RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 HEPACAMQ14CZ8 416 aa14.72□□□□□ -0.05
SMG6-207ENST00000570756 ZNF630Q2M218 657 aaPredicted RBP14.72□□□□□ -0.05
SMG6-207ENST00000570756 COX20Q5RI15 118 aa14.72□□□□□ -0.05
SMG6-207ENST00000570756 CTRB2Q6GPI1 263 aa14.72□□□□□ -0.05
SMG6-207ENST00000570756 ANKRD54Q6NXT1 300 aa14.72□□□□□ -0.05
SMG6-207ENST00000570756 ADGRG2Q8IZP9 1017 aa14.72□□□□□ -0.05
SMG6-207ENST00000570756 NXPE1Q8N323 547 aa14.72□□□□□ -0.05
SMG6-207ENST00000570756 TMEM145Q8NBT3 493 aa14.72□□□□□ -0.05
SMG6-207ENST00000570756 OR4M2Q8NGB6 313 aa14.72□□□□□ -0.05
SMG6-207ENST00000570756 NPLOC4Q8TAT6 608 aa14.72□□□□□ -0.05
SMG6-207ENST00000570756 TMEM203Q969S6 136 aa14.72□□□□□ -0.05
SMG6-207ENST00000570756 CCDC120Q96HB5 630 aa14.72□□□□□ -0.05
SMG6-207ENST00000570756 GPR137Q96N19 417 aa14.72□□□□□ -0.05
SMG6-207ENST00000570756 C17orf62Q9BQA9 187 aa14.72□□□□□ -0.05
SMG6-207ENST00000570756 SPATA6Q9NWH7 488 aaPredicted RBP14.72□□□□□ -0.05
SMG6-207ENST00000570756 COMMD3Q9UBI1 195 aa14.72□□□□□ -0.05
SMG6-207ENST00000570756 SPIN1Q9Y657 262 aaPredicted RBP14.72□□□□□ -0.05
SMG6-207ENST00000570756 PRAMEF33A0A0G2JMD5 474 aa14.71□□□□□ -0.05
SMG6-207ENST00000570756 SGK494L7N484 410 aa14.71□□□□□ -0.05
SMG6-207ENST00000570756 PRAMEF10O60809 474 aa14.71□□□□□ -0.05
SMG6-207ENST00000570756 ANXA4P09525 319 aaPredicted RBP14.71□□□□□ -0.05
SMG6-207ENST00000570756 C1SP09871 688 aa14.71□□□□□ -0.05
SMG6-207ENST00000570756 HSD3B1P14060 373 aa14.71□□□□□ -0.05
SMG6-207ENST00000570756 TNNI3P19429 210 aa14.71□□□□□ -0.05
SMG6-207ENST00000570756 ITPKAP23677 461 aa14.71□□□□□ -0.05
SMG6-207ENST00000570756 HSD3B2P26439 372 aa14.71□□□□□ -0.05
SMG6-207ENST00000570756 MVDP53602 400 aa14.71□□□□□ -0.05
SMG6-207ENST00000570756 RHOAP61586 193 aa14.71□□□□□ -0.05
SMG6-207ENST00000570756 ARF5P84085 180 aa14.71□□□□□ -0.05
SMG6-207ENST00000570756 RGS1Q08116 209 aa14.71□□□□□ -0.05
SMG6-207ENST00000570756 IKZF1Q13422 519 aa14.71□□□□□ -0.05
SMG6-207ENST00000570756 DDX39BQ13838 428 aaKnown RBP14.71□□□□□ -0.05
SMG6-207ENST00000570756 MBTPS1Q14703 1052 aa14.71□□□□□ -0.05
SMG6-207ENST00000570756 SUZ12Q15022 739 aaKnown RBP14.71□□□□□ -0.05
SMG6-207ENST00000570756 OCLNQ16625 522 aa14.71□□□□□ -0.05
SMG6-207ENST00000570756 ZXDCQ2QGD7 858 aaPredicted RBP14.71□□□□□ -0.05
SMG6-207ENST00000570756 CYP27C1Q4G0S4 372 aa14.71□□□□□ -0.05
SMG6-207ENST00000570756 RNF219Q5W0B1 726 aaPredicted RBP14.71□□□□□ -0.05
SMG6-207ENST00000570756 C12orf73Q69YU5 71 aa14.71□□□□□ -0.05
SMG6-207ENST00000570756 TEX261Q6UWH6 196 aa14.71□□□□□ -0.05
SMG6-207ENST00000570756 LINGO4Q6UY18 593 aa14.71□□□□□ -0.05
SMG6-207ENST00000570756 CHST9Q7L1S5 443 aa14.71□□□□□ -0.05
SMG6-207ENST00000570756 GHDCQ8N2G8 530 aa14.71□□□□□ -0.05
SMG6-207ENST00000570756 ESX1Q8N693 406 aa14.71□□□□□ -0.05
SMG6-207ENST00000570756 PLA2G15Q8NCC3 412 aa14.71□□□□□ -0.05
SMG6-207ENST00000570756 CXorf40BQ96DE9 158 aa14.71□□□□□ -0.05
SMG6-207ENST00000570756 C1GALT1C1Q96EU7 318 aa14.71□□□□□ -0.05
SMG6-207ENST00000570756 MTERF1Q99551 399 aaKnown RBP14.71□□□□□ -0.05
SMG6-207ENST00000570756 SOSTQ9BQB4 213 aa14.71□□□□□ -0.05
SMG6-207ENST00000570756 SLC35A5Q9BS91 424 aa14.71□□□□□ -0.05
SMG6-207ENST00000570756 RERGLQ9H628 205 aa14.71□□□□□ -0.05
SMG6-207ENST00000570756 HCN2Q9UL51 889 aa14.71□□□□□ -0.05
SMG6-207ENST00000570756 ANGPT4Q9Y264 503 aa14.71□□□□□ -0.05
SMG6-207ENST00000570756 KCNE2Q9Y6J6 123 aa14.71□□□□□ -0.05
SMG6-207ENST00000570756 U3KQ87 197 aa14.71□□□□□ -0.05
SMG6-207ENST00000570756 A0A0U1RQF3 1178 aa14.71□□□□□ -0.06
SMG6-207ENST00000570756 A0A1B0GVM2 712 aa14.71□□□□□ -0.06
SMG6-207ENST00000570756 TRBC2A0A5B9 178 aa14.71□□□□□ -0.06
SMG6-207ENST00000570756 H3BN98 237 aa14.71□□□□□ -0.06
SMG6-207ENST00000570756 PRAMEF4O60810 478 aa14.71□□□□□ -0.06
SMG6-207ENST00000570756 TSPAN9O75954 239 aa14.71□□□□□ -0.06
SMG6-207ENST00000570756 IDSP22304 550 aa14.71□□□□□ -0.06
SMG6-207ENST00000570756 IRS1P35568 1242 aa14.71□□□□□ -0.06
SMG6-207ENST00000570756 MADCAM1Q13477 382 aa14.71□□□□□ -0.06
SMG6-207ENST00000570756 CHRNA6Q15825 494 aa14.71□□□□□ -0.06
SMG6-207ENST00000570756 PRAMEF9Q5VWM5 478 aa14.71□□□□□ -0.06
SMG6-207ENST00000570756 OR8H3Q8N146 312 aa14.71□□□□□ -0.06
SMG6-207ENST00000570756 TTC9BQ8N6N2 239 aa14.71□□□□□ -0.06
SMG6-207ENST00000570756 ATAD1Q8NBU5 361 aa14.71□□□□□ -0.06
SMG6-207ENST00000570756 OR52P1PQ8NH57 321 aa14.71□□□□□ -0.06
SMG6-207ENST00000570756 PARK7Q99497 189 aaKnown RBP14.71□□□□□ -0.06
SMG6-207ENST00000570756 NT5DC2Q9H857 520 aa14.71□□□□□ -0.06
SMG6-207ENST00000570756 GALNT9Q9HCQ5 603 aa14.71□□□□□ -0.06
SMG6-207ENST00000570756 GPATCH2Q9NW75 528 aa14.71□□□□□ -0.06
SMG6-207ENST00000570756 LHX3Q9UBR4 397 aa14.71□□□□□ -0.06
SMG6-207ENST00000570756 KCND3Q9UK17 655 aa14.71□□□□□ -0.06
SMG6-207ENST00000570756 MGAT4BQ9UQ53 548 aa14.71□□□□□ -0.06
SMG6-207ENST00000570756 I3L521 148 aa14.7□□□□□ -0.06
SMG6-207ENST00000570756 NR2F6P10588 404 aa14.7□□□□□ -0.06
SMG6-207ENST00000570756 LHCGRP22888 699 aa14.7□□□□□ -0.06
SMG6-207ENST00000570756 SPAM1P38567 509 aa14.7□□□□□ -0.06
SMG6-207ENST00000570756 FEN1P39748 380 aaKnown RBP14.7□□□□□ -0.06
SMG6-207ENST00000570756 XKP51811 444 aa14.7□□□□□ -0.06
SMG6-207ENST00000570756 DGKEP52429 567 aa14.7□□□□□ -0.06
SMG6-207ENST00000570756 FOXD4Q12950 439 aaPredicted RBP14.7□□□□□ -0.06
SMG6-207ENST00000570756 NOGQ13253 232 aa14.7□□□□□ -0.06
SMG6-207ENST00000570756 IRF5Q13568 498 aa14.7□□□□□ -0.06
SMG6-207ENST00000570756 RIN1Q13671 783 aa14.7□□□□□ -0.06
SMG6-207ENST00000570756 CRTC2Q53ET0 693 aaPredicted RBP14.7□□□□□ -0.06
SMG6-207ENST00000570756 ATAT1Q5SQI0 421 aa14.7□□□□□ -0.06
SMG6-207ENST00000570756 PAQR6Q6TCH4 344 aa14.7□□□□□ -0.06
SMG6-207ENST00000570756 PLEKHH3Q7Z736 793 aa14.7□□□□□ -0.06
SMG6-207ENST00000570756 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.7□□□□□ -0.06
SMG6-207ENST00000570756 GOT1L1Q8NHS2 421 aaPredicted RBP14.7□□□□□ -0.06
SMG6-207ENST00000570756 WDR20Q8TBZ3 569 aa14.7□□□□□ -0.06
SMG6-207ENST00000570756 C11orf24Q96F05 449 aaPredicted RBP14.7□□□□□ -0.06
SMG6-207ENST00000570756 HHIPL1Q96JK4 782 aa14.7□□□□□ -0.06
SMG6-207ENST00000570756 KCNJ15Q99712 375 aa14.7□□□□□ -0.06
SMG6-207ENST00000570756 AIFM2Q9BRQ8 373 aa14.7□□□□□ -0.06
SMG6-207ENST00000570756 BHLHE41Q9C0J9 482 aaPredicted RBP14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms