RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 SNX11Q9Y5W9 270 aa10.44□□□□□ -0.74
PALB2-206ENST00000568219 TEX13CA0A0J9YWL9 993 aa10.44□□□□□ -0.74
PALB2-206ENST00000568219 ACSL1P33121 698 aa10.44□□□□□ -0.74
PALB2-206ENST00000568219 PTGER1P34995 402 aa10.44□□□□□ -0.74
PALB2-206ENST00000568219 STARP49675 285 aa10.44□□□□□ -0.74
PALB2-206ENST00000568219 RRAS2P62070 204 aaPredicted RBP10.44□□□□□ -0.74
PALB2-206ENST00000568219 KLHL22Q53GT1 634 aa10.44□□□□□ -0.74
PALB2-206ENST00000568219 UBXN11Q5T124 520 aa10.44□□□□□ -0.74
PALB2-206ENST00000568219 AGMOQ6ZNB7 445 aa10.44□□□□□ -0.74
PALB2-206ENST00000568219 SERPINA11Q86U17 422 aa10.44□□□□□ -0.74
PALB2-206ENST00000568219 CCDC190Q86UF4 302 aa10.44□□□□□ -0.74
PALB2-206ENST00000568219 NLGN4YQ8NFZ3 816 aaPredicted RBP10.44□□□□□ -0.74
PALB2-206ENST00000568219 ZNF607Q96SK3 696 aa10.44□□□□□ -0.74
PALB2-206ENST00000568219 SORBS1Q9BX66 1292 aaKnown RBP10.44□□□□□ -0.74
PALB2-206ENST00000568219 C3orf14Q9HBI5 128 aa10.44□□□□□ -0.74
PALB2-206ENST00000568219 TXNL4BQ9NX01 149 aaKnown RBP10.44□□□□□ -0.74
PALB2-206ENST00000568219 C5AR2Q9P296 337 aa10.44□□□□□ -0.74
PALB2-206ENST00000568219 TRPS1Q9UHF7 1281 aa10.44□□□□□ -0.74
PALB2-206ENST00000568219 GTF2A1LQ9UNN4 478 aa10.44□□□□□ -0.74
PALB2-206ENST00000568219 OARD1Q9Y530 152 aa10.44□□□□□ -0.74
PALB2-206ENST00000568219 GABRR3A8MPY1 467 aa10.43□□□□□ -0.74
PALB2-206ENST00000568219 KLHL18O94889 574 aa10.43□□□□□ -0.74
PALB2-206ENST00000568219 PKLRP30613 574 aa10.43□□□□□ -0.74
PALB2-206ENST00000568219 LCN1P31025 176 aa10.43□□□□□ -0.74
PALB2-206ENST00000568219 NUP62P37198 522 aaPredicted RBP10.43□□□□□ -0.74
PALB2-206ENST00000568219 NSG1P42857 185 aa10.43□□□□□ -0.74
PALB2-206ENST00000568219 PPP3R1P63098 170 aa10.43□□□□□ -0.74
PALB2-206ENST00000568219 ZNF91Q05481 1191 aa10.43□□□□□ -0.74
PALB2-206ENST00000568219 CBLBQ13191 982 aa10.43□□□□□ -0.74
PALB2-206ENST00000568219 SLC25A25Q6KCM7 469 aa10.43□□□□□ -0.74
PALB2-206ENST00000568219 LINGO2Q7L985 606 aa10.43□□□□□ -0.74
PALB2-206ENST00000568219 ABI3BPQ7Z7G0 1075 aa10.43□□□□□ -0.74
PALB2-206ENST00000568219 CACUL1Q86Y37 369 aa10.43□□□□□ -0.74
PALB2-206ENST00000568219 KLBQ86Z14 1044 aa10.43□□□□□ -0.74
PALB2-206ENST00000568219 CCDC71Q8IV32 467 aaPredicted RBP10.43□□□□□ -0.74
PALB2-206ENST00000568219 OR8J1Q8NGP2 316 aa10.43□□□□□ -0.74
PALB2-206ENST00000568219 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.43□□□□□ -0.742e-6■■■■■ 29.6
PALB2-206ENST00000568219 ST8SIA2Q92186 375 aa10.43□□□□□ -0.74
PALB2-206ENST00000568219 CIDECQ96AQ7 238 aaPredicted RBP10.43□□□□□ -0.74
PALB2-206ENST00000568219 PTPN18Q99952 460 aa10.43□□□□□ -0.74
PALB2-206ENST00000568219 C17orf62Q9BQA9 187 aa10.43□□□□□ -0.74
PALB2-206ENST00000568219 FUZQ9BT04 418 aa10.43□□□□□ -0.74
PALB2-206ENST00000568219 GRXCR2A6NFK2 248 aa10.43□□□□□ -0.74
PALB2-206ENST00000568219 TAPBPO15533 448 aa10.43□□□□□ -0.74
PALB2-206ENST00000568219 HLA-DPB1P04440 258 aa10.43□□□□□ -0.74
PALB2-206ENST00000568219 SYPP08247 313 aa10.43□□□□□ -0.74
PALB2-206ENST00000568219 PTX3P26022 381 aaPredicted RBP10.43□□□□□ -0.74
PALB2-206ENST00000568219 PREPP48147 710 aa10.43□□□□□ -0.74
PALB2-206ENST00000568219 ZNF140P52738 457 aaPredicted RBP10.43□□□□□ -0.74
PALB2-206ENST00000568219 CDH11P55287 796 aa10.43□□□□□ -0.74
PALB2-206ENST00000568219 DSTNP60981 165 aa10.43□□□□□ -0.74
PALB2-206ENST00000568219 P2RY14Q15391 338 aa10.43□□□□□ -0.74
PALB2-206ENST00000568219 RAB41Q5JT25 222 aa10.43□□□□□ -0.74
PALB2-206ENST00000568219 COX20Q5RI15 118 aa10.43□□□□□ -0.74
PALB2-206ENST00000568219 OR51G2Q8NGK0 314 aa10.43□□□□□ -0.74
PALB2-206ENST00000568219 C1orf74Q96LT6 269 aa10.43□□□□□ -0.74
PALB2-206ENST00000568219 PARK7Q99497 189 aaKnown RBP10.43□□□□□ -0.74
PALB2-206ENST00000568219 C2orf49Q9BVC5 232 aaPredicted RBP10.43□□□□□ -0.74
PALB2-206ENST00000568219 RBFOX1Q9NWB1 397 aaKnown RBP10.43□□□□□ -0.74
PALB2-206ENST00000568219 OR6C2Q9NZP2 312 aa10.43□□□□□ -0.74
PALB2-206ENST00000568219 GABRQQ9UN88 632 aa10.43□□□□□ -0.74
PALB2-206ENST00000568219 C2orf78A6NCI8 922 aa10.43□□□□□ -0.74
PALB2-206ENST00000568219 STX11O75558 287 aa10.43□□□□□ -0.74
PALB2-206ENST00000568219 PRAMEF12O95522 483 aa10.43□□□□□ -0.74
PALB2-206ENST00000568219 SNAI1O95863 264 aaPredicted RBP10.43□□□□□ -0.74
PALB2-206ENST00000568219 RPS25P62851 125 aaKnown RBP10.43□□□□□ -0.74
PALB2-206ENST00000568219 PSPHP78330 225 aa10.43□□□□□ -0.74
PALB2-206ENST00000568219 DOC2AQ14183 400 aa10.43□□□□□ -0.74
PALB2-206ENST00000568219 CXXC5Q7LFL8 322 aaKnown RBP10.43□□□□□ -0.74
PALB2-206ENST00000568219 CHAC2Q8WUX2 184 aa10.43□□□□□ -0.74
PALB2-206ENST00000568219 AP2M1Q96CW1 435 aa10.43□□□□□ -0.74
PALB2-206ENST00000568219 C1QTNF6Q9BXI9 259 aa10.43□□□□□ -0.74
PALB2-206ENST00000568219 SLC28A3Q9HAS3 691 aa10.43□□□□□ -0.74
PALB2-206ENST00000568219 CXXC1Q9P0U4 656 aaPredicted RBP10.43□□□□□ -0.74
PALB2-206ENST00000568219 ADAMTSL1Q8N6G6 1762 aa10.43□□□□□ -0.74
PALB2-206ENST00000568219 SLC22A5O76082 557 aa10.42□□□□□ -0.74
PALB2-206ENST00000568219 RAB36O95755 333 aa10.42□□□□□ -0.74
PALB2-206ENST00000568219 SMIM11AP58511 58 aa10.42□□□□□ -0.74
PALB2-206ENST00000568219 ZNF280AP59817 542 aaPredicted RBP10.42□□□□□ -0.74
PALB2-206ENST00000568219 PCBP1Q15365 356 aaKnown RBP eCLIP10.42□□□□□ -0.74
PALB2-206ENST00000568219 UPP1Q16831 310 aa10.42□□□□□ -0.74
PALB2-206ENST00000568219 KANSL1Q7Z3B3 1105 aa10.42□□□□□ -0.74
PALB2-206ENST00000568219 DDX53Q86TM3 631 aaKnown RBP10.42□□□□□ -0.74
PALB2-206ENST00000568219 KCNN1Q92952 543 aa10.42□□□□□ -0.74
PALB2-206ENST00000568219 SECISBP2Q96T21 854 aaKnown RBP10.42□□□□□ -0.74
PALB2-206ENST00000568219 EPYCQ99645 322 aa10.42□□□□□ -0.74
PALB2-206ENST00000568219 RANBP3Q9H6Z4 567 aaPredicted RBP10.42□□□□□ -0.74
PALB2-206ENST00000568219 SLC35C2Q9NQQ7 365 aa10.42□□□□□ -0.74
PALB2-206ENST00000568219 ZNF69Q9UC07 566 aa10.42□□□□□ -0.74
PALB2-206ENST00000568219 CSO75390 466 aaKnown RBP10.42□□□□□ -0.74
PALB2-206ENST00000568219 IGSF6O95976 241 aa10.42□□□□□ -0.74
PALB2-206ENST00000568219 PRR35P0CG20 571 aa10.42□□□□□ -0.74
PALB2-206ENST00000568219 GIFP27352 417 aa10.42□□□□□ -0.74
PALB2-206ENST00000568219 CDH4P55283 916 aa10.42□□□□□ -0.74
PALB2-206ENST00000568219 IRF3Q14653 427 aa10.42□□□□□ -0.74
PALB2-206ENST00000568219 TSPAN33Q86UF1 283 aa10.42□□□□□ -0.74
PALB2-206ENST00000568219 THOC6Q86W42 341 aaKnown RBP10.42□□□□□ -0.74
PALB2-206ENST00000568219 SCAMP4Q969E2 229 aa10.42□□□□□ -0.74
PALB2-206ENST00000568219 TMEM184CQ9NVA4 438 aa10.42□□□□□ -0.74
PALB2-206ENST00000568219 ZNF226Q9NYT6 803 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms