RNA–Protein interactions for RNA: ENST00000564815.5

COMMD4-211, Transcript of COMM domain containing 4, humanhuman

TSL 3 BASIC

Gene COMMD4, Length 639 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-211ENST00000564815 TXNDC16Q9P2K2 825 aa13.16□□□□□ -0.3
COMMD4-211ENST00000564815 B4GALT7Q9UBV7 327 aa13.16□□□□□ -0.3
COMMD4-211ENST00000564815 BOKQ9UMX3 212 aaPredicted RBP13.16□□□□□ -0.3
COMMD4-211ENST00000564815 CLDN16Q9Y5I7 305 aa13.16□□□□□ -0.3
COMMD4-211ENST00000564815 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.16□□□□□ -0.3
COMMD4-211ENST00000564815 HCFC1P51610 2035 aa13.16□□□□□ -0.3
COMMD4-211ENST00000564815 SETD2Q9BYW2 2564 aaPredicted RBP13.16□□□□□ -0.3
COMMD4-211ENST00000564815 CELSR1Q9NYQ6 3014 aa13.15□□□□□ -0.3
COMMD4-211ENST00000564815 HSPB2A8KAH6 182 aa13.15□□□□□ -0.3
COMMD4-211ENST00000564815 TGFBR3LH3BV60 316 aa13.15□□□□□ -0.3
COMMD4-211ENST00000564815 ZSCAN12O43309 604 aa13.15□□□□□ -0.3
COMMD4-211ENST00000564815 CERS1P27544 350 aa13.15□□□□□ -0.3
COMMD4-211ENST00000564815 TLX1P31314 330 aaPredicted RBP13.15□□□□□ -0.3
COMMD4-211ENST00000564815 GGT5P36269 586 aa13.15□□□□□ -0.3
COMMD4-211ENST00000564815 MAGEA5P43359 124 aa13.15□□□□□ -0.3
COMMD4-211ENST00000564815 KIR2DL3P43628 341 aa13.15□□□□□ -0.3
COMMD4-211ENST00000564815 IST1P53990 364 aa13.15□□□□□ -0.3
COMMD4-211ENST00000564815 POU4F1Q01851 419 aa13.15□□□□□ -0.3
COMMD4-211ENST00000564815 IRF8Q02556 426 aa13.15□□□□□ -0.3
COMMD4-211ENST00000564815 SF3B4Q15427 424 aaKnown RBP eCLIP13.15□□□□□ -0.33e-6■■■■■ 28.5
COMMD4-211ENST00000564815 HSPB2Q16082 182 aa13.15□□□□□ -0.3
COMMD4-211ENST00000564815 PDK4Q16654 411 aa13.15□□□□□ -0.3
COMMD4-211ENST00000564815 TMEM35AQ53FP2 167 aa13.15□□□□□ -0.3
COMMD4-211ENST00000564815 PIGGQ5H8A4 983 aa13.15□□□□□ -0.3
COMMD4-211ENST00000564815 C1orf185Q5T7R7 199 aa13.15□□□□□ -0.3
COMMD4-211ENST00000564815 GOT1L1Q8NHS2 421 aaPredicted RBP13.15□□□□□ -0.3
COMMD4-211ENST00000564815 SLC2A12Q8TD20 617 aa13.15□□□□□ -0.3
COMMD4-211ENST00000564815 ART5Q96L15 291 aa13.15□□□□□ -0.3
COMMD4-211ENST00000564815 DGAT2Q96PD7 388 aa13.15□□□□□ -0.3
COMMD4-211ENST00000564815 F2RL3Q96RI0 385 aa13.15□□□□□ -0.3
COMMD4-211ENST00000564815 CENPKQ9BS16 269 aa13.15□□□□□ -0.3
COMMD4-211ENST00000564815 POLDIP3Q9BY77 421 aaKnown RBP13.15□□□□□ -0.3
COMMD4-211ENST00000564815 PHACTR1Q9C0D0 580 aa13.15□□□□□ -0.3
COMMD4-211ENST00000564815 RHOJQ9H4E5 214 aa13.15□□□□□ -0.3
COMMD4-211ENST00000564815 PRDM7Q9NQW5 492 aa13.15□□□□□ -0.3
COMMD4-211ENST00000564815 MS4A12Q9NXJ0 267 aa13.15□□□□□ -0.3
COMMD4-211ENST00000564815 CNIH4Q9P003 139 aa13.15□□□□□ -0.3
COMMD4-211ENST00000564815 SNX12Q9UMY4 172 aa13.15□□□□□ -0.3
COMMD4-211ENST00000564815 PCDHGB3Q9Y5G1 929 aa13.15□□□□□ -0.3
COMMD4-211ENST00000564815 A0A0G2JNJ9 132 aa13.14□□□□□ -0.31
COMMD4-211ENST00000564815 MYOCOSA0A1B0GUC4 107 aa13.14□□□□□ -0.31
COMMD4-211ENST00000564815 TCP1P17987 556 aaKnown RBP13.14□□□□□ -0.31
COMMD4-211ENST00000564815 CPN2P22792 545 aa13.14□□□□□ -0.31
COMMD4-211ENST00000564815 DNASE1P24855 282 aa13.14□□□□□ -0.31
COMMD4-211ENST00000564815 IVDP26440 423 aa13.14□□□□□ -0.31
COMMD4-211ENST00000564815 SERPINB3P29508 390 aa13.14□□□□□ -0.31
COMMD4-211ENST00000564815 SERPINB1P30740 379 aa13.14□□□□□ -0.31
COMMD4-211ENST00000564815 ATP6V0D1P61421 351 aa13.14□□□□□ -0.31
COMMD4-211ENST00000564815 ASPHQ12797 758 aa13.14□□□□□ -0.31
COMMD4-211ENST00000564815 PDIA2Q13087 525 aaKnown RBP13.14□□□□□ -0.31
COMMD4-211ENST00000564815 DOC2AQ14183 400 aa13.14□□□□□ -0.31
COMMD4-211ENST00000564815 ZNF460Q14592 562 aa13.14□□□□□ -0.31
COMMD4-211ENST00000564815 TBCCQ15814 346 aa13.14□□□□□ -0.31
COMMD4-211ENST00000564815 C18orf21Q32NC0 220 aaPredicted RBP13.14□□□□□ -0.31
COMMD4-211ENST00000564815 RIPPLY2Q5TAB7 128 aa13.14□□□□□ -0.31
COMMD4-211ENST00000564815 WDR53Q7Z5U6 358 aaPredicted RBP13.14□□□□□ -0.31
COMMD4-211ENST00000564815 ANKMY2Q8IV38 441 aa13.14□□□□□ -0.31
COMMD4-211ENST00000564815 SLC35F6Q8N357 371 aa13.14□□□□□ -0.31
COMMD4-211ENST00000564815 LIX1Q8N485 282 aa13.14□□□□□ -0.31
COMMD4-211ENST00000564815 ACOT4Q8N9L9 421 aa13.14□□□□□ -0.31
COMMD4-211ENST00000564815 NUBPLQ8TB37 319 aa13.14□□□□□ -0.31
COMMD4-211ENST00000564815 ANKRD49Q8WVL7 239 aa13.14□□□□□ -0.31
COMMD4-211ENST00000564815 SREK1Q8WXA9 508 aaKnown RBP13.14□□□□□ -0.31
COMMD4-211ENST00000564815 CDKL2Q92772 493 aa13.14□□□□□ -0.31
COMMD4-211ENST00000564815 WDR34Q96EX3 536 aa13.14□□□□□ -0.31
COMMD4-211ENST00000564815 SENP5Q96HI0 755 aaPredicted RBP13.14□□□□□ -0.31
COMMD4-211ENST00000564815 CSF3RQ99062 836 aa13.14□□□□□ -0.31
COMMD4-211ENST00000564815 TUBA8Q9NY65 449 aaPredicted RBP13.14□□□□□ -0.31
COMMD4-211ENST00000564815 MOCS1Q9NZB8 636 aa13.14□□□□□ -0.31
COMMD4-211ENST00000564815 CD274Q9NZQ7 290 aa13.14□□□□□ -0.31
COMMD4-211ENST00000564815 Q9UFV3 132 aa13.14□□□□□ -0.31
COMMD4-211ENST00000564815 ADGRE2Q9UHX3 823 aa13.14□□□□□ -0.31
COMMD4-211ENST00000564815 ZNF490Q9ULM2 529 aaPredicted RBP13.14□□□□□ -0.31
COMMD4-211ENST00000564815 PSAT1Q9Y617 370 aa13.14□□□□□ -0.31
COMMD4-211ENST00000564815 IQANK1A0A1B0GTG1 560 aa13.13□□□□□ -0.31
COMMD4-211ENST00000564815 CCNT2O60583 730 aaKnown RBP13.13□□□□□ -0.31
COMMD4-211ENST00000564815 DIAPH2O60879 1101 aa13.13□□□□□ -0.31
COMMD4-211ENST00000564815 LDB3O75112 727 aa13.13□□□□□ -0.31
COMMD4-211ENST00000564815 CTAG2O75638 210 aa13.13□□□□□ -0.31
COMMD4-211ENST00000564815 CCDC166P0CW27 439 aa13.13□□□□□ -0.31
COMMD4-211ENST00000564815 ATP5A1P25705 553 aaKnown RBP13.13□□□□□ -0.31
COMMD4-211ENST00000564815 MSH2P43246 934 aa13.13□□□□□ -0.31
COMMD4-211ENST00000564815 HSPA7P48741 367 aa13.13□□□□□ -0.31
COMMD4-211ENST00000564815 DNASE1L1P49184 302 aa13.13□□□□□ -0.31
COMMD4-211ENST00000564815 KCNJ2P63252 427 aa13.13□□□□□ -0.31
COMMD4-211ENST00000564815 DR1Q01658 176 aa13.13□□□□□ -0.31
COMMD4-211ENST00000564815 FOXO1Q12778 655 aa13.13□□□□□ -0.31
COMMD4-211ENST00000564815 CHIT1Q13231 466 aa13.13□□□□□ -0.31
COMMD4-211ENST00000564815 FBXW8Q8N3Y1 598 aa13.13□□□□□ -0.31
COMMD4-211ENST00000564815 FBXO36Q8NEA4 188 aa13.13□□□□□ -0.31
COMMD4-211ENST00000564815 TANKQ92844 425 aa13.13□□□□□ -0.31
COMMD4-211ENST00000564815 CAPZA3Q96KX2 299 aa13.13□□□□□ -0.31
COMMD4-211ENST00000564815 MAPKAP1Q9BPZ7 522 aa13.13□□□□□ -0.31
COMMD4-211ENST00000564815 TMUB1Q9BVT8 246 aa13.13□□□□□ -0.31
COMMD4-211ENST00000564815 PLAC1Q9HBJ0 212 aa13.13□□□□□ -0.31
COMMD4-211ENST00000564815 ZFP64Q9NPA5 681 aa13.13□□□□□ -0.31
COMMD4-211ENST00000564815 QPCTLQ9NXS2 382 aa13.13□□□□□ -0.31
COMMD4-211ENST00000564815 L3MBTL1Q9Y468 752 aa13.13□□□□□ -0.31
COMMD4-211ENST00000564815 ATG4BQ9Y4P1 393 aa13.13□□□□□ -0.31
COMMD4-211ENST00000564815 FAM215AQ9Y5M1 114 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms