RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 TP53TG5Q9Y2B4 290 aa11.63□□□□□ -0.55
RNF40-211ENST00000567365 PCDHGB7Q9Y5F8 929 aa11.63□□□□□ -0.55
RNF40-211ENST00000567365 DNAJC15Q9Y5T4 150 aa11.63□□□□□ -0.55
RNF40-211ENST00000567365 WASHC1A8K0Z3 465 aa11.62□□□□□ -0.55
RNF40-211ENST00000567365 TMEM233B4DJY2 109 aa11.62□□□□□ -0.55
RNF40-211ENST00000567365 CLDN4O14493 209 aa11.62□□□□□ -0.55
RNF40-211ENST00000567365 AZIN1O14977 448 aa11.62□□□□□ -0.55
RNF40-211ENST00000567365 ITM2AO43736 263 aa11.62□□□□□ -0.55
RNF40-211ENST00000567365 PRKRAO75569 313 aaKnown RBP11.62□□□□□ -0.55
RNF40-211ENST00000567365 AIFM1O95831 613 aa11.62□□□□□ -0.55
RNF40-211ENST00000567365 GBAP04062 536 aa11.62□□□□□ -0.55
RNF40-211ENST00000567365 KLK1P06870 262 aa11.62□□□□□ -0.55
RNF40-211ENST00000567365 NR1D1P20393 614 aa11.62□□□□□ -0.55
RNF40-211ENST00000567365 CPN2P22792 545 aa11.62□□□□□ -0.55
RNF40-211ENST00000567365 PPP2R1BP30154 601 aa11.62□□□□□ -0.55
RNF40-211ENST00000567365 SOX11P35716 441 aa11.62□□□□□ -0.55
RNF40-211ENST00000567365 OR4D2P58180 307 aa11.62□□□□□ -0.55
RNF40-211ENST00000567365 SLC26A5P58743 744 aa11.62□□□□□ -0.55
RNF40-211ENST00000567365 TERF2Q15554 542 aa11.62□□□□□ -0.55
RNF40-211ENST00000567365 TTMPQ5BVD1 217 aa11.62□□□□□ -0.55
RNF40-211ENST00000567365 MFSD4BQ5TF39 518 aa11.62□□□□□ -0.55
RNF40-211ENST00000567365 H3F3CQ6NXT2 135 aa11.62□□□□□ -0.55
RNF40-211ENST00000567365 SCIMPQ6UWF3 145 aa11.62□□□□□ -0.55
RNF40-211ENST00000567365 IGFL3Q6UXB1 125 aa11.62□□□□□ -0.55
RNF40-211ENST00000567365 PAGE2Q7Z2X7 111 aa11.62□□□□□ -0.55
RNF40-211ENST00000567365 HDXQ7Z353 690 aa11.62□□□□□ -0.55
RNF40-211ENST00000567365 NUDCD3Q8IVD9 361 aa11.62□□□□□ -0.55
RNF40-211ENST00000567365 PARP9Q8IXQ6 854 aa11.62□□□□□ -0.55
RNF40-211ENST00000567365 C1orf52Q8N6N3 182 aaKnown RBP11.62□□□□□ -0.55
RNF40-211ENST00000567365 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.62□□□□□ -0.55
RNF40-211ENST00000567365 UCN3Q969E3 161 aa11.62□□□□□ -0.55
RNF40-211ENST00000567365 TM4SF18Q96CE8 201 aa11.62□□□□□ -0.55
RNF40-211ENST00000567365 METTL2AQ96IZ6 378 aaKnown RBP11.62□□□□□ -0.55
RNF40-211ENST00000567365 FCRL1Q96LA6 429 aa11.62□□□□□ -0.55
RNF40-211ENST00000567365 LPAR4Q99677 370 aa11.62□□□□□ -0.55
RNF40-211ENST00000567365 LHPPQ9H008 270 aa11.62□□□□□ -0.55
RNF40-211ENST00000567365 RPF2Q9H7B2 306 aaKnown RBP11.62□□□□□ -0.55
RNF40-211ENST00000567365 ZNF395Q9H8N7 513 aaPredicted RBP11.62□□□□□ -0.55
RNF40-211ENST00000567365 MMP25Q9NPA2 562 aa11.62□□□□□ -0.55
RNF40-211ENST00000567365 ARGLU1Q9NWB6 273 aaPredicted RBP11.62□□□□□ -0.55
RNF40-211ENST00000567365 NMRK1Q9NWW6 199 aa11.62□□□□□ -0.55
RNF40-211ENST00000567365 GPR83Q9NYM4 423 aa11.62□□□□□ -0.55
RNF40-211ENST00000567365 VTI1BQ9UEU0 232 aa11.62□□□□□ -0.55
RNF40-211ENST00000567365 ZDHHC2Q9UIJ5 367 aa11.62□□□□□ -0.55
RNF40-211ENST00000567365 CES1P1Q9UKY3 287 aa11.62□□□□□ -0.55
RNF40-211ENST00000567365 TRAF6Q9Y4K3 522 aa11.62□□□□□ -0.55
RNF40-211ENST00000567365 SETXQ7Z333 2677 aaKnown RBP11.62□□□□□ -0.55
RNF40-211ENST00000567365 SYNDIG1LA6NDD5 238 aa11.61□□□□□ -0.55
RNF40-211ENST00000567365 SAGE2PA6NJ88 616 aa11.61□□□□□ -0.55
RNF40-211ENST00000567365 A6NL46 340 aa11.61□□□□□ -0.55
RNF40-211ENST00000567365 FGF17O60258 216 aa11.61□□□□□ -0.55
RNF40-211ENST00000567365 LDB3O75112 727 aa11.61□□□□□ -0.55
RNF40-211ENST00000567365 RSL1D1O76021 490 aaKnown RBP11.61□□□□□ -0.55
RNF40-211ENST00000567365 SERPINE1P05121 402 aa11.61□□□□□ -0.55
RNF40-211ENST00000567365 ITGAMP11215 1152 aa11.61□□□□□ -0.55
RNF40-211ENST00000567365 CHI3L2Q15782 390 aa11.61□□□□□ -0.55
RNF40-211ENST00000567365 LACTB2Q53H82 288 aaPredicted RBP11.61□□□□□ -0.55
RNF40-211ENST00000567365 XKR7Q5GH72 579 aa11.61□□□□□ -0.55
RNF40-211ENST00000567365 VWA5B1Q5TIE3 1220 aa11.61□□□□□ -0.55
RNF40-211ENST00000567365 JMJD6Q6NYC1 403 aaPredicted RBP11.61□□□□□ -0.55
RNF40-211ENST00000567365 CYP20A1Q6UW02 462 aa11.61□□□□□ -0.55
RNF40-211ENST00000567365 KBTBD2Q8IY47 623 aa11.61□□□□□ -0.55
RNF40-211ENST00000567365 CLYBLQ8N0X4 340 aa11.61□□□□□ -0.55
RNF40-211ENST00000567365 ARMC10Q8N2F6 343 aa11.61□□□□□ -0.55
RNF40-211ENST00000567365 EFCAB3Q8N7B9 438 aa11.61□□□□□ -0.55
RNF40-211ENST00000567365 APCDD1LQ8NCL9 501 aa11.61□□□□□ -0.55
RNF40-211ENST00000567365 OR2T11Q8NH01 316 aa11.61□□□□□ -0.55
RNF40-211ENST00000567365 DNAJB14Q8TBM8 379 aa11.61□□□□□ -0.55
RNF40-211ENST00000567365 M1APQ8TC57 530 aa11.61□□□□□ -0.55
RNF40-211ENST00000567365 ELP5Q8TE02 316 aa11.61□□□□□ -0.55
RNF40-211ENST00000567365 TANKQ92844 425 aa11.61□□□□□ -0.55
RNF40-211ENST00000567365 ATP6V1G3Q96LB4 118 aa11.61□□□□□ -0.55
RNF40-211ENST00000567365 SORT1Q99523 831 aa11.61□□□□□ -0.55
RNF40-211ENST00000567365 NPAS2Q99743 824 aa11.61□□□□□ -0.55
RNF40-211ENST00000567365 ZBTB20Q9HC78 741 aaPredicted RBP11.61□□□□□ -0.55
RNF40-211ENST00000567365 KCNK9Q9NPC2 374 aa11.61□□□□□ -0.55
RNF40-211ENST00000567365 ADAP2Q9NPF8 381 aa11.61□□□□□ -0.55
RNF40-211ENST00000567365 ZNF71Q9NQZ8 489 aaPredicted RBP11.61□□□□□ -0.55
RNF40-211ENST00000567365 ZNF446Q9NWS9 450 aa11.61□□□□□ -0.55
RNF40-211ENST00000567365 C5AR2Q9P296 337 aa11.61□□□□□ -0.55
RNF40-211ENST00000567365 MCM8Q9UJA3 840 aa11.61□□□□□ -0.55
RNF40-211ENST00000567365 ZNF223Q9UK11 482 aaPredicted RBP11.61□□□□□ -0.55
RNF40-211ENST00000567365 PTGDR2Q9Y5Y4 395 aa11.61□□□□□ -0.55
RNF40-211ENST00000567365 SPACA6W5XKT8 324 aa11.61□□□□□ -0.55
RNF40-211ENST00000567365 WDR91A4D1P6 747 aa11.6□□□□□ -0.55
RNF40-211ENST00000567365 GOLGA6L10A6NI86 522 aa11.6□□□□□ -0.55
RNF40-211ENST00000567365 TMEM114B3SHH9 223 aa11.6□□□□□ -0.55
RNF40-211ENST00000567365 PGRMC2O15173 223 aa11.6□□□□□ -0.55
RNF40-211ENST00000567365 LYPLA1O75608 230 aaPredicted RBP11.6□□□□□ -0.55
RNF40-211ENST00000567365 NR2F6P10588 404 aa11.6□□□□□ -0.55
RNF40-211ENST00000567365 ICAM2P13598 275 aa11.6□□□□□ -0.55
RNF40-211ENST00000567365 BGNP21810 368 aa11.6□□□□□ -0.55
RNF40-211ENST00000567365 GRK2P25098 689 aa11.6□□□□□ -0.55
RNF40-211ENST00000567365 ITGA3P26006 1051 aa11.6□□□□□ -0.55
RNF40-211ENST00000567365 TIA1P31483 386 aaKnown RBP eCLIP11.6□□□□□ -0.55
RNF40-211ENST00000567365 BUD31P41223 144 aaPredicted RBP11.6□□□□□ -0.55
RNF40-211ENST00000567365 TRA2BP62995 288 aaKnown RBP11.6□□□□□ -0.55
RNF40-211ENST00000567365 FOLH1Q04609 750 aa11.6□□□□□ -0.55
RNF40-211ENST00000567365 SLC13A2Q13183 592 aa11.6□□□□□ -0.55
RNF40-211ENST00000567365 RAPSNQ13702 412 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms