RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 ETFRF1Q6IPR1 90 aa3.09□□□□□ -1.91
HMGB1P6-201ENST00000569046 SLC27A1Q6PCB7 646 aa3.09□□□□□ -1.91
HMGB1P6-201ENST00000569046 KDELC1Q6UW63 502 aa3.09□□□□□ -1.91
HMGB1P6-201ENST00000569046 ZBTB49Q6ZSB9 765 aa3.09□□□□□ -1.91
HMGB1P6-201ENST00000569046 C11orf57Q6ZUT1 292 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P6-201ENST00000569046 C1orf186Q6ZWK4 172 aa3.09□□□□□ -1.91
HMGB1P6-201ENST00000569046 INTS8Q75QN2 995 aaKnown RBP3.09□□□□□ -1.91
HMGB1P6-201ENST00000569046 ZER1Q7Z7L7 766 aa3.09□□□□□ -1.91
HMGB1P6-201ENST00000569046 CLYBLQ8N0X4 340 aa3.09□□□□□ -1.91
HMGB1P6-201ENST00000569046 CNNM3Q8NE01 707 aa3.09□□□□□ -1.91
HMGB1P6-201ENST00000569046 HEXDCQ8WVB3 486 aa3.09□□□□□ -1.91
HMGB1P6-201ENST00000569046 ZNF606Q8WXB4 792 aa3.09□□□□□ -1.91
HMGB1P6-201ENST00000569046 CPB2Q96IY4 423 aa3.09□□□□□ -1.91
HMGB1P6-201ENST00000569046 VPS39Q96JC1 886 aa3.09□□□□□ -1.91
HMGB1P6-201ENST00000569046 SPATA13Q96N96 652 aa3.09□□□□□ -1.91
HMGB1P6-201ENST00000569046 FAM111AQ96PZ2 611 aa3.09□□□□□ -1.91
HMGB1P6-201ENST00000569046 GAL3ST4Q96RP7 486 aa3.09□□□□□ -1.91
HMGB1P6-201ENST00000569046 NUDCD1Q96RS6 583 aa3.09□□□□□ -1.91
HMGB1P6-201ENST00000569046 DDOQ99489 341 aa3.09□□□□□ -1.91
HMGB1P6-201ENST00000569046 NEURL2Q9BR09 285 aa3.09□□□□□ -1.91
HMGB1P6-201ENST00000569046 P2RY12Q9H244 342 aa3.09□□□□□ -1.91
HMGB1P6-201ENST00000569046 LRMDAQ9H2I8 198 aa3.09□□□□□ -1.91
HMGB1P6-201ENST00000569046 MAGIXQ9H6Y5 334 aa3.09□□□□□ -1.91
HMGB1P6-201ENST00000569046 MINDY3Q9H8M7 445 aa3.09□□□□□ -1.91
HMGB1P6-201ENST00000569046 DNAJC11Q9NVH1 559 aa3.09□□□□□ -1.91
HMGB1P6-201ENST00000569046 RABL2AQ9UBK7 228 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P6-201ENST00000569046 FBXW2Q9UKT8 454 aa3.09□□□□□ -1.91
HMGB1P6-201ENST00000569046 FAF1Q9UNN5 650 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P6-201ENST00000569046 EXOC7Q9UPT5 735 aa3.09□□□□□ -1.91
HMGB1P6-201ENST00000569046 ATP8B3O60423 1300 aa3.09□□□□□ -1.91
HMGB1P6-201ENST00000569046 NFASCO94856 1347 aa3.09□□□□□ -1.91
HMGB1P6-201ENST00000569046 ZMYM6O95789 1325 aa3.09□□□□□ -1.91
HMGB1P6-201ENST00000569046 TNRC6BQ9UPQ9 1833 aaKnown RBP3.09□□□□□ -1.92
HMGB1P6-201ENST00000569046 COL1A2P08123 1366 aa3.09□□□□□ -1.92
HMGB1P6-201ENST00000569046 SPEGQ15772 3267 aa3.09□□□□□ -1.92
HMGB1P6-201ENST00000569046 DENND4CQ5VZ89 1909 aa3.09□□□□□ -1.92
HMGB1P6-201ENST00000569046 EP300Q09472 2414 aaPredicted RBP3.09□□□□□ -1.92
HMGB1P6-201ENST00000569046 GVINP1Q7Z2Y8 2422 aa3.09□□□□□ -1.92
HMGB1P6-201ENST00000569046 PTPRBP23467 1997 aa3.09□□□□□ -1.92
HMGB1P6-201ENST00000569046 NCOR2Q9Y618 2525 aa3.09□□□□□ -1.92
HMGB1P6-201ENST00000569046 GCN1Q92616 2671 aaKnown RBP3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 CACNA1HO95180 2353 aa3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 OBSL1O75147 1896 aa3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 NUP210Q8TEM1 1887 aaPredicted RBP3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 IGLV3-22A0A075B6J6 115 aa3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 A0A087WWV3 80 aa3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 TMEM8BA6NDV4 472 aa3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 SMCO2A6NFE2 343 aa3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 SLC9B1P1A6NJY1 282 aa3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 EIF4E1BA6NMX2 242 aaKnown RBP3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 TMEM178BH3BS89 294 aa3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 I3L4J1 428 aa3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 PTGESO14684 152 aa3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 SLC16A8O95907 504 aa3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 IGHV4-39P01824 125 aa3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 AMBPP02760 352 aa3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 PRB1P04280 392 aa3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 RLN1P04808 185 aa3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 RETP07949 1114 aa3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 TDGF1P13385 188 aa3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 CEBPBP17676 345 aa3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 GM2AP17900 193 aa3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 CCNE1P24864 410 aa3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 RPA1P27694 616 aa3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 TMOD1P28289 359 aa3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 NMBRP28336 390 aa3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 GDI1P31150 447 aa3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 CRIP2P52943 208 aaPredicted RBP3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 ARFIP1P53367 373 aa3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 NAPAP54920 295 aa3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 ARPP19P56211 112 aa3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 TRDNQ13061 729 aa3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 MAJINQ3KP22 176 aa3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 CEP55Q53EZ4 464 aa3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 RAB6CQ53S08 254 aa3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 HSP90AA5PQ58FG0 334 aa3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 PPM1LQ5SGD2 360 aa3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 OTUD3Q5T2D3 398 aaPredicted RBP3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 PDSS1Q5T2R2 415 aa3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 GSG1LQ6UXU4 331 aa3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 ZNF704Q6ZNC4 412 aaPredicted RBP3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 Q6ZS52 159 aa3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 TIGD4Q8IY51 512 aa3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 METTL27Q8N6F8 245 aaPredicted RBP3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 SLC38A9Q8NBW4 561 aa3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 PSMA8Q8TAA3 256 aa3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 C9orf43Q8TAL5 461 aaPredicted RBP3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 WDR20Q8TBZ3 569 aa3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 URGCPQ8TCY9 931 aa3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 RNASE8Q8TDE3 154 aaKnown RBP3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 TMEM255BQ8WV15 326 aa3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 NSMAFQ92636 917 aa3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 TMEM143Q96AN5 459 aa3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 CLDN23Q96B33 292 aa3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 TCEAL4Q96EI5 215 aa3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 BSCL2Q96G97 398 aaPredicted RBP3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 C5orf30Q96GV9 206 aa3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 TCEANC2Q96MN5 208 aa3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 MUS81Q96NY9 551 aa3.08□□□□□ -1.92
HMGB1P6-201ENST00000569046 MS4A10Q96PG2 267 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms