RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 TAOK1Q7L7X3 1001 aa5.11□□□□□ -1.59
SF3B3-214ENST00000572365 PATL1Q86TB9 770 aaKnown RBP5.11□□□□□ -1.59
SF3B3-214ENST00000572365 UNC45BQ8IWX7 931 aa5.11□□□□□ -1.59
SF3B3-214ENST00000572365 ARHGAP18Q8N392 663 aa5.11□□□□□ -1.59
SF3B3-214ENST00000572365 PARP16Q8N5Y8 322 aa5.11□□□□□ -1.59
SF3B3-214ENST00000572365 ARFGAP1Q8N6T3 406 aa5.11□□□□□ -1.59
SF3B3-214ENST00000572365 GBP7Q8N8V2 638 aaPredicted RBP5.11□□□□□ -1.59
SF3B3-214ENST00000572365 DRAXINQ8NBI3 349 aaPredicted RBP5.11□□□□□ -1.59
SF3B3-214ENST00000572365 SLC4A11Q8NBS3 891 aa5.11□□□□□ -1.59
SF3B3-214ENST00000572365 FDCSPQ8NFU4 85 aa5.11□□□□□ -1.59
SF3B3-214ENST00000572365 OR1E3Q8WZA6 343 aa5.11□□□□□ -1.59
SF3B3-214ENST00000572365 SGCDQ92629 289 aa5.11□□□□□ -1.59
SF3B3-214ENST00000572365 ARHGEF26Q96DR7 871 aa5.11□□□□□ -1.59
SF3B3-214ENST00000572365 ALG14Q96F25 216 aa5.11□□□□□ -1.59
SF3B3-214ENST00000572365 PDXPQ96GD0 296 aa5.11□□□□□ -1.59
SF3B3-214ENST00000572365 SERINC2Q96SA4 455 aa5.11□□□□□ -1.59
SF3B3-214ENST00000572365 IQCGQ9H095 443 aaKnown RBP5.11□□□□□ -1.59
SF3B3-214ENST00000572365 ZDHHC6Q9H6R6 413 aa5.11□□□□□ -1.59
SF3B3-214ENST00000572365 AGPAT3Q9NRZ7 376 aa5.11□□□□□ -1.59
SF3B3-214ENST00000572365 TRNAU1APQ9NX07 287 aaKnown RBP5.11□□□□□ -1.59
SF3B3-214ENST00000572365 POLG2Q9UHN1 485 aa5.11□□□□□ -1.59
SF3B3-214ENST00000572365 APPL1Q9UKG1 709 aa5.11□□□□□ -1.59
SF3B3-214ENST00000572365 MTMR6Q9Y217 621 aa5.11□□□□□ -1.59
SF3B3-214ENST00000572365 TTLL3Q9Y4R7 772 aa5.11□□□□□ -1.59
SF3B3-214ENST00000572365 FLNAP21333 2647 aaKnown RBP5.11□□□□□ -1.59
SF3B3-214ENST00000572365 ATRQ13535 2644 aa5.11□□□□□ -1.59
SF3B3-214ENST00000572365 DOCK4Q8N1I0 1966 aa5.11□□□□□ -1.59
SF3B3-214ENST00000572365 A0A0D9SEW6 157 aa5.1□□□□□ -1.59
SF3B3-214ENST00000572365 TMEM272A0A1B0GTI8 110 aa5.1□□□□□ -1.59
SF3B3-214ENST00000572365 TMEM202A6NGA9 273 aa5.1□□□□□ -1.59
SF3B3-214ENST00000572365 A8MX80 341 aa5.1□□□□□ -1.59
SF3B3-214ENST00000572365 HCRTR2O43614 444 aa5.1□□□□□ -1.59
SF3B3-214ENST00000572365 TMCC2O75069 709 aa5.1□□□□□ -1.59
SF3B3-214ENST00000572365 ZNF821O75541 412 aaPredicted RBP5.1□□□□□ -1.59
SF3B3-214ENST00000572365 CREG1O75629 220 aa5.1□□□□□ -1.59
SF3B3-214ENST00000572365 NDUFB8O95169 186 aa5.1□□□□□ -1.59
SF3B3-214ENST00000572365 IGLV3-27P01718 113 aa5.1□□□□□ -1.59
SF3B3-214ENST00000572365 PCCBP05166 539 aa5.1□□□□□ -1.59
SF3B3-214ENST00000572365 FGF1P05230 155 aa5.1□□□□□ -1.59
SF3B3-214ENST00000572365 FYNP06241 537 aa5.1□□□□□ -1.59
SF3B3-214ENST00000572365 MMP2P08253 660 aa5.1□□□□□ -1.59
SF3B3-214ENST00000572365 FGF2P09038 288 aa5.1□□□□□ -1.59
SF3B3-214ENST00000572365 COX6B1P14854 86 aa5.1□□□□□ -1.59
SF3B3-214ENST00000572365 SCP2P22307 547 aa5.1□□□□□ -1.59
SF3B3-214ENST00000572365 MYF6P23409 242 aa5.1□□□□□ -1.59
SF3B3-214ENST00000572365 CHATP28329 748 aa5.1□□□□□ -1.59
SF3B3-214ENST00000572365 HTR1EP28566 365 aa5.1□□□□□ -1.59
SF3B3-214ENST00000572365 HNRNPH1P31943 449 aaKnown RBP5.1□□□□□ -1.59
SF3B3-214ENST00000572365 CA5AP35218 305 aa5.1□□□□□ -1.59
SF3B3-214ENST00000572365 PIK3CAP42336 1068 aa5.1□□□□□ -1.59
SF3B3-214ENST00000572365 RAD23BP54727 409 aa5.1□□□□□ -1.59
SF3B3-214ENST00000572365 DAOAP59103 153 aa5.1□□□□□ -1.59
SF3B3-214ENST00000572365 LAMB3Q13751 1172 aa5.1□□□□□ -1.59
SF3B3-214ENST00000572365 RBMS2Q15434 407 aaKnown RBP5.1□□□□□ -1.59
SF3B3-214ENST00000572365 KYNUQ16719 465 aa5.1□□□□□ -1.59
SF3B3-214ENST00000572365 C6orf141Q5SZD1 244 aa5.1□□□□□ -1.59
SF3B3-214ENST00000572365 WLSQ5T9L3 541 aa5.1□□□□□ -1.59
SF3B3-214ENST00000572365 GKAP1Q5VSY0 366 aaPredicted RBP5.1□□□□□ -1.59
SF3B3-214ENST00000572365 GLDNQ6ZMI3 551 aaPredicted RBP5.1□□□□□ -1.59
SF3B3-214ENST00000572365 MACC1Q6ZN28 852 aa5.1□□□□□ -1.59
SF3B3-214ENST00000572365 QSOX2Q6ZRP7 698 aa5.1□□□□□ -1.59
SF3B3-214ENST00000572365 ENOSF1Q7L5Y1 443 aa5.1□□□□□ -1.59
SF3B3-214ENST00000572365 LINGO2Q7L985 606 aa5.1□□□□□ -1.59
SF3B3-214ENST00000572365 GALNT5Q7Z7M9 940 aa5.1□□□□□ -1.59
SF3B3-214ENST00000572365 PHLDB2Q86SQ0 1253 aa5.1□□□□□ -1.59
SF3B3-214ENST00000572365 UNC93AQ86WB7 457 aa5.1□□□□□ -1.59
SF3B3-214ENST00000572365 SIX6OS1Q8N1H7 587 aa5.1□□□□□ -1.59
SF3B3-214ENST00000572365 BMPERQ8N8U9 685 aa5.1□□□□□ -1.59
SF3B3-214ENST00000572365 XXYLT1Q8NBI6 393 aa5.1□□□□□ -1.59
SF3B3-214ENST00000572365 HUS1BQ8NHY5 278 aa5.1□□□□□ -1.59
SF3B3-214ENST00000572365 GABPB2Q8TAK5 448 aaPredicted RBP5.1□□□□□ -1.59
SF3B3-214ENST00000572365 INPP5DQ92835 1189 aa5.1□□□□□ -1.59
SF3B3-214ENST00000572365 PGAM5Q96HS1 289 aa5.1□□□□□ -1.59
SF3B3-214ENST00000572365 TMEM68Q96MH6 324 aa5.1□□□□□ -1.59
SF3B3-214ENST00000572365 PSMB7Q99436 277 aa5.1□□□□□ -1.59
SF3B3-214ENST00000572365 FAM110AQ9BQ89 295 aa5.1□□□□□ -1.59
SF3B3-214ENST00000572365 APOOQ9BUR5 198 aa5.1□□□□□ -1.59
SF3B3-214ENST00000572365 DDA1Q9BW61 102 aa5.1□□□□□ -1.59
SF3B3-214ENST00000572365 NUDT9Q9BW91 350 aa5.1□□□□□ -1.59
SF3B3-214ENST00000572365 C1QTNF5Q9BXJ0 243 aa5.1□□□□□ -1.59
SF3B3-214ENST00000572365 POLDIP3Q9BY77 421 aaKnown RBP5.1□□□□□ -1.59
SF3B3-214ENST00000572365 TM6SF2Q9BZW4 377 aa5.1□□□□□ -1.59
SF3B3-214ENST00000572365 ING2Q9H160 280 aa5.1□□□□□ -1.59
SF3B3-214ENST00000572365 PLSCR4Q9NRQ2 329 aa5.1□□□□□ -1.59
SF3B3-214ENST00000572365 ABCC13Q9NSE7 274 aa5.1□□□□□ -1.59
SF3B3-214ENST00000572365 CNOT8Q9UFF9 292 aaKnown RBP5.1□□□□□ -1.59
SF3B3-214ENST00000572365 VANGL2Q9ULK5 521 aa5.1□□□□□ -1.59
SF3B3-214ENST00000572365 HS3ST3B1Q9Y662 390 aa5.1□□□□□ -1.59
SF3B3-214ENST00000572365 SESN1Q9Y6P5 492 aa5.1□□□□□ -1.59
SF3B3-214ENST00000572365 STAB1Q9NY15 2570 aa5.09□□□□□ -1.59
SF3B3-214ENST00000572365 BECN2A8MW95 431 aa5.09□□□□□ -1.59
SF3B3-214ENST00000572365 F5H5T6 163 aa5.09□□□□□ -1.59
SF3B3-214ENST00000572365 PDLIM1O00151 329 aa5.09□□□□□ -1.59
SF3B3-214ENST00000572365 MAP2K7O14733 419 aa5.09□□□□□ -1.59
SF3B3-214ENST00000572365 INPP4BO15327 924 aa5.09□□□□□ -1.59
SF3B3-214ENST00000572365 NDUFS3O75489 264 aa5.09□□□□□ -1.59
SF3B3-214ENST00000572365 MTA2O94776 668 aa5.09□□□□□ -1.59
SF3B3-214ENST00000572365 NKX2-2O95096 273 aa5.09□□□□□ -1.59
SF3B3-214ENST00000572365 ASS1P00966 412 aaKnown RBP5.09□□□□□ -1.59
SF3B3-214ENST00000572365 UGT2B4P06133 528 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms