RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 DNAJC13O75165 2243 aa16.2■□□□□ 0.18
SMG6-214ENST00000573827 OTOGQ6ZRI0 2925 aa16.19■□□□□ 0.18
SMG6-214ENST00000573827 CSMD2Q7Z408 3487 aa16.19■□□□□ 0.18
SMG6-214ENST00000573827 A0A0A6YYD5 115 aa16.19■□□□□ 0.18
SMG6-214ENST00000573827 A0A1B0GTL3 188 aa16.19■□□□□ 0.18
SMG6-214ENST00000573827 SYNDIG1LA6NDD5 238 aa16.19■□□□□ 0.18
SMG6-214ENST00000573827 NPIPA5E9PKD4 350 aa16.19■□□□□ 0.18
SMG6-214ENST00000573827 TMPRSS11DO60235 418 aa16.19■□□□□ 0.18
SMG6-214ENST00000573827 SLC19A2O60779 497 aa16.19■□□□□ 0.18
SMG6-214ENST00000573827 EEDO75530 441 aaKnown RBP16.19■□□□□ 0.18
SMG6-214ENST00000573827 ZFAND5O76080 213 aa16.19■□□□□ 0.18
SMG6-214ENST00000573827 IGKV3-11P04433 115 aa16.19■□□□□ 0.18
SMG6-214ENST00000573827 SSR2P43308 183 aa16.19■□□□□ 0.18
SMG6-214ENST00000573827 SERPINB9P50453 376 aa16.19■□□□□ 0.18
SMG6-214ENST00000573827 ALDH6A1Q02252 535 aaKnown RBP16.19■□□□□ 0.18
SMG6-214ENST00000573827 TRAF3Q13114 568 aa16.19■□□□□ 0.18
SMG6-214ENST00000573827 DDX39BQ13838 428 aaKnown RBP16.19■□□□□ 0.18
SMG6-214ENST00000573827 C3AR1Q16581 482 aa16.19■□□□□ 0.18
SMG6-214ENST00000573827 MAPKAPK3Q16644 382 aa16.19■□□□□ 0.18
SMG6-214ENST00000573827 KRTCAP3Q53RY4 240 aa16.19■□□□□ 0.18
SMG6-214ENST00000573827 DGAT2L6Q6ZPD8 337 aa16.19■□□□□ 0.18
SMG6-214ENST00000573827 NSUN5Q96P11 429 aaKnown RBP16.19■□□□□ 0.18
SMG6-214ENST00000573827 ACTR8Q9H981 624 aa16.19■□□□□ 0.18
SMG6-214ENST00000573827 LIN28AQ9H9Z2 209 aaKnown RBP16.19■□□□□ 0.18
SMG6-214ENST00000573827 DEPPQ9NTK1 212 aa16.19■□□□□ 0.18
SMG6-214ENST00000573827 CPSF2Q9P2I0 782 aaKnown RBP16.19■□□□□ 0.18
SMG6-214ENST00000573827 MYOTQ9UBF9 498 aa16.19■□□□□ 0.18
SMG6-214ENST00000573827 XPR1Q9UBH6 696 aa16.19■□□□□ 0.18
SMG6-214ENST00000573827 PCTPQ9UKL6 214 aa16.19■□□□□ 0.18
SMG6-214ENST00000573827 NPIPA1Q9UND3 350 aa16.19■□□□□ 0.18
SMG6-214ENST00000573827 ASB4Q9Y574 426 aa16.19■□□□□ 0.18
SMG6-214ENST00000573827 PCDHGA11Q9Y5H2 935 aa16.19■□□□□ 0.18
SMG6-214ENST00000573827 TNPO3Q9Y5L0 923 aaKnown RBP16.19■□□□□ 0.18
SMG6-214ENST00000573827 CACNA1CQ13936 2221 aa16.19■□□□□ 0.18
SMG6-214ENST00000573827 PDZD2O15018 2839 aa16.18■□□□□ 0.18
SMG6-214ENST00000573827 TRGV8A0A0C4DH27 118 aa16.18■□□□□ 0.18
SMG6-214ENST00000573827 WASHC1A8K0Z3 465 aa16.18■□□□□ 0.18
SMG6-214ENST00000573827 STX16-NPEPL1H3BU86 382 aa16.18■□□□□ 0.18
SMG6-214ENST00000573827 FCHO1O14526 889 aa16.18■□□□□ 0.18
SMG6-214ENST00000573827 STX16O14662 325 aa16.18■□□□□ 0.18
SMG6-214ENST00000573827 ZNHIT1O43257 154 aa16.18■□□□□ 0.18
SMG6-214ENST00000573827 PRKRAO75569 313 aaKnown RBP16.18■□□□□ 0.18
SMG6-214ENST00000573827 OR2J2O76002 312 aa16.18■□□□□ 0.18
SMG6-214ENST00000573827 TUBB4AP04350 444 aa16.18■□□□□ 0.18
SMG6-214ENST00000573827 INHBAP08476 426 aa16.18■□□□□ 0.18
SMG6-214ENST00000573827 COL6A2P12110 1019 aa16.18■□□□□ 0.18
SMG6-214ENST00000573827 NEK2P51955 445 aa16.18■□□□□ 0.18
SMG6-214ENST00000573827 SLAMF1Q13291 335 aa16.18■□□□□ 0.18
SMG6-214ENST00000573827 CUL3Q13618 768 aa16.18■□□□□ 0.18
SMG6-214ENST00000573827 SERTAD2Q14140 314 aa16.18■□□□□ 0.18
SMG6-214ENST00000573827 CPSF6Q16630 551 aaKnown RBP eCLIP16.18■□□□□ 0.18
SMG6-214ENST00000573827 C18orf63Q68DL7 685 aa16.18■□□□□ 0.18
SMG6-214ENST00000573827 KLC3Q6P597 504 aa16.18■□□□□ 0.18
SMG6-214ENST00000573827 SULF2Q8IWU5 870 aa16.18■□□□□ 0.18
SMG6-214ENST00000573827 OR4N5Q8IXE1 308 aa16.18■□□□□ 0.18
SMG6-214ENST00000573827 ZFP62Q8NB50 900 aaPredicted RBP16.18■□□□□ 0.18
SMG6-214ENST00000573827 OR8K3Q8NH51 312 aa16.18■□□□□ 0.18
SMG6-214ENST00000573827 UHMK1Q8TAS1 419 aaKnown RBP16.18■□□□□ 0.18
SMG6-214ENST00000573827 SLC2A12Q8TD20 617 aa16.18■□□□□ 0.18
SMG6-214ENST00000573827 ZNF721Q8TF20 911 aa16.18■□□□□ 0.18
SMG6-214ENST00000573827 DAZLQ92904 295 aaKnown RBP16.18■□□□□ 0.18
SMG6-214ENST00000573827 RGMAQ96B86 450 aa16.18■□□□□ 0.18
SMG6-214ENST00000573827 CDK15Q96Q40 435 aa16.18■□□□□ 0.18
SMG6-214ENST00000573827 TXLNGYQ9BZA5 131 aa16.18■□□□□ 0.18
SMG6-214ENST00000573827 EPB41L4BQ9H329 900 aa16.18■□□□□ 0.18
SMG6-214ENST00000573827 NOL11Q9H8H0 719 aaKnown RBP16.18■□□□□ 0.18
SMG6-214ENST00000573827 DDX31Q9H8H2 851 aaKnown RBP16.18■□□□□ 0.18
SMG6-214ENST00000573827 YARS2Q9Y2Z4 477 aaKnown RBP16.18■□□□□ 0.18
SMG6-214ENST00000573827 CLCA3PQ9Y6N3 262 aa16.18■□□□□ 0.18
SMG6-214ENST00000573827 C17orf105B2RV13 164 aa16.17■□□□□ 0.18
SMG6-214ENST00000573827 TRIM49D1C9J1S8 452 aa16.17■□□□□ 0.18
SMG6-214ENST00000573827 HRKO00198 91 aa16.17■□□□□ 0.18
SMG6-214ENST00000573827 FOXE1O00358 373 aaPredicted RBP16.17■□□□□ 0.18
SMG6-214ENST00000573827 PROM1O43490 865 aa16.17■□□□□ 0.18
SMG6-214ENST00000573827 ASNA1O43681 348 aa16.17■□□□□ 0.18
SMG6-214ENST00000573827 OR6B1O95007 311 aa16.17■□□□□ 0.18
SMG6-214ENST00000573827 IFNA16P05015 189 aa16.17■□□□□ 0.18
SMG6-214ENST00000573827 RPS17P08708 135 aaKnown RBP16.17■□□□□ 0.18
SMG6-214ENST00000573827 ABHD2P08910 425 aa16.17■□□□□ 0.18
SMG6-214ENST00000573827 RBP1P09455 135 aa16.17■□□□□ 0.18
SMG6-214ENST00000573827 ZNF24P17028 368 aa16.17■□□□□ 0.18
SMG6-214ENST00000573827 CPN2P22792 545 aa16.17■□□□□ 0.18
SMG6-214ENST00000573827 PTX3P26022 381 aaPredicted RBP16.17■□□□□ 0.18
SMG6-214ENST00000573827 STT3AP46977 705 aa16.17■□□□□ 0.18
SMG6-214ENST00000573827 PIK3CGP48736 1102 aa16.17■□□□□ 0.18
SMG6-214ENST00000573827 HK2P52789 917 aa16.17■□□□□ 0.18
SMG6-214ENST00000573827 ADORA2A-AS1P86434 159 aa16.17■□□□□ 0.18
SMG6-214ENST00000573827 HSF1Q00613 529 aa16.17■□□□□ 0.18
SMG6-214ENST00000573827 TNFRSF17Q02223 184 aa16.17■□□□□ 0.18
SMG6-214ENST00000573827 STX4Q12846 297 aa16.17■□□□□ 0.18
SMG6-214ENST00000573827 FAM219BQ5XKK7 198 aa16.17■□□□□ 0.18
SMG6-214ENST00000573827 HSDL2Q6YN16 418 aa16.17■□□□□ 0.18
SMG6-214ENST00000573827 GPR180Q86V85 440 aa16.17■□□□□ 0.18
SMG6-214ENST00000573827 MYLK4Q86YV6 388 aaPredicted RBP16.17■□□□□ 0.18
SMG6-214ENST00000573827 SPPL2CQ8IUH8 684 aa16.17■□□□□ 0.18
SMG6-214ENST00000573827 CYP4Z2PQ8N1L4 340 aa16.17■□□□□ 0.18
SMG6-214ENST00000573827 C16orf52Q8NHV5 167 aa16.17■□□□□ 0.18
SMG6-214ENST00000573827 PHF21BQ96EK2 531 aa16.17■□□□□ 0.18
SMG6-214ENST00000573827 RASL10BQ96S79 203 aa16.17■□□□□ 0.18
SMG6-214ENST00000573827 NTMT1Q9BV86 223 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms