RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 PHF3Q92576 2039 aaKnown RBP13.94□□□□□ -0.18
SPG7-210ENST00000564409 TANKQ92844 425 aa13.94□□□□□ -0.18
SPG7-210ENST00000564409 MTFMTQ96DP5 389 aaKnown RBP13.94□□□□□ -0.18
SPG7-210ENST00000564409 ART5Q96L15 291 aa13.94□□□□□ -0.18
SPG7-210ENST00000564409 PHF12Q96QT6 1004 aa13.94□□□□□ -0.18
SPG7-210ENST00000564409 DMRTA2Q96SC8 542 aa13.94□□□□□ -0.18
SPG7-210ENST00000564409 CSF3RQ99062 836 aa13.94□□□□□ -0.18
SPG7-210ENST00000564409 MAPKAP1Q9BPZ7 522 aa13.94□□□□□ -0.18
SPG7-210ENST00000564409 PRM3Q9NNZ6 103 aa13.94□□□□□ -0.18
SPG7-210ENST00000564409 PSD3Q9NYI0 1048 aa13.94□□□□□ -0.18
SPG7-210ENST00000564409 PHF11Q9UIL8 331 aa13.94□□□□□ -0.18
SPG7-210ENST00000564409 ANGPTL3Q9Y5C1 460 aa13.94□□□□□ -0.18
SPG7-210ENST00000564409 TNPO3Q9Y5L0 923 aaKnown RBP13.94□□□□□ -0.18
SPG7-210ENST00000564409 C17orf105B2RV13 164 aa13.93□□□□□ -0.18
SPG7-210ENST00000564409 UBXN8O00124 270 aa13.93□□□□□ -0.18
SPG7-210ENST00000564409 ACOT7O00154 380 aa13.93□□□□□ -0.18
SPG7-210ENST00000564409 FAM155BO75949 473 aa13.93□□□□□ -0.18
SPG7-210ENST00000564409 MTHFD2P13995 350 aa13.93□□□□□ -0.18
SPG7-210ENST00000564409 PRF1P14222 555 aa13.93□□□□□ -0.18
SPG7-210ENST00000564409 CPN2P22792 545 aa13.93□□□□□ -0.18
SPG7-210ENST00000564409 PTX3P26022 381 aaPredicted RBP13.93□□□□□ -0.18
SPG7-210ENST00000564409 GRNP28799 593 aaKnown RBP13.93□□□□□ -0.18
SPG7-210ENST00000564409 ALDH18A1P54886 795 aaKnown RBP13.93□□□□□ -0.18
SPG7-210ENST00000564409 RNF4P78317 190 aa13.93□□□□□ -0.18
SPG7-210ENST00000564409 TBL3Q12788 808 aaKnown RBP13.93□□□□□ -0.18
SPG7-210ENST00000564409 SETDB1Q15047 1291 aa13.93□□□□□ -0.18
SPG7-210ENST00000564409 MPEG1Q2M385 716 aa13.93□□□□□ -0.18
SPG7-210ENST00000564409 CMPK2Q5EBM0 449 aa13.93□□□□□ -0.18
SPG7-210ENST00000564409 NDUFAF5Q5TEU4 345 aa13.93□□□□□ -0.18
SPG7-210ENST00000564409 SYT10Q6XYQ8 523 aa13.93□□□□□ -0.18
SPG7-210ENST00000564409 ZNF793Q6ZN11 406 aa13.93□□□□□ -0.18
SPG7-210ENST00000564409 RTL4Q6ZR62 310 aa13.93□□□□□ -0.18
SPG7-210ENST00000564409 GK5Q6ZS86 529 aa13.93□□□□□ -0.18
SPG7-210ENST00000564409 MDGA2Q7Z553 956 aa13.93□□□□□ -0.18
SPG7-210ENST00000564409 SRRM1Q8IYB3 904 aaKnown RBP13.93□□□□□ -0.18
SPG7-210ENST00000564409 ZCCHC7Q8N3Z6 543 aaKnown RBP13.93□□□□□ -0.18
SPG7-210ENST00000564409 SLC2A12Q8TD20 617 aa13.93□□□□□ -0.18
SPG7-210ENST00000564409 NXNL1Q96CM4 212 aa13.93□□□□□ -0.18
SPG7-210ENST00000564409 RBM18Q96H35 190 aaKnown RBP13.93□□□□□ -0.18
SPG7-210ENST00000564409 RASL10BQ96S79 203 aa13.93□□□□□ -0.18
SPG7-210ENST00000564409 PELOQ9BRX2 385 aaKnown RBP13.93□□□□□ -0.18
SPG7-210ENST00000564409 OR8D2Q9GZM6 311 aa13.93□□□□□ -0.18
SPG7-210ENST00000564409 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.93□□□□□ -0.18
SPG7-210ENST00000564409 COQ3Q9NZJ6 369 aa13.93□□□□□ -0.18
SPG7-210ENST00000564409 H0YIV9 168 aa13.92□□□□□ -0.18
SPG7-210ENST00000564409 HS6ST1O60243 411 aa13.92□□□□□ -0.18
SPG7-210ENST00000564409 KLK8O60259 260 aa13.92□□□□□ -0.18
SPG7-210ENST00000564409 PRKNO60260 465 aaPredicted RBP13.92□□□□□ -0.18
SPG7-210ENST00000564409 LDB3O75112 727 aa13.92□□□□□ -0.18
SPG7-210ENST00000564409 KLHL2O95198 593 aa13.92□□□□□ -0.18
SPG7-210ENST00000564409 TGFB1P01137 390 aa13.92□□□□□ -0.18
SPG7-210ENST00000564409 C2P06681 752 aa13.92□□□□□ -0.18
SPG7-210ENST00000564409 PTGER1P34995 402 aa13.92□□□□□ -0.18
SPG7-210ENST00000564409 STT3AP46977 705 aa13.92□□□□□ -0.18
SPG7-210ENST00000564409 RAP1GDS1P52306 607 aa13.92□□□□□ -0.18
SPG7-210ENST00000564409 HK2P52789 917 aa13.92□□□□□ -0.18
SPG7-210ENST00000564409 PCBP2Q15366 365 aaKnown RBP eCLIP13.92□□□□□ -0.18
SPG7-210ENST00000564409 C10orf62Q5T681 223 aaPredicted RBP13.92□□□□□ -0.18
SPG7-210ENST00000564409 C8orf74Q6P047 294 aa13.92□□□□□ -0.18
SPG7-210ENST00000564409 IL20RBQ6UXL0 311 aa13.92□□□□□ -0.18
SPG7-210ENST00000564409 FGD2Q7Z6J4 655 aa13.92□□□□□ -0.18
SPG7-210ENST00000564409 GPR180Q86V85 440 aa13.92□□□□□ -0.18
SPG7-210ENST00000564409 SLC22A16Q86VW1 577 aa13.92□□□□□ -0.18
SPG7-210ENST00000564409 RELL1Q8IUW5 271 aa13.92□□□□□ -0.18
SPG7-210ENST00000564409 DND1Q8IYX4 353 aaKnown RBP13.92□□□□□ -0.18
SPG7-210ENST00000564409 CENPLQ8N0S6 344 aaPredicted RBP13.92□□□□□ -0.18
SPG7-210ENST00000564409 SLC15A4Q8N697 577 aa13.92□□□□□ -0.18
SPG7-210ENST00000564409 TEX9Q8N6V9 391 aa13.92□□□□□ -0.18
SPG7-210ENST00000564409 HUS1BQ8NHY5 278 aa13.92□□□□□ -0.18
SPG7-210ENST00000564409 NUBPLQ8TB37 319 aa13.92□□□□□ -0.18
SPG7-210ENST00000564409 ANKRD9Q96BM1 317 aaPredicted RBP13.92□□□□□ -0.18
SPG7-210ENST00000564409 TP63Q9H3D4 680 aaPredicted RBP13.92□□□□□ -0.18
SPG7-210ENST00000564409 RPF2Q9H7B2 306 aaKnown RBP13.92□□□□□ -0.18
SPG7-210ENST00000564409 TMCO1Q9UM00 188 aa13.92□□□□□ -0.18
SPG7-210ENST00000564409 PPT2Q9UMR5 302 aa13.92□□□□□ -0.18
SPG7-210ENST00000564409 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.92□□□□□ -0.18
SPG7-210ENST00000564409 APCP25054 2843 aa13.91□□□□□ -0.18
SPG7-210ENST00000564409 A0A1B0GTH9 108 aa13.91□□□□□ -0.18
SPG7-210ENST00000564409 OR14I1A6ND48 311 aa13.91□□□□□ -0.18
SPG7-210ENST00000564409 WWP2O00308 870 aa13.91□□□□□ -0.18
SPG7-210ENST00000564409 RTCAO00442 366 aaKnown RBP13.91□□□□□ -0.18
SPG7-210ENST00000564409 ADAM10O14672 748 aa13.91□□□□□ -0.18
SPG7-210ENST00000564409 OR6B1O95007 311 aa13.91□□□□□ -0.18
SPG7-210ENST00000564409 GFAPP14136 432 aa13.91□□□□□ -0.18
SPG7-210ENST00000564409 CNR1P21554 472 aa13.91□□□□□ -0.18
SPG7-210ENST00000564409 ELAVL4P26378 380 aaKnown RBP13.91□□□□□ -0.18
SPG7-210ENST00000564409 TYK2P29597 1187 aa13.91□□□□□ -0.18
SPG7-210ENST00000564409 BUD31P41223 144 aaPredicted RBP13.91□□□□□ -0.18
SPG7-210ENST00000564409 SOX3P41225 446 aa13.91□□□□□ -0.18
SPG7-210ENST00000564409 SERPINB8P50452 374 aa13.91□□□□□ -0.18
SPG7-210ENST00000564409 PPIAP62937 165 aaKnown RBP13.91□□□□□ -0.18
SPG7-210ENST00000564409 HSF1Q00613 529 aa13.91□□□□□ -0.18
SPG7-210ENST00000564409 PLIN5Q00G26 463 aa13.91□□□□□ -0.18
SPG7-210ENST00000564409 SLAMF1Q13291 335 aa13.91□□□□□ -0.18
SPG7-210ENST00000564409 CUL3Q13618 768 aa13.91□□□□□ -0.18
SPG7-210ENST00000564409 TRADDQ15628 312 aa13.91□□□□□ -0.18
SPG7-210ENST00000564409 MROH9Q5TGP6 573 aa13.91□□□□□ -0.18
SPG7-210ENST00000564409 OR2M7Q8NG81 312 aa13.91□□□□□ -0.18
SPG7-210ENST00000564409 ZNF721Q8TF20 911 aa13.91□□□□□ -0.18
SPG7-210ENST00000564409 CA5BP1Q8WTZ4 195 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms