RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 FNDC11Q9BVV2 318 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 OR2B2Q9GZK3 357 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 POLR2J2Q9GZM3 115 aaKnown RBP7.29□□□□□ -1.24
ATXN3-249ENST00000564606 ROGDIQ9GZN7 287 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 POLR2J3Q9H1A7 115 aaKnown RBP7.29□□□□□ -1.24
ATXN3-249ENST00000564606 RHBGQ9H310 441 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 RC3H2Q9HBD1 1191 aaKnown RBP7.29□□□□□ -1.24
ATXN3-249ENST00000564606 ZNF334Q9HCZ1 680 aaPredicted RBP7.29□□□□□ -1.24
ATXN3-249ENST00000564606 DIABLOQ9NR28 239 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 MS4A12Q9NXJ0 267 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 RABL2AQ9UBK7 228 aaPredicted RBP7.29□□□□□ -1.24
ATXN3-249ENST00000564606 SEC14L3Q9UDX4 400 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 KCND3Q9UK17 655 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 ACSL5Q9ULC5 683 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 RABL2BQ9UNT1 228 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 DOLKQ9UPQ8 538 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 ERVK-11Q9UQG0 969 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 LIPT1Q9Y234 373 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 EXOSC1Q9Y3B2 195 aaKnown RBP7.29□□□□□ -1.24
ATXN3-249ENST00000564606 PCDHGB2Q9Y5G2 931 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 PCDHGA3Q9Y5H0 932 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 CORINQ9Y5Q5 1042 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 IRAK3Q9Y616 596 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 SCN8AQ9UQD0 1980 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 COL4A6Q14031 1691 aa7.28□□□□□ -1.24
ATXN3-249ENST00000564606 A0A0G2JPF8 293 aa7.28□□□□□ -1.24
ATXN3-249ENST00000564606 LOC100506127A0A0U1RQW1 187 aa7.28□□□□□ -1.24
ATXN3-249ENST00000564606 IQCMA0A1B0GVH7 501 aa7.28□□□□□ -1.24
ATXN3-249ENST00000564606 A0A1W2PRU2 124 aa7.28□□□□□ -1.24
ATXN3-249ENST00000564606 HTR3EA5X5Y0 456 aa7.28□□□□□ -1.24
ATXN3-249ENST00000564606 FAM172BPA6NC97 362 aa7.28□□□□□ -1.24
ATXN3-249ENST00000564606 OR2AG2A6NM03 316 aa7.28□□□□□ -1.24
ATXN3-249ENST00000564606 HNRNPCL2B2RXH8 293 aa7.28□□□□□ -1.24
ATXN3-249ENST00000564606 HNRNPCL3B7ZW38 293 aa7.28□□□□□ -1.24
ATXN3-249ENST00000564606 H3BN98 237 aa7.28□□□□□ -1.24
ATXN3-249ENST00000564606 BOLA2-SMG1P6H3BVE0 249 aa7.28□□□□□ -1.24
ATXN3-249ENST00000564606 SLC30A4O14863 429 aa7.28□□□□□ -1.24
ATXN3-249ENST00000564606 GPR39O43194 453 aa7.28□□□□□ -1.24
ATXN3-249ENST00000564606 SIAH2O43255 324 aa7.28□□□□□ -1.24
ATXN3-249ENST00000564606 TGM5O43548 720 aa7.28□□□□□ -1.24
ATXN3-249ENST00000564606 OR10H3O60404 316 aa7.28□□□□□ -1.24
ATXN3-249ENST00000564606 FOXD2O60548 495 aaPredicted RBP7.28□□□□□ -1.24
ATXN3-249ENST00000564606 COQ9O75208 318 aa7.28□□□□□ -1.24
ATXN3-249ENST00000564606 NFATC1O95644 943 aa7.28□□□□□ -1.24
ATXN3-249ENST00000564606 CXCL14O95715 111 aa7.28□□□□□ -1.24
ATXN3-249ENST00000564606 RAB36O95755 333 aa7.28□□□□□ -1.24
ATXN3-249ENST00000564606 LCKP06239 509 aa7.28□□□□□ -1.24
ATXN3-249ENST00000564606 HSMCR30P0CW71 290 aa7.28□□□□□ -1.24
ATXN3-249ENST00000564606 HNRNPCL4P0DMR1 293 aa7.28□□□□□ -1.24
ATXN3-249ENST00000564606 GAAP10253 952 aa7.28□□□□□ -1.24
ATXN3-249ENST00000564606 CKMT1AP12532 417 aa7.28□□□□□ -1.24
ATXN3-249ENST00000564606 HLA-EP13747 358 aa7.28□□□□□ -1.24
ATXN3-249ENST00000564606 TIMP2P16035 220 aa7.28□□□□□ -1.24
ATXN3-249ENST00000564606 GALP22466 123 aa7.28□□□□□ -1.24
ATXN3-249ENST00000564606 CBLP22681 906 aa7.28□□□□□ -1.24
ATXN3-249ENST00000564606 CHMP24386 653 aa7.28□□□□□ -1.24
ATXN3-249ENST00000564606 TEAD1P28347 426 aa7.28□□□□□ -1.24
ATXN3-249ENST00000564606 ALDH4A1P30038 563 aa7.28□□□□□ -1.24
ATXN3-249ENST00000564606 WEE1P30291 646 aa7.28□□□□□ -1.24
ATXN3-249ENST00000564606 SDC2P34741 201 aa7.28□□□□□ -1.24
ATXN3-249ENST00000564606 GSSP48637 474 aa7.28□□□□□ -1.24
ATXN3-249ENST00000564606 MASP1P48740 699 aa7.28□□□□□ -1.24
ATXN3-249ENST00000564606 XKP51811 444 aa7.28□□□□□ -1.24
ATXN3-249ENST00000564606 TAS2R50P59544 299 aa7.28□□□□□ -1.24
ATXN3-249ENST00000564606 WDR5P61964 334 aaKnown RBP7.28□□□□□ -1.24
ATXN3-249ENST00000564606 HBA1P69905 142 aa7.28□□□□□ -1.24
ATXN3-249ENST00000564606 ABATP80404 500 aa7.28□□□□□ -1.24
ATXN3-249ENST00000564606 PRR5P85299 388 aa7.28□□□□□ -1.24
ATXN3-249ENST00000564606 RAB40BQ12829 278 aa7.28□□□□□ -1.24
ATXN3-249ENST00000564606 PTGES3Q15185 160 aaKnown RBP7.28□□□□□ -1.24
ATXN3-249ENST00000564606 SPHARQ15513 63 aa7.28□□□□□ -1.24
ATXN3-249ENST00000564606 PDZK1Q5T2W1 519 aa7.28□□□□□ -1.24
ATXN3-249ENST00000564606 DEPDC1Q5TB30 811 aa7.28□□□□□ -1.24
ATXN3-249ENST00000564606 KHDRBS2Q5VWX1 349 aaKnown RBP7.28□□□□□ -1.24
ATXN3-249ENST00000564606 SAXO2Q658L1 398 aa7.28□□□□□ -1.24
ATXN3-249ENST00000564606 MZT2BQ6NZ67 158 aa7.28□□□□□ -1.24
ATXN3-249ENST00000564606 CEACAM20Q6UY09 585 aa7.28□□□□□ -1.24
ATXN3-249ENST00000564606 LIPIQ6XZB0 460 aa7.28□□□□□ -1.24
ATXN3-249ENST00000564606 TMEM64Q6YI46 380 aa7.28□□□□□ -1.24
ATXN3-249ENST00000564606 TMPRSS11AQ6ZMR5 421 aa7.28□□□□□ -1.24
ATXN3-249ENST00000564606 FAM83HQ6ZRV2 1179 aaPredicted RBP7.28□□□□□ -1.24
ATXN3-249ENST00000564606 Q6ZVL8 140 aa7.28□□□□□ -1.24
ATXN3-249ENST00000564606 GAREM2Q75VX8 874 aa7.28□□□□□ -1.24
ATXN3-249ENST00000564606 HSD11B1LQ7Z5J1 315 aa7.28□□□□□ -1.24
ATXN3-249ENST00000564606 DEFB128Q7Z7B8 93 aa7.28□□□□□ -1.24
ATXN3-249ENST00000564606 RAB43Q86YS6 212 aa7.28□□□□□ -1.24
ATXN3-249ENST00000564606 TMC8Q8IU68 726 aa7.28□□□□□ -1.24
ATXN3-249ENST00000564606 CFAP206Q8IYR0 622 aa7.28□□□□□ -1.24
ATXN3-249ENST00000564606 CELF5Q8N6W0 485 aaKnown RBP7.28□□□□□ -1.24
ATXN3-249ENST00000564606 RASGEF1AQ8N9B8 481 aa7.28□□□□□ -1.24
ATXN3-249ENST00000564606 AQP11Q8NBQ7 271 aa7.28□□□□□ -1.24
ATXN3-249ENST00000564606 B3GNT7Q8NFL0 401 aa7.28□□□□□ -1.24
ATXN3-249ENST00000564606 GPR156Q8NFN8 814 aa7.28□□□□□ -1.24
ATXN3-249ENST00000564606 OR56A1Q8NGH5 318 aa7.28□□□□□ -1.24
ATXN3-249ENST00000564606 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.28□□□□□ -1.24
ATXN3-249ENST00000564606 CD99L2Q8TCZ2 262 aa7.28□□□□□ -1.24
ATXN3-249ENST00000564606 ZNF480Q8WV37 535 aa7.28□□□□□ -1.24
ATXN3-249ENST00000564606 BHMTQ93088 406 aa7.28□□□□□ -1.24
ATXN3-249ENST00000564606 NEIL2Q969S2 332 aa7.28□□□□□ -1.24
ATXN3-249ENST00000564606 CHFRQ96EP1 664 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms