0.16
NUP88-210ENST00000574867 STARD8Q92502 1023 aa16.07■□□□□ 0.16
NUP88-210ENST00000574867 OR52B2Q96RD2 323 aa16.07■□□□□ 0.16
NUP88-210ENST00000574867 DCTN4Q9UJW0 460 aa16.07■□□□□ 0.16
NUP88-210ENST00000574867 SSUH2Q9Y2M2 353 aa16.07■□□□□ 0.16
NUP88-210ENST00000574867 FREM2Q5SZK8 3169 aa16.07■□□□□ 0.16
NUP88-210ENST00000574867 ACACAQ13085 2346 aa16.07■□□□□ 0.16
NUP88-210ENST00000574867 CREG1O75629 220 aa16.07■□□□□ 0.16
NUP88-210ENST00000574867 TACR1P25103 407 aa16.07■□□□□ 0.16
NUP88-210ENST00000574867 HNRNPFP52597 415 aaKnown RBP16.07■□□□□ 0.16
NUP88-210ENST00000574867 MC1RQ01726 317 aa16.07■□□□□ 0.16
NUP88-210ENST00000574867 SLC13A2Q13183 592 aa16.07■□□□□ 0.16
NUP88-210ENST00000574867 SSPNQ14714 243 aa16.07■□□□□ 0.16
NUP88-210ENST00000574867 CGB2Q6NT52 195 aa16.07■□□□□ 0.16
NUP88-210ENST00000574867 LRRC69Q6ZNQ3 347 aa16.07■□□□□ 0.16
NUP88-210ENST00000574867 LAPTM4BQ86VI4 370 aa16.07■□□□□ 0.16
NUP88-210ENST00000574867 SPACA3Q8IXA5 215 aa16.07■□□□□ 0.16
NUP88-210ENST00000574867 TMEM52Q8NDY8 209 aa16.07■□□□□ 0.16
NUP88-210ENST00000574867 PLPP5Q8NEB5 264 aa16.07■□□□□ 0.16
NUP88-210ENST00000574867 RFWD2Q8NHY2 731 aa16.07■□□□□ 0.16
NUP88-210ENST00000574867 THOC1Q96FV9 657 aaKnown RBP16.07■□□□□ 0.16
NUP88-210ENST00000574867 EBF4Q9BQW3 602 aa16.07■□□□□ 0.16
NUP88-210ENST00000574867 EHD3Q9NZN3 535 aa16.07■□□□□ 0.16
NUP88-210ENST00000574867 KLHL14Q9P2G3 628 aa16.07■□□□□ 0.16
NUP88-210ENST00000574867 A0A0G2JND7 137 aa16.06■□□□□ 0.16
NUP88-210ENST00000574867 GMNCA6NCL1 334 aa16.06■□□□□ 0.16
NUP88-210ENST00000574867 CTNSO60931 367 aa16.06■□□□□ 0.16
NUP88-210ENST00000574867 MMP11P24347 488 aa16.06■□□□□ 0.16
NUP88-210ENST00000574867 LSM12Q3MHD2 195 aaKnown RBP16.06■□□□□ 0.16
NUP88-210ENST00000574867 CRTC2Q53ET0 693 aaPredicted RBP16.06■□□□□ 0.16
NUP88-210ENST00000574867 BROXQ5VW32 411 aa16.06■□□□□ 0.16
NUP88-210ENST00000574867 FAM71E1Q6IPT2 247 aa16.06■□□□□ 0.16
NUP88-210ENST00000574867 RAB43Q86YS6 212 aa16.06■□□□□ 0.16
NUP88-210ENST00000574867 METTL21AQ8WXB1 218 aa16.06■□□□□ 0.16
NUP88-210ENST00000574867 TSSK3Q96PN8 268 aa16.06■□□□□ 0.16
NUP88-210ENST00000574867 MAPRE3Q9UPY8 281 aa16.06■□□□□ 0.16
NUP88-210ENST00000574867 RAXQ9Y2V3 346 aa16.06■□□□□ 0.16
NUP88-210ENST00000574867 MRPS18BQ9Y676 258 aaKnown RBP16.06■□□□□ 0.16
NUP88-210ENST00000574867 CCDC88CQ9P219 2028 aa16.06■□□□□ 0.16
NUP88-210ENST00000574867 IGKV3D-11A0A0A0MRZ8 115 aa16.06■□□□□ 0.16
NUP88-210ENST00000574867 ALOX12BO75342 701 aa16.06■□□□□ 0.16
NUP88-210ENST00000574867 PRKRAO75569 313 aaKnown RBP16.06■□□□□ 0.16
NUP88-210ENST00000574867 C8orf89P0DMQ9 161 aa16.06■□□□□ 0.16
NUP88-210ENST00000574867 IDO1P14902 403 aa16.06■□□□□ 0.16
NUP88-210ENST00000574867 DDCP20711 480 aa16.06■□□□□ 0.16
NUP88-210ENST00000574867 RPL3P39023 403 aaKnown RBP16.06■□□□□ 0.16
NUP88-210ENST00000574867 DIO3P55073 304 aa16.06■□□□□ 0.16
NUP88-210ENST00000574867 FOXL2P58012 376 aa16.06■□□□□ 0.16
NUP88-210ENST00000574867 SLC48A1Q6P1K1 146 aa16.06■□□□□ 0.16
NUP88-210ENST00000574867 CLNKQ7Z7G1 428 aa16.06■□□□□ 0.16
NUP88-210ENST00000574867 KDF1Q8NAX2 398 aaPredicted RBP16.06■□□□□ 0.16
NUP88-210ENST00000574867 ZNF764Q96H86 408 aaPredicted RBP16.06■□□□□ 0.16
NUP88-210ENST00000574867 VPS50Q96JG6 964 aa16.06■□□□□ 0.16
NUP88-210ENST00000574867 PTCHD1Q96NR3 888 aa16.06■□□□□ 0.16
NUP88-210ENST00000574867 DCBLD2Q96PD2 775 aa16.06■□□□□ 0.16
NUP88-210ENST00000574867 KCNK13Q9HB14 408 aa16.06■□□□□ 0.16
NUP88-210ENST00000574867 MIEF1Q9NQG6 463 aa16.06■□□□□ 0.16
NUP88-210ENST00000574867 AIG1Q9NVV5 245 aa16.06■□□□□ 0.16
NUP88-210ENST00000574867 C19orf25Q9UFG5 118 aaPredicted RBP16.06■□□□□ 0.16
NUP88-210ENST00000574867 PSME2Q9UL46 239 aa16.06■□□□□ 0.16
NUP88-210ENST00000574867 ASPMQ8IZT6 3477 aa16.05■□□□□ 0.16
NUP88-210ENST00000574867 SRRM3A6NNA2 597 aaPredicted RBP16.05■□□□□ 0.16
NUP88-210ENST00000574867 ZNF891A8MT65 544 aaPredicted RBP16.05■□□□□ 0.16
NUP88-210ENST00000574867 UBDO15205 165 aa16.05■□□□□ 0.16
NUP88-210ENST00000574867 ALDOCP09972 364 aaKnown RBP16.05■□□□□ 0.16
NUP88-210ENST00000574867 G6PDP11413 515 aa16.05■□□□□ 0.16
NUP88-210ENST00000574867 DDX5P17844 614 aaKnown RBP16.05■□□□□ 0.16
NUP88-210ENST00000574867 MAOAP21397 527 aa16.05■□□□□ 0.16
NUP88-210ENST00000574867 HPCAL1P37235 193 aa16.05■□□□□ 0.16
NUP88-210ENST00000574867 ALDH9A1P49189 494 aa16.05■□□□□ 0.16
NUP88-210ENST00000574867 SEC24CP53992 1094 aa16.05■□□□□ 0.16
NUP88-210ENST00000574867 UCNP55089 124 aa16.05■□□□□ 0.16
NUP88-210ENST00000574867 IRX1P78414 480 aaPredicted RBP16.05■□□□□ 0.16
NUP88-210ENST00000574867 BTG2P78543 158 aa16.05■□□□□ 0.16
NUP88-210ENST00000574867 C2orf80Q0P641 193 aa16.05■□□□□ 0.16
NUP88-210ENST00000574867 BIKQ13323 160 aa16.05■□□□□ 0.16
NUP88-210ENST00000574867 SERTAD2Q14140 314 aa16.05■□□□□ 0.16
NUP88-210ENST00000574867 PTGR1Q14914 329 aa16.05■□□□□ 0.16
NUP88-210ENST00000574867 NSDHLQ15738 373 aa16.05■□□□□ 0.16
NUP88-210ENST00000574867 UGT8Q16880 541 aa16.05■□□□□ 0.16
NUP88-210ENST00000574867 FAM69BQ5VUD6 431 aa16.05■□□□□ 0.16
NUP88-210ENST00000574867 DNAJB14Q8TBM8 379 aa16.05■□□□□ 0.16
NUP88-210ENST00000574867 EGLN2Q96KS0 407 aa16.05■□□□□ 0.16
NUP88-210ENST00000574867 IP6K3Q96PC2 410 aa16.05■□□□□ 0.16
NUP88-210ENST00000574867 TMEM120AQ9BXJ8 343 aa16.05■□□□□ 0.16
NUP88-210ENST00000574867 HEY2Q9UBP5 337 aa16.05■□□□□ 0.16
NUP88-210ENST00000574867 BAIAP2L1Q9UHR4 511 aa16.05■□□□□ 0.16
NUP88-210ENST00000574867 ADAM21Q9UKJ8 722 aa16.05■□□□□ 0.16
NUP88-210ENST00000574867 IGF2RP11717 2491 aa16.05■□□□□ 0.16
NUP88-210ENST00000574867 GLOD5A6NK44 160 aa16.04■□□□□ 0.16
NUP88-210ENST00000574867 EFNA3P52797 238 aa16.04■□□□□ 0.16
NUP88-210ENST00000574867 ARFIP2P53365 341 aa16.04■□□□□ 0.16
NUP88-210ENST00000574867 STX4Q12846 297 aa16.04■□□□□ 0.16
NUP88-210ENST00000574867 IL10RAQ13651 578 aa16.04■□□□□ 0.16
NUP88-210ENST00000574867 GSTA3Q16772 222 aa16.04■□□□□ 0.16
NUP88-210ENST00000574867 TMEM205Q6UW68 189 aa16.04■□□□□ 0.16
NUP88-210ENST00000574867 R3HCC1LQ7Z5L2 792 aaKnown RBP16.04■□□□□ 0.16
NUP88-210ENST00000574867 MTERF4Q7Z6M4 381 aaKnown RBP16.04■□□□□ 0.16
NUP88-210ENST00000574867 ZSCAN1Q8NBB4 408 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms