RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 NPRL3Q12980 569 aa3.42□□□□□ -1.86
UBR1-211ENST00000569971 DMP1Q13316 513 aaPredicted RBP3.42□□□□□ -1.86
UBR1-211ENST00000569971 ITGB3BPQ13352 177 aaPredicted RBP3.42□□□□□ -1.86
UBR1-211ENST00000569971 SNRNP35Q16560 246 aaKnown RBP3.42□□□□□ -1.86
UBR1-211ENST00000569971 SGCBQ16585 318 aa3.42□□□□□ -1.86
UBR1-211ENST00000569971 HFEQ30201 348 aa3.42□□□□□ -1.86
UBR1-211ENST00000569971 ITPRIPL2Q3MIP1 535 aa3.42□□□□□ -1.86
UBR1-211ENST00000569971 RAB12Q6IQ22 244 aa3.42□□□□□ -1.86
UBR1-211ENST00000569971 FAM166AQ6J272 317 aa3.42□□□□□ -1.86
UBR1-211ENST00000569971 PPP1R2P3Q6NXS1 205 aa3.42□□□□□ -1.86
UBR1-211ENST00000569971 PHLDB2Q86SQ0 1253 aa3.42□□□□□ -1.86
UBR1-211ENST00000569971 CROCCP2Q86T23 111 aa3.42□□□□□ -1.86
UBR1-211ENST00000569971 NT5DC3Q86UY8 548 aa3.42□□□□□ -1.86
UBR1-211ENST00000569971 NUDT13Q86X67 352 aa3.42□□□□□ -1.86
UBR1-211ENST00000569971 ZDHHC17Q8IUH5 632 aa3.42□□□□□ -1.86
UBR1-211ENST00000569971 APOBEC3FQ8IUX4 373 aaKnown RBP3.42□□□□□ -1.86
UBR1-211ENST00000569971 CNTN4Q8IWV2 1026 aa3.42□□□□□ -1.86
UBR1-211ENST00000569971 CD302Q8IX05 232 aa3.42□□□□□ -1.86
UBR1-211ENST00000569971 MMD2Q8IY49 270 aa3.42□□□□□ -1.86
UBR1-211ENST00000569971 EFCAB13Q8IY85 973 aa3.42□□□□□ -1.86
UBR1-211ENST00000569971 LGI2Q8N0V4 545 aa3.42□□□□□ -1.86
UBR1-211ENST00000569971 DAW1Q8N136 415 aa3.42□□□□□ -1.86
UBR1-211ENST00000569971 METTL13Q8N6R0 699 aa3.42□□□□□ -1.86
UBR1-211ENST00000569971 RASGEF1AQ8N9B8 481 aa3.42□□□□□ -1.86
UBR1-211ENST00000569971 LMNTD1Q8N9Z9 388 aa3.42□□□□□ -1.86
UBR1-211ENST00000569971 OR4K1Q8NGD4 311 aa3.42□□□□□ -1.86
UBR1-211ENST00000569971 LNX1Q8TBB1 728 aaPredicted RBP3.42□□□□□ -1.86
UBR1-211ENST00000569971 ST7LQ8TDW4 575 aa3.42□□□□□ -1.86
UBR1-211ENST00000569971 ELP5Q8TE02 316 aa3.42□□□□□ -1.86
UBR1-211ENST00000569971 UBLCP1Q8WVY7 318 aaPredicted RBP3.42□□□□□ -1.86
UBR1-211ENST00000569971 MAIP1Q8WWC4 291 aa3.42□□□□□ -1.86
UBR1-211ENST00000569971 CENPTQ96BT3 561 aa3.42□□□□□ -1.86
UBR1-211ENST00000569971 CEP170P1Q96L14 293 aa3.42□□□□□ -1.86
UBR1-211ENST00000569971 IFT74Q96LB3 600 aa3.42□□□□□ -1.86
UBR1-211ENST00000569971 C17orf77Q96MU5 243 aa3.42□□□□□ -1.86
UBR1-211ENST00000569971 ZIM3Q96PE6 472 aa3.42□□□□□ -1.86
UBR1-211ENST00000569971 TAAR1Q96RJ0 339 aa3.42□□□□□ -1.86
UBR1-211ENST00000569971 MYADMQ96S97 322 aa3.42□□□□□ -1.86
UBR1-211ENST00000569971 CCDC3Q9BQI4 270 aa3.42□□□□□ -1.86
UBR1-211ENST00000569971 RTP3Q9BQQ7 232 aa3.42□□□□□ -1.86
UBR1-211ENST00000569971 PI4K2AQ9BTU6 479 aa3.42□□□□□ -1.86
UBR1-211ENST00000569971 CAPS2Q9BXY5 557 aa3.42□□□□□ -1.86
UBR1-211ENST00000569971 OSBPL8Q9BZF1 889 aa3.42□□□□□ -1.86
UBR1-211ENST00000569971 CARD9Q9H257 536 aa3.42□□□□□ -1.86
UBR1-211ENST00000569971 RPAP3Q9H6T3 665 aaPredicted RBP3.42□□□□□ -1.86
UBR1-211ENST00000569971 APOBEC3GQ9HC16 384 aaKnown RBP3.42□□□□□ -1.86
UBR1-211ENST00000569971 PXMP2Q9NR77 195 aa3.42□□□□□ -1.86
UBR1-211ENST00000569971 WRAP73Q9P2S5 460 aaPredicted RBP3.42□□□□□ -1.86
UBR1-211ENST00000569971 TRPC4Q9UBN4 977 aa3.42□□□□□ -1.86
UBR1-211ENST00000569971 MOSPD1Q9UJG1 213 aa3.42□□□□□ -1.86
UBR1-211ENST00000569971 GMEB2Q9UKD1 530 aa3.42□□□□□ -1.86
UBR1-211ENST00000569971 ACAD8Q9UKU7 415 aa3.42□□□□□ -1.86
UBR1-211ENST00000569971 PACSIN2Q9UNF0 486 aaPredicted RBP3.42□□□□□ -1.86
UBR1-211ENST00000569971 UTP11Q9Y3A2 253 aaKnown RBP3.42□□□□□ -1.86
UBR1-211ENST00000569971 HBS1LQ9Y450 684 aaKnown RBP3.42□□□□□ -1.86
UBR1-211ENST00000569971 NFASCO94856 1347 aa3.42□□□□□ -1.86
UBR1-211ENST00000569971 IGSF9BQ9UPX0 1349 aa3.42□□□□□ -1.86
UBR1-211ENST00000569971 IGKV2D-30A0A075B6S6 120 aa3.41□□□□□ -1.86
UBR1-211ENST00000569971 IGHV4OR15-8A0A075B7B6 117 aa3.41□□□□□ -1.86
UBR1-211ENST00000569971 DENND3A2RUS2 1198 aa3.41□□□□□ -1.86
UBR1-211ENST00000569971 ASPDHA6ND91 283 aa3.41□□□□□ -1.86
UBR1-211ENST00000569971 ZNF233A6NK53 670 aa3.41□□□□□ -1.86
UBR1-211ENST00000569971 TMEM110-MUSTN1A8MSY1 372 aa3.41□□□□□ -1.86
UBR1-211ENST00000569971 KBTBD13C9JR72 458 aa3.41□□□□□ -1.86
UBR1-211ENST00000569971 PRSS46E5RG02 174 aa3.41□□□□□ -1.86
UBR1-211ENST00000569971 EIF3HO15372 352 aaKnown RBP eCLIP3.41□□□□□ -1.86
UBR1-211ENST00000569971 TTI1O43156 1089 aa3.41□□□□□ -1.86
UBR1-211ENST00000569971 SYNGR3O43761 229 aa3.41□□□□□ -1.86
UBR1-211ENST00000569971 SPOPO43791 374 aa3.41□□□□□ -1.86
UBR1-211ENST00000569971 ZBTB14O43829 449 aa3.41□□□□□ -1.86
UBR1-211ENST00000569971 SNX3O60493 162 aa3.41□□□□□ -1.86
UBR1-211ENST00000569971 SHOX2O60902 331 aaPredicted RBP3.41□□□□□ -1.86
UBR1-211ENST00000569971 CTSVO60911 334 aa3.41□□□□□ -1.86
UBR1-211ENST00000569971 PDE9AO76083 593 aa3.41□□□□□ -1.86
UBR1-211ENST00000569971 ZBTB11O95625 1053 aaPredicted RBP3.41□□□□□ -1.86
UBR1-211ENST00000569971 FGGP02679 453 aa3.41□□□□□ -1.86
UBR1-211ENST00000569971 STAG3L1P0CL83 205 aa3.41□□□□□ -1.86
UBR1-211ENST00000569971 KRT5P13647 590 aa3.41□□□□□ -1.86
UBR1-211ENST00000569971 VCLP18206 1134 aa3.41□□□□□ -1.86
UBR1-211ENST00000569971 NR1D1P20393 614 aa3.41□□□□□ -1.86
UBR1-211ENST00000569971 MSH3P20585 1137 aa3.41□□□□□ -1.86
UBR1-211ENST00000569971 EPHA2P29317 976 aa3.41□□□□□ -1.86
UBR1-211ENST00000569971 CHRNA3P32297 505 aa3.41□□□□□ -1.86
UBR1-211ENST00000569971 GPC3P51654 580 aa3.41□□□□□ -1.86
UBR1-211ENST00000569971 PDX1P52945 283 aa3.41□□□□□ -1.86
UBR1-211ENST00000569971 BACE1P56817 501 aa3.41□□□□□ -1.86
UBR1-211ENST00000569971 B3GALT5-AS1P59052 145 aa3.41□□□□□ -1.86
UBR1-211ENST00000569971 LINC00205P59089 165 aa3.41□□□□□ -1.86
UBR1-211ENST00000569971 BPIFB3P59826 476 aa3.41□□□□□ -1.86
UBR1-211ENST00000569971 RPS6P62753 249 aaKnown RBP3.41□□□□□ -1.86
UBR1-211ENST00000569971 GNGT1P63211 74 aa3.41□□□□□ -1.86
UBR1-211ENST00000569971 MRPS25P82663 173 aaKnown RBP3.41□□□□□ -1.86
UBR1-211ENST00000569971 DR1Q01658 176 aa3.41□□□□□ -1.86
UBR1-211ENST00000569971 CDR2Q01850 454 aa3.41□□□□□ -1.86
UBR1-211ENST00000569971 MAP2K1Q02750 393 aaPredicted RBP3.41□□□□□ -1.86
UBR1-211ENST00000569971 IFFO1Q0D2I5 559 aa3.41□□□□□ -1.86
UBR1-211ENST00000569971 SPP2Q13103 211 aa3.41□□□□□ -1.86
UBR1-211ENST00000569971 SNTA1Q13424 505 aa3.41□□□□□ -1.86
UBR1-211ENST00000569971 UGP2Q16851 508 aa3.41□□□□□ -1.86
UBR1-211ENST00000569971 AARDQ4LEZ3 155 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms