RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 TIMMDC1Q9NPL8 285 aa16.44■□□□□ 0.22
NME3-205ENST00000563854 HPF1Q9NWY4 346 aa16.44■□□□□ 0.22
NME3-205ENST00000563854 PPIEQ9UNP9 301 aaKnown RBP16.44■□□□□ 0.22
NME3-205ENST00000563854 YARS2Q9Y2Z4 477 aaKnown RBP16.44■□□□□ 0.22
NME3-205ENST00000563854 IKBKGQ9Y6K9 419 aa16.44■□□□□ 0.22
NME3-205ENST00000563854 HS6ST1O60243 411 aa16.43■□□□□ 0.22
NME3-205ENST00000563854 FGF17O60258 216 aa16.43■□□□□ 0.22
NME3-205ENST00000563854 PRKRAO75569 313 aaKnown RBP16.43■□□□□ 0.22
NME3-205ENST00000563854 OR6B1O95007 311 aa16.43■□□□□ 0.22
NME3-205ENST00000563854 GRNP28799 593 aaKnown RBP16.43■□□□□ 0.22
NME3-205ENST00000563854 PIK3CGP48736 1102 aa16.43■□□□□ 0.22
NME3-205ENST00000563854 CPSF6Q16630 551 aaKnown RBP eCLIP16.43■□□□□ 0.22
NME3-205ENST00000563854 TECRLQ5HYJ1 363 aa16.43■□□□□ 0.22
NME3-205ENST00000563854 DEPDC1Q5TB30 811 aa16.43■□□□□ 0.22
NME3-205ENST00000563854 C3P1Q6ZMU1 363 aa16.43■□□□□ 0.22
NME3-205ENST00000563854 TAOK1Q7L7X3 1001 aa16.43■□□□□ 0.22
NME3-205ENST00000563854 SLC34A3Q8N130 599 aa16.43■□□□□ 0.22
NME3-205ENST00000563854 PLD6Q8N2A8 252 aaKnown RBP16.43■□□□□ 0.22
NME3-205ENST00000563854 POGLUT1Q8NBL1 392 aa16.43■□□□□ 0.22
NME3-205ENST00000563854 MORN4Q8NDC4 146 aa16.43■□□□□ 0.22
NME3-205ENST00000563854 SLC2A12Q8TD20 617 aa16.43■□□□□ 0.22
NME3-205ENST00000563854 DGAT2Q96PD7 388 aa16.43■□□□□ 0.22
NME3-205ENST00000563854 FMO2Q99518 471 aa16.43■□□□□ 0.22
NME3-205ENST00000563854 IPPKQ9H8X2 491 aa16.43■□□□□ 0.22
NME3-205ENST00000563854 ZNF358Q9NW07 568 aa16.43■□□□□ 0.22
NME3-205ENST00000563854 MYOTQ9UBF9 498 aa16.43■□□□□ 0.22
NME3-205ENST00000563854 COPS7AQ9UBW8 275 aa16.43■□□□□ 0.22
NME3-205ENST00000563854 VTI1BQ9UEU0 232 aa16.43■□□□□ 0.22
NME3-205ENST00000563854 ADGRE2Q9UHX3 823 aa16.43■□□□□ 0.22
NME3-205ENST00000563854 DMGDHQ9UI17 866 aaKnown RBP16.43■□□□□ 0.22
NME3-205ENST00000563854 ENTPD4Q9Y227 616 aa16.43■□□□□ 0.22
NME3-205ENST00000563854 ZNF835Q9Y2P0 537 aa16.43■□□□□ 0.22
NME3-205ENST00000563854 PCDHGA11Q9Y5H2 935 aa16.43■□□□□ 0.22
NME3-205ENST00000563854 CENPEQ02224 2701 aa16.42■□□□□ 0.22
NME3-205ENST00000563854 MYO7BQ6PIF6 2116 aa16.42■□□□□ 0.22
NME3-205ENST00000563854 CELSR2Q9HCU4 2923 aa16.42■□□□□ 0.22
NME3-205ENST00000563854 POC1B-GALNT4F8VUJ3 575 aa16.42■□□□□ 0.22
NME3-205ENST00000563854 G3V3Y1 287 aa16.42■□□□□ 0.22
NME3-205ENST00000563854 PLPP1O14494 284 aa16.42■□□□□ 0.22
NME3-205ENST00000563854 HNRNPRO43390 633 aaKnown RBP16.42■□□□□ 0.22
NME3-205ENST00000563854 SCELO95171 688 aa16.42■□□□□ 0.22
NME3-205ENST00000563854 TUBB4AP04350 444 aa16.42■□□□□ 0.22
NME3-205ENST00000563854 COX7A2P14406 83 aa16.42■□□□□ 0.22
NME3-205ENST00000563854 SOX3P41225 446 aa16.42■□□□□ 0.22
NME3-205ENST00000563854 HK2P52789 917 aa16.42■□□□□ 0.22
NME3-205ENST00000563854 ADORA2A-AS1P86434 159 aa16.42■□□□□ 0.22
NME3-205ENST00000563854 PLGLB1Q02325 96 aa16.42■□□□□ 0.22
NME3-205ENST00000563854 ART3Q13508 389 aa16.42■□□□□ 0.22
NME3-205ENST00000563854 LIPJQ5W064 366 aa16.42■□□□□ 0.22
NME3-205ENST00000563854 C18orf63Q68DL7 685 aa16.42■□□□□ 0.22
NME3-205ENST00000563854 Q6ZPB1 254 aaPredicted RBP16.42■□□□□ 0.22
NME3-205ENST00000563854 MMGT1Q8N4V1 131 aa16.42■□□□□ 0.22
NME3-205ENST00000563854 PTGR2Q8N8N7 351 aaPredicted RBP16.42■□□□□ 0.22
NME3-205ENST00000563854 PSD4Q8NDX1 1056 aa16.42■□□□□ 0.22
NME3-205ENST00000563854 DOK4Q8TEW6 326 aa16.42■□□□□ 0.22
NME3-205ENST00000563854 AGAP11Q8TF27 550 aa16.42■□□□□ 0.22
NME3-205ENST00000563854 ATP6V1E2Q96A05 226 aa16.42■□□□□ 0.22
NME3-205ENST00000563854 ANKRD9Q96BM1 317 aaPredicted RBP16.42■□□□□ 0.22
NME3-205ENST00000563854 REPS1Q96D71 796 aa16.42■□□□□ 0.22
NME3-205ENST00000563854 PHF21BQ96EK2 531 aa16.42■□□□□ 0.22
NME3-205ENST00000563854 GPR78Q96P69 363 aa16.42■□□□□ 0.22
NME3-205ENST00000563854 CDK15Q96Q40 435 aa16.42■□□□□ 0.22
NME3-205ENST00000563854 RASL10BQ96S79 203 aa16.42■□□□□ 0.22
NME3-205ENST00000563854 PAFAH2Q99487 392 aa16.42■□□□□ 0.22
NME3-205ENST00000563854 RPF2Q9H7B2 306 aaKnown RBP16.42■□□□□ 0.22
NME3-205ENST00000563854 PHF11Q9UIL8 331 aa16.42■□□□□ 0.22
NME3-205ENST00000563854 RNF11Q9Y3C5 154 aa16.42■□□□□ 0.22
NME3-205ENST00000563854 CCDC189A1A4V9 331 aa16.41■□□□□ 0.22
NME3-205ENST00000563854 TMEM200CA6NKL6 621 aa16.41■□□□□ 0.22
NME3-205ENST00000563854 PRRG2O14669 202 aa16.41■□□□□ 0.22
NME3-205ENST00000563854 PDE9AO76083 593 aa16.41■□□□□ 0.22
NME3-205ENST00000563854 ETHE1O95571 254 aa16.41■□□□□ 0.22
NME3-205ENST00000563854 SNRPB2P08579 225 aaKnown RBP16.41■□□□□ 0.22
NME3-205ENST00000563854 HTR1EP28566 365 aa16.41■□□□□ 0.22
NME3-205ENST00000563854 PIK3CBP42338 1070 aa16.41■□□□□ 0.22
NME3-205ENST00000563854 NEK2P51955 445 aa16.41■□□□□ 0.22
NME3-205ENST00000563854 SMSP52788 366 aa16.41■□□□□ 0.22
NME3-205ENST00000563854 HNRNPH2P55795 449 aaKnown RBP16.41■□□□□ 0.22
NME3-205ENST00000563854 TNFRSF17Q02223 184 aa16.41■□□□□ 0.22
NME3-205ENST00000563854 PCDH1Q08174 1060 aa16.41■□□□□ 0.22
NME3-205ENST00000563854 PCBP2Q15366 365 aaKnown RBP eCLIP16.41■□□□□ 0.22
NME3-205ENST00000563854 BNC2Q6ZN30 1099 aaPredicted RBP16.41■□□□□ 0.22
NME3-205ENST00000563854 GPR180Q86V85 440 aa16.41■□□□□ 0.22
NME3-205ENST00000563854 MNS1Q8NEH6 495 aa16.41■□□□□ 0.22
NME3-205ENST00000563854 SLC44A1Q8WWI5 657 aa16.41■□□□□ 0.22
NME3-205ENST00000563854 PPWD1Q96BP3 646 aaKnown RBP16.41■□□□□ 0.22
NME3-205ENST00000563854 MTFMTQ96DP5 389 aaKnown RBP16.41■□□□□ 0.22
NME3-205ENST00000563854 XPR1Q9UBH6 696 aa16.41■□□□□ 0.22
NME3-205ENST00000563854 MEMO1Q9Y316 297 aa16.41■□□□□ 0.22
NME3-205ENST00000563854 TNPO3Q9Y5L0 923 aaKnown RBP16.41■□□□□ 0.22
NME3-205ENST00000563854 A0A1B0GTH9 108 aa16.4■□□□□ 0.22
NME3-205ENST00000563854 FAM166BA8MTA8 275 aa16.4■□□□□ 0.22
NME3-205ENST00000563854 DYRK3O43781 588 aa16.4■□□□□ 0.22
NME3-205ENST00000563854 KLK8O60259 260 aa16.4■□□□□ 0.22
NME3-205ENST00000563854 EEDO75530 441 aaKnown RBP16.4■□□□□ 0.22
NME3-205ENST00000563854 TPOP07202 933 aa16.4■□□□□ 0.22
NME3-205ENST00000563854 CTAGE8P0CG41 777 aa16.4■□□□□ 0.22
NME3-205ENST00000563854 PTX3P26022 381 aaPredicted RBP16.4■□□□□ 0.22
NME3-205ENST00000563854 TLX1P31314 330 aaPredicted RBP16.4■□□□□ 0.22
NME3-205ENST00000563854 BUD31P41223 144 aaPredicted RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms