RNA–Protein interactions for RNA: ENST00000571627.5

LITAF-208, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-208ENST00000571627 ZYG11AQ6WRX3 759 aa13.59□□□□□ -0.23
LITAF-208ENST00000571627 APCDD1LQ8NCL9 501 aa13.59□□□□□ -0.23
LITAF-208ENST00000571627 MYRIPQ8NFW9 859 aa13.59□□□□□ -0.23
LITAF-208ENST00000571627 SUN3Q8TAQ9 357 aa13.59□□□□□ -0.23
LITAF-208ENST00000571627 RDH11Q8TC12 318 aa13.59□□□□□ -0.23
LITAF-208ENST00000571627 THAP3Q8WTV1 239 aaPredicted RBP13.59□□□□□ -0.23
LITAF-208ENST00000571627 FAR1Q8WVX9 515 aa13.59□□□□□ -0.23
LITAF-208ENST00000571627 SREK1Q8WXA9 508 aaKnown RBP13.59□□□□□ -0.23
LITAF-208ENST00000571627 RGMAQ96B86 450 aa13.59□□□□□ -0.23
LITAF-208ENST00000571627 L3HYPDHQ96EM0 354 aa13.59□□□□□ -0.23
LITAF-208ENST00000571627 ZNF717Q9BY31 904 aaPredicted RBP13.59□□□□□ -0.23
LITAF-208ENST00000571627 HES7Q9BYE0 225 aa13.59□□□□□ -0.23
LITAF-208ENST00000571627 IQCGQ9H095 443 aaKnown RBP13.59□□□□□ -0.23
LITAF-208ENST00000571627 MKS1Q9NXB0 559 aa13.59□□□□□ -0.23
LITAF-208ENST00000571627 MID2Q9UJV3 735 aa13.59□□□□□ -0.23
LITAF-208ENST00000571627 ZNF223Q9UK11 482 aaPredicted RBP13.59□□□□□ -0.23
LITAF-208ENST00000571627 PPT2Q9UMR5 302 aa13.59□□□□□ -0.23
LITAF-208ENST00000571627 PLIN3O60664 434 aa13.58□□□□□ -0.24
LITAF-208ENST00000571627 CTNSO60931 367 aa13.58□□□□□ -0.24
LITAF-208ENST00000571627 ERLIN1O75477 346 aa13.58□□□□□ -0.24
LITAF-208ENST00000571627 EEDO75530 441 aaKnown RBP13.58□□□□□ -0.24
LITAF-208ENST00000571627 SUPT7LO94864 414 aa13.58□□□□□ -0.24
LITAF-208ENST00000571627 AGFG2O95081 481 aa13.58□□□□□ -0.24
LITAF-208ENST00000571627 MLYCDO95822 493 aa13.58□□□□□ -0.24
LITAF-208ENST00000571627 PROCP04070 461 aa13.58□□□□□ -0.24
LITAF-208ENST00000571627 IFNA16P05015 189 aa13.58□□□□□ -0.24
LITAF-208ENST00000571627 CPN2P22792 545 aa13.58□□□□□ -0.24
LITAF-208ENST00000571627 TPP2P29144 1249 aaPredicted RBP13.58□□□□□ -0.24
LITAF-208ENST00000571627 CDH13P55290 713 aa13.58□□□□□ -0.24
LITAF-208ENST00000571627 HNRNPH2P55795 449 aaKnown RBP13.58□□□□□ -0.24
LITAF-208ENST00000571627 OR1C1Q15619 314 aa13.58□□□□□ -0.24
LITAF-208ENST00000571627 UNC50Q53HI1 259 aa13.58□□□□□ -0.24
LITAF-208ENST00000571627 SGO1Q5FBB7 561 aa13.58□□□□□ -0.24
LITAF-208ENST00000571627 ZNF766Q5HY98 468 aa13.58□□□□□ -0.24
LITAF-208ENST00000571627 FHL5Q5TD97 284 aa13.58□□□□□ -0.24
LITAF-208ENST00000571627 ZNF468Q5VIY5 522 aaPredicted RBP13.58□□□□□ -0.24
LITAF-208ENST00000571627 FRG2Q64ET8 278 aa13.58□□□□□ -0.24
LITAF-208ENST00000571627 TTC19Q6DKK2 380 aaPredicted RBP13.58□□□□□ -0.24
LITAF-208ENST00000571627 SPINK14Q6IE38 97 aa13.58□□□□□ -0.24
LITAF-208ENST00000571627 TRABD2AQ86V40 505 aa13.58□□□□□ -0.24
LITAF-208ENST00000571627 RPS19BP1Q86WX3 136 aaKnown RBP13.58□□□□□ -0.24
LITAF-208ENST00000571627 C4orf33Q8N1A6 199 aa13.58□□□□□ -0.24
LITAF-208ENST00000571627 MDS2Q8NDY4 140 aa13.58□□□□□ -0.24
LITAF-208ENST00000571627 B3GNT7Q8NFL0 401 aa13.58□□□□□ -0.24
LITAF-208ENST00000571627 OR4F6Q8NGB9 312 aa13.58□□□□□ -0.24
LITAF-208ENST00000571627 NCLNQ969V3 563 aa13.58□□□□□ -0.24
LITAF-208ENST00000571627 TMEM237Q96Q45 408 aa13.58□□□□□ -0.24
LITAF-208ENST00000571627 FRG2BQ96QU4 278 aa13.58□□□□□ -0.24
LITAF-208ENST00000571627 UTP23Q9BRU9 249 aaKnown RBP13.58□□□□□ -0.24
LITAF-208ENST00000571627 ALOXE3Q9BYJ1 711 aa13.58□□□□□ -0.24
LITAF-208ENST00000571627 DEFB126Q9BYW3 111 aa13.58□□□□□ -0.24
LITAF-208ENST00000571627 ADAP2Q9NPF8 381 aa13.58□□□□□ -0.24
LITAF-208ENST00000571627 KLHL1Q9NR64 748 aa13.58□□□□□ -0.24
LITAF-208ENST00000571627 OLAHQ9NV23 265 aa13.58□□□□□ -0.24
LITAF-208ENST00000571627 ABI3Q9P2A4 366 aa13.58□□□□□ -0.24
LITAF-208ENST00000571627 TRPS1Q9UHF7 1281 aa13.58□□□□□ -0.24
LITAF-208ENST00000571627 EMCNQ9ULC0 261 aa13.58□□□□□ -0.24
LITAF-208ENST00000571627 SPACA6W5XKT8 324 aa13.58□□□□□ -0.24
LITAF-208ENST00000571627 POLEQ07864 2286 aa13.58□□□□□ -0.24
LITAF-208ENST00000571627 G3V2L1 256 aa13.57□□□□□ -0.24
LITAF-208ENST00000571627 TMPRSS11DO60235 418 aa13.57□□□□□ -0.24
LITAF-208ENST00000571627 GBAP04062 536 aa13.57□□□□□ -0.24
LITAF-208ENST00000571627 RNF224P0DH78 156 aa13.57□□□□□ -0.24
LITAF-208ENST00000571627 BSGP35613 385 aa13.57□□□□□ -0.24
LITAF-208ENST00000571627 CLCN2P51788 898 aa13.57□□□□□ -0.24
LITAF-208ENST00000571627 DNAJB13P59910 316 aa13.57□□□□□ -0.24
LITAF-208ENST00000571627 OC90Q02509 493 aaPredicted RBP13.57□□□□□ -0.24
LITAF-208ENST00000571627 STX4Q12846 297 aa13.57□□□□□ -0.24
LITAF-208ENST00000571627 IFT88Q13099 833 aa13.57□□□□□ -0.24
LITAF-208ENST00000571627 CUL3Q13618 768 aa13.57□□□□□ -0.24
LITAF-208ENST00000571627 ELOAQ14241 798 aaKnown RBP13.57□□□□□ -0.24
LITAF-208ENST00000571627 TERF2Q15554 542 aa13.57□□□□□ -0.24
LITAF-208ENST00000571627 ELAVL1Q15717 326 aaKnown RBP13.57□□□□□ -0.24
LITAF-208ENST00000571627 C18orf63Q68DL7 685 aa13.57□□□□□ -0.24
LITAF-208ENST00000571627 LETMD1Q6P1Q0 360 aa13.57□□□□□ -0.24
LITAF-208ENST00000571627 CROCCP2Q86T23 111 aa13.57□□□□□ -0.24
LITAF-208ENST00000571627 OR4N5Q8IXE1 308 aa13.57□□□□□ -0.24
LITAF-208ENST00000571627 BCORP1Q8N888 145 aa13.57□□□□□ -0.24
LITAF-208ENST00000571627 CCDC63Q8NA47 563 aa13.57□□□□□ -0.24
LITAF-208ENST00000571627 ST6GALNAC3Q8NDV1 305 aa13.57□□□□□ -0.24
LITAF-208ENST00000571627 TRPC4APQ8TEL6 797 aa13.57□□□□□ -0.24
LITAF-208ENST00000571627 ANKRD9Q96BM1 317 aaPredicted RBP13.57□□□□□ -0.24
LITAF-208ENST00000571627 VMP1Q96GC9 406 aa13.57□□□□□ -0.24
LITAF-208ENST00000571627 APOPT1Q96IL0 206 aa13.57□□□□□ -0.24
LITAF-208ENST00000571627 ZNF382Q96SR6 550 aa13.57□□□□□ -0.24
LITAF-208ENST00000571627 SLX1AQ9BQ83 275 aa13.57□□□□□ -0.24
LITAF-208ENST00000571627 ELOVL6Q9H5J4 265 aa13.57□□□□□ -0.24
LITAF-208ENST00000571627 FARSBQ9NSD9 589 aaKnown RBP13.57□□□□□ -0.24
LITAF-208ENST00000571627 SENP1Q9P0U3 644 aa13.57□□□□□ -0.24
LITAF-208ENST00000571627 SNX6Q9UNH7 406 aa13.57□□□□□ -0.24
LITAF-208ENST00000571627 ATG4BQ9Y4P1 393 aa13.57□□□□□ -0.24
LITAF-208ENST00000571627 ICE1Q9Y2F5 2266 aa13.56□□□□□ -0.24
LITAF-208ENST00000571627 A0A0A6YYD5 115 aa13.56□□□□□ -0.24
LITAF-208ENST00000571627 BLACEA4D250 179 aa13.56□□□□□ -0.24
LITAF-208ENST00000571627 SYNDIG1LA6NDD5 238 aa13.56□□□□□ -0.24
LITAF-208ENST00000571627 H3BQF6 201 aa13.56□□□□□ -0.24
LITAF-208ENST00000571627 FGF17O60258 216 aa13.56□□□□□ -0.24
LITAF-208ENST00000571627 PRKNO60260 465 aaPredicted RBP13.56□□□□□ -0.24
LITAF-208ENST00000571627 RASAL1O95294 804 aa13.56□□□□□ -0.24
LITAF-208ENST00000571627 CPA3P15088 417 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms