RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 GID4Q8IVV7 300 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 DSELQ8IZU8 1212 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 AHCYL2Q96HN2 611 aaKnown RBP3.22□□□□□ -1.89
CHD9-213ENST00000564845 MCUBQ9NWR8 336 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 ACSL6Q9UKU0 697 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 ZNF780BQ9Y6R6 833 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 ANKDD1BA6NHY2 528 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 ZSCAN9O15535 394 aaPredicted RBP3.22□□□□□ -1.89
CHD9-213ENST00000564845 CPSF4O95639 269 aaKnown RBP3.22□□□□□ -1.89
CHD9-213ENST00000564845 MYL9P24844 172 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 POLR2IP36954 125 aaKnown RBP3.22□□□□□ -1.89
CHD9-213ENST00000564845 CTSCP53634 463 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 LSM11P83369 360 aaKnown RBP eCLIP3.22□□□□□ -1.89
CHD9-213ENST00000564845 ARHGAP19Q14CB8 494 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 CLVS2Q5SYC1 327 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 FAAH2Q6GMR7 532 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 METAP1DQ6UB28 335 aaPredicted RBP3.22□□□□□ -1.89
CHD9-213ENST00000564845 DPPA2Q7Z7J5 298 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 CILP2Q8IUL8 1156 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 C22orf15Q8WYQ4 148 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 POTEKPQ9BYX7 375 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 AKTIPQ9H8T0 292 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 TCF7L2Q9NQB0 619 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 NUDT4Q9NZJ9 180 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 SLC22A14Q9Y267 594 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 ASB4Q9Y574 426 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 PCDHB3Q9Y5E6 796 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 HAT1O14929 419 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 SLC35G4P0C7Q5 338 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 PRKCHP24723 683 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 UGT2B10P36537 528 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 LIMK2P53671 638 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 PPP3R1P63098 170 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 DSC1Q08554 894 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 PRAMEF17Q5VTA0 474 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 SPAG16Q8N0X2 631 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 VN1R2Q8NFZ6 395 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 OR4L1Q8NH43 312 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 OR52J3Q8NH60 311 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 PHOSPHO2Q8TCD6 241 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 CHD5Q8TDI0 1954 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 SMG7Q92540 1137 aaKnown RBP3.22□□□□□ -1.89
CHD9-213ENST00000564845 TM9SF2Q99805 663 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 SPOCK3Q9BQ16 436 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 G6PC3Q9BUM1 346 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 SLCO5A1Q9H2Y9 848 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 IKZF5Q9H5V7 419 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 MVB12BQ9H7P6 319 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 IGSF5Q9NSI5 407 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 WWOXQ9NZC7 414 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.22□□□□□ -1.89
CHD9-213ENST00000564845 LIPT1Q9Y234 373 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 MYRFQ9Y2G1 1151 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 RAP2CQ9Y3L5 183 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 DNAJC15Q9Y5T4 150 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 MCIDASD6RGH6 385 aa3.21□□□□□ -1.89
CHD9-213ENST00000564845 FAM227AF5H4B4 570 aa3.21□□□□□ -1.89
CHD9-213ENST00000564845 PRAMEF2O60811 474 aa3.21□□□□□ -1.89
CHD9-213ENST00000564845 ERAL1O75616 437 aaKnown RBP3.21□□□□□ -1.89
CHD9-213ENST00000564845 ARL6IP5O75915 188 aa3.21□□□□□ -1.89
CHD9-213ENST00000564845 HIST1H1TP22492 207 aaPredicted RBP3.21□□□□□ -1.89
CHD9-213ENST00000564845 EVI2BP34910 448 aa3.21□□□□□ -1.89
CHD9-213ENST00000564845 MAGEA11P43364 429 aa3.21□□□□□ -1.89
CHD9-213ENST00000564845 SCAND1P57086 179 aa3.21□□□□□ -1.89
CHD9-213ENST00000564845 LSM3P62310 102 aaKnown RBP3.21□□□□□ -1.89
CHD9-213ENST00000564845 MYBPC1Q00872 1141 aa3.21□□□□□ -1.89
CHD9-213ENST00000564845 CHRNEQ04844 493 aa3.21□□□□□ -1.89
CHD9-213ENST00000564845 C1orf61Q13536 156 aa3.21□□□□□ -1.89
CHD9-213ENST00000564845 RNF43Q68DV7 783 aa3.21□□□□□ -1.89
CHD9-213ENST00000564845 BCDIN3DQ7Z5W3 292 aaKnown RBP3.21□□□□□ -1.89
CHD9-213ENST00000564845 ZNF605Q86T29 641 aa3.21□□□□□ -1.89
CHD9-213ENST00000564845 KIAA2013Q8IYS2 634 aa3.21□□□□□ -1.89
CHD9-213ENST00000564845 CHPFQ8IZ52 775 aa3.21□□□□□ -1.89
CHD9-213ENST00000564845 C7orf26Q96N11 449 aa3.21□□□□□ -1.89
CHD9-213ENST00000564845 ZNF558Q96NG5 402 aa3.21□□□□□ -1.89
CHD9-213ENST00000564845 ABCB9Q9NP78 766 aa3.21□□□□□ -1.89
CHD9-213ENST00000564845 TMEM74BQ9NUR3 256 aa3.21□□□□□ -1.89
CHD9-213ENST00000564845 CLN6Q9NWW5 311 aa3.21□□□□□ -1.89
CHD9-213ENST00000564845 TCAF1Q9Y4C2 921 aa3.21□□□□□ -1.89
CHD9-213ENST00000564845 FBP2O00757 339 aa3.21□□□□□ -1.89
CHD9-213ENST00000564845 RGS10O43665 173 aa3.21□□□□□ -1.89
CHD9-213ENST00000564845 BPIP17213 487 aa3.21□□□□□ -1.89
CHD9-213ENST00000564845 TLE3Q04726 772 aa3.21□□□□□ -1.89
CHD9-213ENST00000564845 LPAL2Q16609 132 aa3.21□□□□□ -1.89
CHD9-213ENST00000564845 ZNF311Q5JNZ3 666 aa3.21□□□□□ -1.89
CHD9-213ENST00000564845 LIPIQ6XZB0 460 aa3.21□□□□□ -1.89
CHD9-213ENST00000564845 USP43Q70EL4 1123 aa3.21□□□□□ -1.89
CHD9-213ENST00000564845 NLGN4XQ8N0W4 816 aa3.21□□□□□ -1.89
CHD9-213ENST00000564845 FBXO39Q8N4B4 442 aa3.21□□□□□ -1.89
CHD9-213ENST00000564845 FNDC5Q8NAU1 212 aa3.21□□□□□ -1.89
CHD9-213ENST00000564845 MCFD2Q8NI22 146 aa3.21□□□□□ -1.89
CHD9-213ENST00000564845 FAM216AQ8WUB2 273 aa3.21□□□□□ -1.89
CHD9-213ENST00000564845 KIAA1143Q96AT1 154 aaPredicted RBP3.21□□□□□ -1.89
CHD9-213ENST00000564845 RAD51AP1Q96B01 352 aa3.21□□□□□ -1.89
CHD9-213ENST00000564845 PKP4Q99569 1192 aa3.21□□□□□ -1.89
CHD9-213ENST00000564845 SPNS1Q9H2V7 528 aa3.21□□□□□ -1.89
CHD9-213ENST00000564845 NKX2-4Q9H2Z4 354 aa3.21□□□□□ -1.89
CHD9-213ENST00000564845 ZMAT5Q9UDW3 170 aaKnown RBP3.21□□□□□ -1.89
CHD9-213ENST00000564845 TAGLN3Q9UI15 199 aa3.21□□□□□ -1.89
CHD9-213ENST00000564845 CNOT6Q9ULM6 557 aaKnown RBP3.21□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms