RNA–Protein interactions for RNA: ENST00000568294.5

HDGFL3-206, Transcript of HDGF like 3, humanhuman

TSL 4

Gene HDGFL3, Length 3,397 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-206ENST00000568294 CYP17A1P05093 508 aa8.55□□□□□ -1.04
HDGFL3-206ENST00000568294 NR2F1P10589 423 aa8.55□□□□□ -1.04
HDGFL3-206ENST00000568294 PCGF2P35227 344 aa8.55□□□□□ -1.04
HDGFL3-206ENST00000568294 BMPR1AP36894 532 aa8.55□□□□□ -1.04
HDGFL3-206ENST00000568294 ASMTP46597 345 aa8.55□□□□□ -1.04
HDGFL3-206ENST00000568294 INPP1P49441 399 aa8.55□□□□□ -1.04
HDGFL3-206ENST00000568294 CRISP1P54107 249 aa8.55□□□□□ -1.04
HDGFL3-206ENST00000568294 RAB15P59190 212 aa8.55□□□□□ -1.04
HDGFL3-206ENST00000568294 MESP2Q0VG99 397 aa8.55□□□□□ -1.04
HDGFL3-206ENST00000568294 SSX1Q16384 188 aa8.55□□□□□ -1.04
HDGFL3-206ENST00000568294 SYPL1Q16563 259 aa8.55□□□□□ -1.04
HDGFL3-206ENST00000568294 TCEAL5Q5H9L2 206 aa8.55□□□□□ -1.04
HDGFL3-206ENST00000568294 SNAP47Q5SQN1 464 aa8.55□□□□□ -1.04
HDGFL3-206ENST00000568294 DCST1Q5T197 706 aa8.55□□□□□ -1.04
HDGFL3-206ENST00000568294 ATAD3CQ5T2N8 411 aa8.55□□□□□ -1.04
HDGFL3-206ENST00000568294 PDZK1Q5T2W1 519 aa8.55□□□□□ -1.04
HDGFL3-206ENST00000568294 LIPJQ5W064 366 aa8.55□□□□□ -1.04
HDGFL3-206ENST00000568294 ZNF517Q6ZMY9 492 aaPredicted RBP8.55□□□□□ -1.04
HDGFL3-206ENST00000568294 IQCHQ86VS3 1027 aa8.55□□□□□ -1.04
HDGFL3-206ENST00000568294 OR8J2Q8NGG1 315 aa8.55□□□□□ -1.04
HDGFL3-206ENST00000568294 COL26A1Q96A83 441 aa8.55□□□□□ -1.04
HDGFL3-206ENST00000568294 TMED9Q9BVK6 235 aa8.55□□□□□ -1.04
HDGFL3-206ENST00000568294 RACGAP1Q9H0H5 632 aa8.55□□□□□ -1.04
HDGFL3-206ENST00000568294 GABARAPL1Q9H0R8 117 aa8.55□□□□□ -1.04
HDGFL3-206ENST00000568294 ACER3Q9NUN7 267 aa8.55□□□□□ -1.04
HDGFL3-206ENST00000568294 PEX16Q9Y5Y5 336 aa8.55□□□□□ -1.04
HDGFL3-206ENST00000568294 TPD52L2O43399 206 aaKnown RBP8.54□□□□□ -1.04
HDGFL3-206ENST00000568294 DYRK3O43781 588 aa8.54□□□□□ -1.04
HDGFL3-206ENST00000568294 GREM1O60565 184 aa8.54□□□□□ -1.04
HDGFL3-206ENST00000568294 CTSLP07711 333 aa8.54□□□□□ -1.04
HDGFL3-206ENST00000568294 RAB8AP61006 207 aa8.54□□□□□ -1.04
HDGFL3-206ENST00000568294 CXCR4P61073 352 aa8.54□□□□□ -1.04
HDGFL3-206ENST00000568294 TEAD4Q15561 434 aa8.54□□□□□ -1.04
HDGFL3-206ENST00000568294 SNAPC1Q16533 368 aa8.54□□□□□ -1.04
HDGFL3-206ENST00000568294 GRHL2Q6ISB3 625 aa8.54□□□□□ -1.04
HDGFL3-206ENST00000568294 NLRP8Q86W28 1048 aa8.54□□□□□ -1.04
HDGFL3-206ENST00000568294 GEMIN6Q8WXD5 167 aaKnown RBP8.54□□□□□ -1.04
HDGFL3-206ENST00000568294 SLC9A6Q92581 669 aa8.54□□□□□ -1.04
HDGFL3-206ENST00000568294 GLYATL1Q969I3 302 aa8.54□□□□□ -1.04
HDGFL3-206ENST00000568294 MVB12BQ9H7P6 319 aa8.54□□□□□ -1.04
HDGFL3-206ENST00000568294 GIMAP4Q9NUV9 329 aa8.54□□□□□ -1.04
HDGFL3-206ENST00000568294 TAS2R9Q9NYW1 312 aa8.54□□□□□ -1.04
HDGFL3-206ENST00000568294 NOX1Q9Y5S8 564 aa8.54□□□□□ -1.04
HDGFL3-206ENST00000568294 ARID1BQ8NFD5 2236 aaPredicted RBP8.54□□□□□ -1.04
HDGFL3-206ENST00000568294 C1orf226A1L170 272 aa8.54□□□□□ -1.04
HDGFL3-206ENST00000568294 TMEM229AB2RXF0 380 aa8.54□□□□□ -1.04
HDGFL3-206ENST00000568294 GFYI3L273 518 aa8.54□□□□□ -1.04
HDGFL3-206ENST00000568294 HOXA2O43364 376 aa8.54□□□□□ -1.04
HDGFL3-206ENST00000568294 GUCY1B2O75343 617 aa8.54□□□□□ -1.04
HDGFL3-206ENST00000568294 HOXB9P17482 250 aaPredicted RBP8.54□□□□□ -1.04
HDGFL3-206ENST00000568294 PSMA1P25786 263 aaKnown RBP8.54□□□□□ -1.04
HDGFL3-206ENST00000568294 GJA8P48165 433 aa8.54□□□□□ -1.04
HDGFL3-206ENST00000568294 POLR2LP62875 67 aaKnown RBP8.54□□□□□ -1.04
HDGFL3-206ENST00000568294 MTA1Q13330 715 aa8.54□□□□□ -1.04
HDGFL3-206ENST00000568294 CRTC2Q53ET0 693 aaPredicted RBP8.54□□□□□ -1.04
HDGFL3-206ENST00000568294 C1QTNF12Q5T7M4 302 aa8.54□□□□□ -1.04
HDGFL3-206ENST00000568294 TMEM215Q68D42 235 aa8.54□□□□□ -1.04
HDGFL3-206ENST00000568294 FRMPD2BQ6IN97 320 aa8.54□□□□□ -1.04
HDGFL3-206ENST00000568294 KIAA1161Q6NSJ0 714 aa8.54□□□□□ -1.04
HDGFL3-206ENST00000568294 PNCKQ6P2M8 343 aa8.54□□□□□ -1.04
HDGFL3-206ENST00000568294 SFTPA1Q8IWL2 248 aa8.54□□□□□ -1.04
HDGFL3-206ENST00000568294 MTERF3Q96E29 417 aa8.54□□□□□ -1.04
HDGFL3-206ENST00000568294 RANGRFQ9HD47 186 aaPredicted RBP8.54□□□□□ -1.04
HDGFL3-206ENST00000568294 DYRK4Q9NR20 520 aa8.54□□□□□ -1.04
HDGFL3-206ENST00000568294 ASAH2Q9NR71 780 aa8.54□□□□□ -1.04
HDGFL3-206ENST00000568294 SPATA6Q9NWH7 488 aaPredicted RBP8.54□□□□□ -1.04
HDGFL3-206ENST00000568294 FBXL12Q9NXK8 326 aa8.54□□□□□ -1.04
HDGFL3-206ENST00000568294 ASIC5Q9NY37 505 aa8.54□□□□□ -1.04
HDGFL3-206ENST00000568294 CNIH4Q9P003 139 aa8.54□□□□□ -1.04
HDGFL3-206ENST00000568294 SRRDQ9UH36 339 aa8.54□□□□□ -1.04
HDGFL3-206ENST00000568294 PCDHGB1Q9Y5G3 927 aa8.54□□□□□ -1.04
HDGFL3-206ENST00000568294 TRBV23OR9-2A0A075B6M9 112 aa8.53□□□□□ -1.04
HDGFL3-206ENST00000568294 CPNE3O75131 537 aaKnown RBP8.53□□□□□ -1.04
HDGFL3-206ENST00000568294 CSO75390 466 aaKnown RBP8.53□□□□□ -1.04
HDGFL3-206ENST00000568294 PSIP1O75475 530 aaKnown RBP8.53□□□□□ -1.04
HDGFL3-206ENST00000568294 GSTM5P46439 218 aa8.53□□□□□ -1.04
HDGFL3-206ENST00000568294 HTRA3P83110 453 aa8.53□□□□□ -1.04
HDGFL3-206ENST00000568294 VEZF1Q14119 521 aa8.53□□□□□ -1.04
HDGFL3-206ENST00000568294 SPHARQ15513 63 aa8.53□□□□□ -1.04
HDGFL3-206ENST00000568294 ZNF181Q2M3W8 571 aa8.53□□□□□ -1.04
HDGFL3-206ENST00000568294 GPAT3Q53EU6 434 aa8.53□□□□□ -1.04
HDGFL3-206ENST00000568294 PLEKHS1Q5SXH7 462 aa8.53□□□□□ -1.04
HDGFL3-206ENST00000568294 AMER3Q8N944 861 aa8.53□□□□□ -1.04
HDGFL3-206ENST00000568294 DNAJB8Q8NHS0 232 aa8.53□□□□□ -1.04
HDGFL3-206ENST00000568294 FIBINQ8TAL6 211 aa8.53□□□□□ -1.04
HDGFL3-206ENST00000568294 FCGR1BQ92637 280 aa8.53□□□□□ -1.04
HDGFL3-206ENST00000568294 RELTQ969Z4 430 aa8.53□□□□□ -1.04
HDGFL3-206ENST00000568294 LRR1Q96L50 414 aa8.53□□□□□ -1.04
HDGFL3-206ENST00000568294 TMEM246Q9BRR3 403 aa8.53□□□□□ -1.04
HDGFL3-206ENST00000568294 HDHD5Q9BXW7 423 aa8.53□□□□□ -1.04
HDGFL3-206ENST00000568294 HOXD1Q9GZZ0 328 aa8.53□□□□□ -1.04
HDGFL3-206ENST00000568294 EGLN3Q9H6Z9 239 aa8.53□□□□□ -1.04
HDGFL3-206ENST00000568294 SLAMF7Q9NQ25 335 aa8.53□□□□□ -1.04
HDGFL3-206ENST00000568294 N6AMT1Q9Y5N5 214 aa8.53□□□□□ -1.04
HDGFL3-206ENST00000568294 TRPM7Q96QT4 1865 aa8.53□□□□□ -1.04
HDGFL3-206ENST00000568294 SDK1Q7Z5N4 2213 aa8.53□□□□□ -1.04
HDGFL3-206ENST00000568294 A0A1W2PS29 197 aa8.53□□□□□ -1.04
HDGFL3-206ENST00000568294 SAGE2PA6NJ88 616 aa8.53□□□□□ -1.04
HDGFL3-206ENST00000568294 CENPXA8MT69 81 aa8.53□□□□□ -1.04
HDGFL3-206ENST00000568294 UGT2B17O75795 530 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms