RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 PAQR3Q6TCH7 311 aa11.22□□□□□ -0.61
PRPF8-208ENST00000573716 RAD9BQ6WBX8 426 aa11.22□□□□□ -0.61
PRPF8-208ENST00000573716 YTHDF3Q7Z739 585 aaKnown RBP11.22□□□□□ -0.61
PRPF8-208ENST00000573716 ZNF595Q8IYB9 648 aa11.22□□□□□ -0.61
PRPF8-208ENST00000573716 MORN4Q8NDC4 146 aa11.22□□□□□ -0.61
PRPF8-208ENST00000573716 FAM13CQ8NE31 585 aa11.22□□□□□ -0.61
PRPF8-208ENST00000573716 OR14A16Q8NHC5 309 aa11.22□□□□□ -0.61
PRPF8-208ENST00000573716 SLC2A12Q8TD20 617 aa11.22□□□□□ -0.61
PRPF8-208ENST00000573716 PTPMT1Q8WUK0 201 aaPredicted RBP11.22□□□□□ -0.61
PRPF8-208ENST00000573716 GAL3ST3Q96A11 431 aa11.22□□□□□ -0.61
PRPF8-208ENST00000573716 HSPBAP1Q96EW2 488 aa11.22□□□□□ -0.61
PRPF8-208ENST00000573716 PERPQ96FX8 193 aa11.22□□□□□ -0.61
PRPF8-208ENST00000573716 TRIB1Q96RU8 372 aa11.22□□□□□ -0.61
PRPF8-208ENST00000573716 ALOXE3Q9BYJ1 711 aa11.22□□□□□ -0.61
PRPF8-208ENST00000573716 TRIM5Q9C035 493 aa11.22□□□□□ -0.61
PRPF8-208ENST00000573716 PRM3Q9NNZ6 103 aa11.22□□□□□ -0.61
PRPF8-208ENST00000573716 ZFP64Q9NPA5 681 aa11.22□□□□□ -0.61
PRPF8-208ENST00000573716 COPS7AQ9UBW8 275 aa11.22□□□□□ -0.61
PRPF8-208ENST00000573716 TRPS1Q9UHF7 1281 aa11.22□□□□□ -0.61
PRPF8-208ENST00000573716 EIF3LQ9Y262 564 aaKnown RBP11.22□□□□□ -0.61
PRPF8-208ENST00000573716 ZANQ9Y493 2812 aa11.22□□□□□ -0.61
PRPF8-208ENST00000573716 CLDN16Q9Y5I7 305 aa11.22□□□□□ -0.61
PRPF8-208ENST00000573716 MAD1L1Q9Y6D9 718 aa11.22□□□□□ -0.61
PRPF8-208ENST00000573716 RNF212BA8MTL3 300 aa11.21□□□□□ -0.61
PRPF8-208ENST00000573716 AHRRA9YTQ3 701 aa11.21□□□□□ -0.61
PRPF8-208ENST00000573716 GOLGA8MH3BSY2 632 aa11.21□□□□□ -0.61
PRPF8-208ENST00000573716 CASKO14936 926 aa11.21□□□□□ -0.61
PRPF8-208ENST00000573716 TRAPPC6AO75865 159 aa11.21□□□□□ -0.61
PRPF8-208ENST00000573716 HNRNPH1P31943 449 aaKnown RBP11.21□□□□□ -0.61
PRPF8-208ENST00000573716 TIMP3P35625 211 aa11.21□□□□□ -0.61
PRPF8-208ENST00000573716 KCNJ1P48048 391 aa11.21□□□□□ -0.61
PRPF8-208ENST00000573716 CPA2P48052 419 aa11.21□□□□□ -0.61
PRPF8-208ENST00000573716 PLA2G16P53816 162 aa11.21□□□□□ -0.61
PRPF8-208ENST00000573716 SORDQ00796 357 aa11.21□□□□□ -0.61
PRPF8-208ENST00000573716 ID2Q02363 134 aa11.21□□□□□ -0.61
PRPF8-208ENST00000573716 KIF5AQ12840 1032 aa11.21□□□□□ -0.61
PRPF8-208ENST00000573716 POMZP3Q6PJE2 187 aa11.21□□□□□ -0.61
PRPF8-208ENST00000573716 NXPE4Q6UWF7 544 aa11.21□□□□□ -0.61
PRPF8-208ENST00000573716 THOC6Q86W42 341 aaKnown RBP11.21□□□□□ -0.61
PRPF8-208ENST00000573716 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.21□□□□□ -0.61
PRPF8-208ENST00000573716 CALML6Q8TD86 181 aa11.21□□□□□ -0.61
PRPF8-208ENST00000573716 ATL1Q8WXF7 558 aa11.21□□□□□ -0.61
PRPF8-208ENST00000573716 FBXL8Q96CD0 374 aa11.21□□□□□ -0.61
PRPF8-208ENST00000573716 CSF3RQ99062 836 aa11.21□□□□□ -0.61
PRPF8-208ENST00000573716 NPLQ9BXD5 320 aaPredicted RBP11.21□□□□□ -0.61
PRPF8-208ENST00000573716 COPS7BQ9H9Q2 264 aaPredicted RBP11.21□□□□□ -0.61
PRPF8-208ENST00000573716 PELI2Q9HAT8 420 aa11.21□□□□□ -0.61
PRPF8-208ENST00000573716 IARS2Q9NSE4 1012 aaKnown RBP11.21□□□□□ -0.61
PRPF8-208ENST00000573716 TAS2R13Q9NYV9 303 aa11.21□□□□□ -0.61
PRPF8-208ENST00000573716 CAPN6Q9Y6Q1 641 aa11.21□□□□□ -0.61
PRPF8-208ENST00000573716 DOCK7Q96N67 2140 aa11.2□□□□□ -0.62
PRPF8-208ENST00000573716 A0A088AWK7 358 aa11.2□□□□□ -0.62
PRPF8-208ENST00000573716 SH3D21A4FU49 640 aa11.2□□□□□ -0.62
PRPF8-208ENST00000573716 LRRC3CA6NJW4 275 aa11.2□□□□□ -0.62
PRPF8-208ENST00000573716 SDR42E2A6NKP2 422 aa11.2□□□□□ -0.62
PRPF8-208ENST00000573716 LDB3O75112 727 aa11.2□□□□□ -0.62
PRPF8-208ENST00000573716 GOSR1O95249 250 aa11.2□□□□□ -0.62
PRPF8-208ENST00000573716 ZNF10P21506 573 aaPredicted RBP11.2□□□□□ -0.62
PRPF8-208ENST00000573716 CTSSP25774 331 aa11.2□□□□□ -0.62
PRPF8-208ENST00000573716 CERS1P27544 350 aa11.2□□□□□ -0.62
PRPF8-208ENST00000573716 PGGT1BP53609 377 aa11.2□□□□□ -0.62
PRPF8-208ENST00000573716 CDKN2DP55273 166 aa11.2□□□□□ -0.62
PRPF8-208ENST00000573716 AP1S2P56377 157 aa11.2□□□□□ -0.62
PRPF8-208ENST00000573716 DUSP8Q13202 625 aa11.2□□□□□ -0.62
PRPF8-208ENST00000573716 TOMM20Q15388 145 aa11.2□□□□□ -0.62
PRPF8-208ENST00000573716 CCNG2Q16589 344 aa11.2□□□□□ -0.62
PRPF8-208ENST00000573716 HSP90AA5PQ58FG0 334 aa11.2□□□□□ -0.62
PRPF8-208ENST00000573716 RBM20Q5T481 1227 aaKnown RBP11.2□□□□□ -0.62
PRPF8-208ENST00000573716 CAPN12Q6ZSI9 719 aa11.2□□□□□ -0.62
PRPF8-208ENST00000573716 LUZP2Q86TE4 346 aa11.2□□□□□ -0.62
PRPF8-208ENST00000573716 CAND1Q86VP6 1230 aaKnown RBP11.2□□□□□ -0.62
PRPF8-208ENST00000573716 KLHDC8AQ8IYD2 350 aa11.2□□□□□ -0.62
PRPF8-208ENST00000573716 RASGEF1CQ8N431 466 aa11.2□□□□□ -0.62
PRPF8-208ENST00000573716 GABPB2Q8TAK5 448 aaPredicted RBP11.2□□□□□ -0.62
PRPF8-208ENST00000573716 SLC22A8Q8TCC7 542 aa11.2□□□□□ -0.62
PRPF8-208ENST00000573716 WDR83Q9BRX9 315 aaKnown RBP11.2□□□□□ -0.62
PRPF8-208ENST00000573716 DESI2Q9BSY9 194 aa11.2□□□□□ -0.62
PRPF8-208ENST00000573716 RBM24Q9BX46 236 aaKnown RBP11.2□□□□□ -0.62
PRPF8-208ENST00000573716 TSPY26PQ9H489 355 aa11.2□□□□□ -0.62
PRPF8-208ENST00000573716 UBTD1Q9HAC8 227 aa11.2□□□□□ -0.62
PRPF8-208ENST00000573716 ACKR4Q9NPB9 350 aa11.2□□□□□ -0.62
PRPF8-208ENST00000573716 PCDHGB3Q9Y5G1 929 aa11.2□□□□□ -0.62
PRPF8-208ENST00000573716 MXRA5Q9NR99 2828 aa11.2□□□□□ -0.62
PRPF8-208ENST00000573716 NBEAL1Q6ZS30 2694 aa11.19□□□□□ -0.62
PRPF8-208ENST00000573716 ZCWPW2A0A1B0GU75 182 aa11.19□□□□□ -0.62
PRPF8-208ENST00000573716 MAGEB16A2A368 324 aa11.19□□□□□ -0.62
PRPF8-208ENST00000573716 CTNSO60931 367 aa11.19□□□□□ -0.62
PRPF8-208ENST00000573716 H2AFYO75367 372 aaKnown RBP11.19□□□□□ -0.62
PRPF8-208ENST00000573716 ERN1O75460 977 aaKnown RBP11.19□□□□□ -0.62
PRPF8-208ENST00000573716 ETHE1O95571 254 aa11.19□□□□□ -0.62
PRPF8-208ENST00000573716 BMP7P18075 431 aa11.19□□□□□ -0.62
PRPF8-208ENST00000573716 OPRM1P35372 400 aa11.19□□□□□ -0.62
PRPF8-208ENST00000573716 LIM2P55344 173 aa11.19□□□□□ -0.62
PRPF8-208ENST00000573716 IL2P60568 153 aa11.19□□□□□ -0.62
PRPF8-208ENST00000573716 TIAL1Q01085 375 aaKnown RBP eCLIP11.19□□□□□ -0.62
PRPF8-208ENST00000573716 CRYZQ08257 329 aaKnown RBP11.19□□□□□ -0.62
PRPF8-208ENST00000573716 GPS1Q13098 491 aa11.19□□□□□ -0.62
PRPF8-208ENST00000573716 RCN2Q14257 317 aa11.19□□□□□ -0.62
PRPF8-208ENST00000573716 SF3B4Q15427 424 aaKnown RBP eCLIP11.19□□□□□ -0.623e-33■■■■■ 51.3
PRPF8-208ENST00000573716 ZNF791Q3KP31 576 aaPredicted RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms