RNA–Protein interactions for RNA: ENST00000562707.5

CMTM3-205, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CMTM3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-205ENST00000562707 KCNC2Q96PR1 638 aa15.33■□□□□ 0.04
CMTM3-205ENST00000562707 DDX47Q9H0S4 455 aaKnown RBP15.33■□□□□ 0.04
CMTM3-205ENST00000562707 CXXC4Q9H2H0 198 aa15.33■□□□□ 0.04
CMTM3-205ENST00000562707 LYRM4Q9HD34 91 aa15.33■□□□□ 0.04
CMTM3-205ENST00000562707 PRDM7Q9NQW5 492 aa15.33■□□□□ 0.04
CMTM3-205ENST00000562707 TUBA8Q9NY65 449 aaPredicted RBP15.33■□□□□ 0.04
CMTM3-205ENST00000562707 WWOXQ9NZC7 414 aa15.33■□□□□ 0.04
CMTM3-205ENST00000562707 ZNF490Q9ULM2 529 aaPredicted RBP15.33■□□□□ 0.04
CMTM3-205ENST00000562707 ATG4BQ9Y4P1 393 aa15.33■□□□□ 0.04
CMTM3-205ENST00000562707 PSAT1Q9Y617 370 aa15.33■□□□□ 0.04
CMTM3-205ENST00000562707 TEX264Q9Y6I9 313 aa15.33■□□□□ 0.04
CMTM3-205ENST00000562707 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.33■□□□□ 0.04
CMTM3-205ENST00000562707 DYRK3O43781 588 aa15.32■□□□□ 0.04
CMTM3-205ENST00000562707 LDB3O75112 727 aa15.32■□□□□ 0.04
CMTM3-205ENST00000562707 TBX6O95947 436 aaPredicted RBP15.32■□□□□ 0.04
CMTM3-205ENST00000562707 CELA3AP09093 270 aa15.32■□□□□ 0.04
CMTM3-205ENST00000562707 CCL3P10147 92 aa15.32■□□□□ 0.04
CMTM3-205ENST00000562707 COX7A2P14406 83 aa15.32■□□□□ 0.04
CMTM3-205ENST00000562707 ADH7P40394 386 aa15.32■□□□□ 0.04
CMTM3-205ENST00000562707 ARL4CP56559 192 aa15.32■□□□□ 0.04
CMTM3-205ENST00000562707 TBL3Q12788 808 aaKnown RBP15.32■□□□□ 0.04
CMTM3-205ENST00000562707 LAPTM5Q13571 262 aa15.32■□□□□ 0.04
CMTM3-205ENST00000562707 TGFBIQ15582 683 aa15.32■□□□□ 0.04
CMTM3-205ENST00000562707 MPEG1Q2M385 716 aa15.32■□□□□ 0.04
CMTM3-205ENST00000562707 PIGGQ5H8A4 983 aa15.32■□□□□ 0.04
CMTM3-205ENST00000562707 PAGE2BQ5JRK9 111 aa15.32■□□□□ 0.04
CMTM3-205ENST00000562707 RIPPLY2Q5TAB7 128 aa15.32■□□□□ 0.04
CMTM3-205ENST00000562707 SLC22A10Q63ZE4 541 aa15.32■□□□□ 0.04
CMTM3-205ENST00000562707 SNX31Q8N9S9 440 aa15.32■□□□□ 0.04
CMTM3-205ENST00000562707 SLCO2A1Q92959 643 aa15.32■□□□□ 0.04
CMTM3-205ENST00000562707 PTCD3Q96EY7 689 aaKnown RBP15.32■□□□□ 0.04
CMTM3-205ENST00000562707 TBCDQ9BTW9 1192 aa15.32■□□□□ 0.04
CMTM3-205ENST00000562707 EFCAB11Q9BUY7 163 aa15.32■□□□□ 0.04
CMTM3-205ENST00000562707 POPDC3Q9HBV1 291 aa15.32■□□□□ 0.04
CMTM3-205ENST00000562707 NSMCE4AQ9NXX6 385 aa15.32■□□□□ 0.04
CMTM3-205ENST00000562707 B4GALT7Q9UBV7 327 aa15.32■□□□□ 0.04
CMTM3-205ENST00000562707 ST6GALNAC2Q9UJ37 374 aa15.32■□□□□ 0.04
CMTM3-205ENST00000562707 TAPBPO15533 448 aa15.31■□□□□ 0.04
CMTM3-205ENST00000562707 ZNF354AO60765 605 aaPredicted RBP15.31■□□□□ 0.04
CMTM3-205ENST00000562707 STK16O75716 305 aa15.31■□□□□ 0.04
CMTM3-205ENST00000562707 ETHE1O95571 254 aa15.31■□□□□ 0.04
CMTM3-205ENST00000562707 IVDP26440 423 aa15.31■□□□□ 0.04
CMTM3-205ENST00000562707 GGT5P36269 586 aa15.31■□□□□ 0.04
CMTM3-205ENST00000562707 PIGAP37287 484 aa15.31■□□□□ 0.04
CMTM3-205ENST00000562707 ID2Q02363 134 aa15.31■□□□□ 0.04
CMTM3-205ENST00000562707 ASPHQ12797 758 aa15.31■□□□□ 0.04
CMTM3-205ENST00000562707 ILF2Q12905 390 aaKnown RBP15.31■□□□□ 0.04
CMTM3-205ENST00000562707 DOC2AQ14183 400 aa15.31■□□□□ 0.04
CMTM3-205ENST00000562707 SULT1C3Q6IMI6 304 aa15.31■□□□□ 0.04
CMTM3-205ENST00000562707 ADNP2Q6IQ32 1131 aa15.31■□□□□ 0.04
CMTM3-205ENST00000562707 SYDE1Q6ZW31 735 aaPredicted RBP15.31■□□□□ 0.04
CMTM3-205ENST00000562707 GPSM1Q86YR5 675 aa15.31■□□□□ 0.04
CMTM3-205ENST00000562707 ANKMY2Q8IV38 441 aa15.31■□□□□ 0.04
CMTM3-205ENST00000562707 ACOT4Q8N9L9 421 aa15.31■□□□□ 0.04
CMTM3-205ENST00000562707 GOT1L1Q8NHS2 421 aaPredicted RBP15.31■□□□□ 0.04
CMTM3-205ENST00000562707 SLC22A8Q8TCC7 542 aa15.31■□□□□ 0.04
CMTM3-205ENST00000562707 LRRC46Q96FV0 321 aa15.31■□□□□ 0.04
CMTM3-205ENST00000562707 CAPZA3Q96KX2 299 aa15.31■□□□□ 0.04
CMTM3-205ENST00000562707 DGAT2Q96PD7 388 aa15.31■□□□□ 0.04
CMTM3-205ENST00000562707 MAPKAP1Q9BPZ7 522 aa15.31■□□□□ 0.04
CMTM3-205ENST00000562707 CNPPD1Q9BV87 410 aa15.31■□□□□ 0.04
CMTM3-205ENST00000562707 DERL2Q9GZP9 239 aa15.31■□□□□ 0.04
CMTM3-205ENST00000562707 CLEC4MQ9H2X3 399 aaPredicted RBP15.31■□□□□ 0.04
CMTM3-205ENST00000562707 SEMA4BQ9NPR2 832 aaPredicted RBP15.31■□□□□ 0.04
CMTM3-205ENST00000562707 BOKQ9UMX3 212 aaPredicted RBP15.31■□□□□ 0.04
CMTM3-205ENST00000562707 HSPB2A8KAH6 182 aa15.3■□□□□ 0.04
CMTM3-205ENST00000562707 CES2O00748 559 aa15.3■□□□□ 0.04
CMTM3-205ENST00000562707 KLK2P20151 261 aa15.3■□□□□ 0.04
CMTM3-205ENST00000562707 CPN2P22792 545 aa15.3■□□□□ 0.04
CMTM3-205ENST00000562707 DNASE1P24855 282 aa15.3■□□□□ 0.04
CMTM3-205ENST00000562707 ATP5A1P25705 553 aaKnown RBP15.3■□□□□ 0.04
CMTM3-205ENST00000562707 UQCRC1P31930 480 aa15.3■□□□□ 0.04
CMTM3-205ENST00000562707 HSPA7P48741 367 aa15.3■□□□□ 0.04
CMTM3-205ENST00000562707 KCNJ2P63252 427 aa15.3■□□□□ 0.04
CMTM3-205ENST00000562707 IRF8Q02556 426 aa15.3■□□□□ 0.04
CMTM3-205ENST00000562707 HSPB2Q16082 182 aa15.3■□□□□ 0.04
CMTM3-205ENST00000562707 PDK4Q16654 411 aa15.3■□□□□ 0.04
CMTM3-205ENST00000562707 AP5B1Q2VPB7 878 aa15.3■□□□□ 0.04
CMTM3-205ENST00000562707 CDKL4Q5MAI5 379 aa15.3■□□□□ 0.04
CMTM3-205ENST00000562707 SLC35F6Q8N357 371 aa15.3■□□□□ 0.04
CMTM3-205ENST00000562707 NUBPLQ8TB37 319 aa15.3■□□□□ 0.04
CMTM3-205ENST00000562707 ZNF721Q8TF20 911 aa15.3■□□□□ 0.04
CMTM3-205ENST00000562707 ESAMQ96AP7 390 aa15.3■□□□□ 0.04
CMTM3-205ENST00000562707 ANKRD9Q96BM1 317 aaPredicted RBP15.3■□□□□ 0.04
CMTM3-205ENST00000562707 WDR34Q96EX3 536 aa15.3■□□□□ 0.04
CMTM3-205ENST00000562707 RMND5BQ96G75 393 aaPredicted RBP15.3■□□□□ 0.04
CMTM3-205ENST00000562707 RBM18Q96H35 190 aaKnown RBP15.3■□□□□ 0.04
CMTM3-205ENST00000562707 SENP5Q96HI0 755 aaPredicted RBP15.3■□□□□ 0.04
CMTM3-205ENST00000562707 KRT12Q99456 494 aa15.3■□□□□ 0.04
CMTM3-205ENST00000562707 GPATCH1Q9BRR8 931 aaKnown RBP15.3■□□□□ 0.04
CMTM3-205ENST00000562707 WDR83Q9BRX9 315 aaKnown RBP15.3■□□□□ 0.04
CMTM3-205ENST00000562707 TMEM79Q9BSE2 394 aa15.3■□□□□ 0.04
CMTM3-205ENST00000562707 RHOJQ9H4E5 214 aa15.3■□□□□ 0.04
CMTM3-205ENST00000562707 ZFP64Q9NPA5 681 aa15.3■□□□□ 0.04
CMTM3-205ENST00000562707 RASSF1Q9NS23 344 aa15.3■□□□□ 0.04
CMTM3-205ENST00000562707 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.3■□□□□ 0.04
CMTM3-205ENST00000562707 MOCS1Q9NZB8 636 aa15.3■□□□□ 0.04
CMTM3-205ENST00000562707 SPRR3Q9UBC9 169 aa15.3■□□□□ 0.04
CMTM3-205ENST00000562707 SNX12Q9UMY4 172 aa15.3■□□□□ 0.04
CMTM3-205ENST00000562707 PCDHGB3Q9Y5G1 929 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms