RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 GTF3C1Q12789 2109 aa16.79■□□□□ 0.28
CHD3-214ENST00000572579 C17orf105B2RV13 164 aa16.79■□□□□ 0.28
CHD3-214ENST00000572579 E9PLN8 166 aa16.79■□□□□ 0.28
CHD3-214ENST00000572579 G3V3Y1 287 aa16.79■□□□□ 0.28
CHD3-214ENST00000572579 KLRC4-KLRK1H3BQV0 150 aa16.79■□□□□ 0.28
CHD3-214ENST00000572579 KLK8O60259 260 aa16.79■□□□□ 0.28
CHD3-214ENST00000572579 MLYCDO95822 493 aa16.79■□□□□ 0.28
CHD3-214ENST00000572579 STX2P32856 288 aa16.79■□□□□ 0.28
CHD3-214ENST00000572579 RNF4P78317 190 aa16.79■□□□□ 0.28
CHD3-214ENST00000572579 IGLV3-21P80748 117 aaPredicted RBP16.79■□□□□ 0.28
CHD3-214ENST00000572579 STX4Q12846 297 aa16.79■□□□□ 0.28
CHD3-214ENST00000572579 SLAMF1Q13291 335 aa16.79■□□□□ 0.28
CHD3-214ENST00000572579 HIST2H2ACQ16777 129 aaPredicted RBP16.79■□□□□ 0.28
CHD3-214ENST00000572579 KHDRBS2Q5VWX1 349 aaKnown RBP16.79■□□□□ 0.28
CHD3-214ENST00000572579 C18orf63Q68DL7 685 aa16.79■□□□□ 0.28
CHD3-214ENST00000572579 HIST2H2AA3Q6FI13 130 aa16.79■□□□□ 0.28
CHD3-214ENST00000572579 GRHL2Q6ISB3 625 aa16.79■□□□□ 0.28
CHD3-214ENST00000572579 HSDL2Q6YN16 418 aa16.79■□□□□ 0.28
CHD3-214ENST00000572579 PLD6Q8N2A8 252 aaKnown RBP16.79■□□□□ 0.28
CHD3-214ENST00000572579 RPRMLQ8N4K4 120 aa16.79■□□□□ 0.28
CHD3-214ENST00000572579 TEX9Q8N6V9 391 aa16.79■□□□□ 0.28
CHD3-214ENST00000572579 POGLUT1Q8NBL1 392 aa16.79■□□□□ 0.28
CHD3-214ENST00000572579 ACBD4Q8NC06 268 aa16.79■□□□□ 0.28
CHD3-214ENST00000572579 PSD4Q8NDX1 1056 aa16.79■□□□□ 0.28
CHD3-214ENST00000572579 FAM57AQ8TBR7 257 aa16.79■□□□□ 0.28
CHD3-214ENST00000572579 PPWD1Q96BP3 646 aaKnown RBP16.79■□□□□ 0.28
CHD3-214ENST00000572579 SCYL1Q96KG9 808 aa16.79■□□□□ 0.28
CHD3-214ENST00000572579 VKORC1Q9BQB6 163 aa16.79■□□□□ 0.28
CHD3-214ENST00000572579 DEFB127Q9H1M4 99 aa16.79■□□□□ 0.28
CHD3-214ENST00000572579 COPS7BQ9H9Q2 264 aaPredicted RBP16.79■□□□□ 0.28
CHD3-214ENST00000572579 CHST11Q9NPF2 352 aa16.79■□□□□ 0.28
CHD3-214ENST00000572579 OPTCQ9UBM4 332 aa16.79■□□□□ 0.28
CHD3-214ENST00000572579 ACOT9Q9Y305 439 aa16.79■□□□□ 0.28
CHD3-214ENST00000572579 ATG4BQ9Y4P1 393 aa16.79■□□□□ 0.28
CHD3-214ENST00000572579 POLQO75417 2590 aa16.78■□□□□ 0.28
CHD3-214ENST00000572579 PLPP1O14494 284 aa16.78■□□□□ 0.28
CHD3-214ENST00000572579 TFECO14948 347 aaPredicted RBP16.78■□□□□ 0.28
CHD3-214ENST00000572579 EEDO75530 441 aaKnown RBP16.78■□□□□ 0.28
CHD3-214ENST00000572579 GLSO94925 669 aaPredicted RBP16.78■□□□□ 0.28
CHD3-214ENST00000572579 CLDN14O95500 239 aa16.78■□□□□ 0.28
CHD3-214ENST00000572579 ALDOAP04075 364 aaKnown RBP16.78■□□□□ 0.28
CHD3-214ENST00000572579 S100BP04271 92 aaPredicted RBP16.78■□□□□ 0.28
CHD3-214ENST00000572579 IGKV3-11P04433 115 aa16.78■□□□□ 0.28
CHD3-214ENST00000572579 PTGS2P35354 604 aa16.78■□□□□ 0.28
CHD3-214ENST00000572579 HNRNPH2P55795 449 aaKnown RBP16.78■□□□□ 0.28
CHD3-214ENST00000572579 TGM3Q08188 693 aa16.78■□□□□ 0.28
CHD3-214ENST00000572579 NAA30Q147X3 362 aaPredicted RBP16.78■□□□□ 0.28
CHD3-214ENST00000572579 SETDB1Q15047 1291 aa16.78■□□□□ 0.28
CHD3-214ENST00000572579 PFKFB4Q16877 469 aa16.78■□□□□ 0.28
CHD3-214ENST00000572579 FAM219BQ5XKK7 198 aa16.78■□□□□ 0.28
CHD3-214ENST00000572579 OR4C11Q6IEV9 310 aa16.78■□□□□ 0.28
CHD3-214ENST00000572579 LYPD8Q6UX82 237 aa16.78■□□□□ 0.28
CHD3-214ENST00000572579 TBC1D1Q86TI0 1168 aaPredicted RBP16.78■□□□□ 0.28
CHD3-214ENST00000572579 OR2M7Q8NG81 312 aa16.78■□□□□ 0.28
CHD3-214ENST00000572579 OR14A16Q8NHC5 309 aa16.78■□□□□ 0.28
CHD3-214ENST00000572579 RHEBL1Q8TAI7 183 aa16.78■□□□□ 0.28
CHD3-214ENST00000572579 PHF10Q8WUB8 498 aaKnown RBP16.78■□□□□ 0.28
CHD3-214ENST00000572579 DAZLQ92904 295 aaKnown RBP16.78■□□□□ 0.28
CHD3-214ENST00000572579 MTFMTQ96DP5 389 aaKnown RBP16.78■□□□□ 0.28
CHD3-214ENST00000572579 CMTM7Q96FZ5 175 aa16.78■□□□□ 0.28
CHD3-214ENST00000572579 MTERF1Q99551 399 aaKnown RBP16.78■□□□□ 0.28
CHD3-214ENST00000572579 CCDC77Q9BR77 488 aa16.78■□□□□ 0.28
CHD3-214ENST00000572579 RAB17Q9H0T7 212 aa16.78■□□□□ 0.28
CHD3-214ENST00000572579 SEMA4BQ9NPR2 832 aaPredicted RBP16.78■□□□□ 0.28
CHD3-214ENST00000572579 DMRT3Q9NQL9 472 aa16.78■□□□□ 0.28
CHD3-214ENST00000572579 SNX15Q9NRS6 342 aa16.78■□□□□ 0.28
CHD3-214ENST00000572579 ZNF358Q9NW07 568 aa16.78■□□□□ 0.28
CHD3-214ENST00000572579 A8MVJ9 347 aa16.77■□□□□ 0.28
CHD3-214ENST00000572579 TMPRSS11DO60235 418 aa16.77■□□□□ 0.28
CHD3-214ENST00000572579 CDC40O60508 579 aaKnown RBP eCLIP16.77■□□□□ 0.28
CHD3-214ENST00000572579 SIX3O95343 332 aaPredicted RBP16.77■□□□□ 0.28
CHD3-214ENST00000572579 CPN2P22792 545 aa16.77■□□□□ 0.28
CHD3-214ENST00000572579 HPDP32754 393 aaPredicted RBP16.77■□□□□ 0.28
CHD3-214ENST00000572579 NEK2P51955 445 aa16.77■□□□□ 0.28
CHD3-214ENST00000572579 SMSP52788 366 aa16.77■□□□□ 0.28
CHD3-214ENST00000572579 KRTAP10-9P60411 292 aa16.77■□□□□ 0.28
CHD3-214ENST00000572579 RPS13P62277 151 aaKnown RBP16.77■□□□□ 0.28
CHD3-214ENST00000572579 FOXO1Q12778 655 aa16.77■□□□□ 0.28
CHD3-214ENST00000572579 NAB1Q13506 487 aa16.77■□□□□ 0.28
CHD3-214ENST00000572579 AP5B1Q2VPB7 878 aa16.77■□□□□ 0.28
CHD3-214ENST00000572579 MRM1Q6IN84 353 aaKnown RBP16.77■□□□□ 0.28
CHD3-214ENST00000572579 ADGRD1Q6QNK2 874 aa16.77■□□□□ 0.28
CHD3-214ENST00000572579 CHSY3Q70JA7 882 aa16.77■□□□□ 0.28
CHD3-214ENST00000572579 CD163Q86VB7 1156 aa16.77■□□□□ 0.28
CHD3-214ENST00000572579 SRFBP1Q8NEF9 429 aaKnown RBP16.77■□□□□ 0.28
CHD3-214ENST00000572579 OR8K3Q8NH51 312 aa16.77■□□□□ 0.28
CHD3-214ENST00000572579 ASB15Q8WXK1 588 aa16.77■□□□□ 0.28
CHD3-214ENST00000572579 UBE2E3Q969T4 207 aa16.77■□□□□ 0.28
CHD3-214ENST00000572579 SENP5Q96HI0 755 aaPredicted RBP16.77■□□□□ 0.28
CHD3-214ENST00000572579 ROGDIQ9GZN7 287 aa16.77■□□□□ 0.28
CHD3-214ENST00000572579 ZDHHC11Q9H8X9 412 aa16.77■□□□□ 0.28
CHD3-214ENST00000572579 SH2D2AQ9NP31 389 aa16.77■□□□□ 0.28
CHD3-214ENST00000572579 TIMMDC1Q9NPL8 285 aa16.77■□□□□ 0.28
CHD3-214ENST00000572579 HPF1Q9NWY4 346 aa16.77■□□□□ 0.28
CHD3-214ENST00000572579 NINJ2Q9NZG7 142 aa16.77■□□□□ 0.28
CHD3-214ENST00000572579 ERVK-11Q9UQG0 969 aa16.77■□□□□ 0.28
CHD3-214ENST00000572579 TSC22D4Q9Y3Q8 395 aa16.77■□□□□ 0.28
CHD3-214ENST00000572579 ASB4Q9Y574 426 aa16.77■□□□□ 0.28
CHD3-214ENST00000572579 A0A087X1B8 175 aa16.76■□□□□ 0.27
CHD3-214ENST00000572579 A0A096LPK6 155 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms