RNA–Protein interactions for RNA: ENST00000561896.1

MSLN-203, Transcript of mesothelin, humanhuman

TSL 5

Gene MSLN, Length 1,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-203ENST00000561896 ZNF358Q9NW07 568 aa23.68■■□□□ 1.38
MSLN-203ENST00000561896 KLF13Q9Y2Y9 288 aaPredicted RBP23.68■■□□□ 1.38
MSLN-203ENST00000561896 CRYBG3Q68DQ2 2970 aa23.68■■□□□ 1.38
MSLN-203ENST00000561896 TRIM49D1C9J1S8 452 aa23.67■■□□□ 1.38
MSLN-203ENST00000561896 POC1B-GALNT4F8VUJ3 575 aa23.67■■□□□ 1.38
MSLN-203ENST00000561896 SAP18O00422 153 aaKnown RBP23.67■■□□□ 1.38
MSLN-203ENST00000561896 PLPP1O14494 284 aa23.67■■□□□ 1.38
MSLN-203ENST00000561896 LDB3O75112 727 aa23.67■■□□□ 1.38
MSLN-203ENST00000561896 SMIM24O75264 130 aa23.67■■□□□ 1.38
MSLN-203ENST00000561896 SNRPAP09012 282 aaKnown RBP23.67■■□□□ 1.38
MSLN-203ENST00000561896 RPS13P62277 151 aaKnown RBP23.67■■□□□ 1.38
MSLN-203ENST00000561896 CPSF6Q16630 551 aaKnown RBP eCLIP23.67■■□□□ 1.38
MSLN-203ENST00000561896 C1QL3Q5VWW1 255 aa23.67■■□□□ 1.38
MSLN-203ENST00000561896 MTFR2Q6P444 385 aa23.67■■□□□ 1.38
MSLN-203ENST00000561896 HSDL2Q6YN16 418 aa23.67■■□□□ 1.38
MSLN-203ENST00000561896 TRMT10CQ7L0Y3 403 aaKnown RBP23.67■■□□□ 1.38
MSLN-203ENST00000561896 PNPLA5Q7Z6Z6 429 aaPredicted RBP23.67■■□□□ 1.38
MSLN-203ENST00000561896 GPR180Q86V85 440 aa23.67■■□□□ 1.38
MSLN-203ENST00000561896 FJX1Q86VR8 437 aa23.67■■□□□ 1.38
MSLN-203ENST00000561896 SIAH3Q8IW03 269 aa23.67■■□□□ 1.38
MSLN-203ENST00000561896 TMEM156Q8N614 296 aa23.67■■□□□ 1.38
MSLN-203ENST00000561896 ANKRD9Q96BM1 317 aaPredicted RBP23.67■■□□□ 1.38
MSLN-203ENST00000561896 MRPL46Q9H2W6 279 aaKnown RBP23.67■■□□□ 1.38
MSLN-203ENST00000561896 XPR1Q9UBH6 696 aa23.67■■□□□ 1.38
MSLN-203ENST00000561896 RNF11Q9Y3C5 154 aa23.67■■□□□ 1.38
MSLN-203ENST00000561896 ITPR2Q14571 2701 aa23.67■■□□□ 1.38
MSLN-203ENST00000561896 TMEM200CA6NKL6 621 aa23.66■■□□□ 1.38
MSLN-203ENST00000561896 OR7A17O14581 309 aa23.66■■□□□ 1.38
MSLN-203ENST00000561896 SH3BGRLO75368 114 aa23.66■■□□□ 1.38
MSLN-203ENST00000561896 TLX1P31314 330 aaPredicted RBP23.66■■□□□ 1.38
MSLN-203ENST00000561896 CA7P43166 264 aa23.66■■□□□ 1.38
MSLN-203ENST00000561896 SSR4P51571 173 aa23.66■■□□□ 1.38
MSLN-203ENST00000561896 CYP4Z2PQ8N1L4 340 aa23.66■■□□□ 1.38
MSLN-203ENST00000561896 MTBPQ96DY7 904 aa23.66■■□□□ 1.38
MSLN-203ENST00000561896 PHF21BQ96EK2 531 aa23.66■■□□□ 1.38
MSLN-203ENST00000561896 ZNF717Q9BY31 904 aaPredicted RBP23.66■■□□□ 1.38
MSLN-203ENST00000561896 RPF2Q9H7B2 306 aaKnown RBP23.66■■□□□ 1.38
MSLN-203ENST00000561896 NOL11Q9H8H0 719 aaKnown RBP23.66■■□□□ 1.38
MSLN-203ENST00000561896 DDX31Q9H8H2 851 aaKnown RBP23.66■■□□□ 1.38
MSLN-203ENST00000561896 MYOTQ9UBF9 498 aa23.66■■□□□ 1.38
MSLN-203ENST00000561896 PCTPQ9UKL6 214 aa23.66■■□□□ 1.38
MSLN-203ENST00000561896 NFU1Q9UMS0 254 aa23.66■■□□□ 1.38
MSLN-203ENST00000561896 EXOC1LA0A1B0GW35 172 aa23.65■■□□□ 1.38
MSLN-203ENST00000561896 C17orf105B2RV13 164 aa23.65■■□□□ 1.38
MSLN-203ENST00000561896 KLRC4-KLRK1H3BQV0 150 aa23.65■■□□□ 1.38
MSLN-203ENST00000561896 SEMA3DO95025 777 aa23.65■■□□□ 1.38
MSLN-203ENST00000561896 COX7A2P14406 83 aa23.65■■□□□ 1.38
MSLN-203ENST00000561896 CCNG1P51959 295 aa23.65■■□□□ 1.38
MSLN-203ENST00000561896 CASP6P55212 293 aa23.65■■□□□ 1.38
MSLN-203ENST00000561896 TNFRSF17Q02223 184 aa23.65■■□□□ 1.38
MSLN-203ENST00000561896 MRM1Q6IN84 353 aaKnown RBP23.65■■□□□ 1.38
MSLN-203ENST00000561896 TIFABQ6ZNK6 161 aa23.65■■□□□ 1.38
MSLN-203ENST00000561896 LCA5Q86VQ0 697 aa23.65■■□□□ 1.38
MSLN-203ENST00000561896 RNF175Q8N4F7 328 aa23.65■■□□□ 1.38
MSLN-203ENST00000561896 ATP6V1E2Q96A05 226 aa23.65■■□□□ 1.38
MSLN-203ENST00000561896 SCYL1Q96KG9 808 aa23.65■■□□□ 1.38
MSLN-203ENST00000561896 SORBS1Q9BX66 1292 aaKnown RBP23.65■■□□□ 1.38
MSLN-203ENST00000561896 LYARQ9NX58 379 aaKnown RBP23.65■■□□□ 1.38
MSLN-203ENST00000561896 ZNF835Q9Y2P0 537 aa23.65■■□□□ 1.38
MSLN-203ENST00000561896 TEX15Q9BXT5 2789 aa23.65■■□□□ 1.38
MSLN-203ENST00000561896 CELSR2Q9HCU4 2923 aa23.65■■□□□ 1.38
MSLN-203ENST00000561896 A0A0A6YYD5 115 aa23.64■■□□□ 1.37
MSLN-203ENST00000561896 TRGV8A0A0C4DH27 118 aa23.64■■□□□ 1.37
MSLN-203ENST00000561896 PROM1O43490 865 aa23.64■■□□□ 1.37
MSLN-203ENST00000561896 PRKNO60260 465 aaPredicted RBP23.64■■□□□ 1.37
MSLN-203ENST00000561896 SLC19A2O60779 497 aa23.64■■□□□ 1.37
MSLN-203ENST00000561896 ZG16O60844 167 aa23.64■■□□□ 1.37
MSLN-203ENST00000561896 ZNF24P17028 368 aa23.64■■□□□ 1.37
MSLN-203ENST00000561896 TNNI3P19429 210 aa23.64■■□□□ 1.37
MSLN-203ENST00000561896 BSGP35613 385 aa23.64■■□□□ 1.37
MSLN-203ENST00000561896 BUD31P41223 144 aaPredicted RBP23.64■■□□□ 1.37
MSLN-203ENST00000561896 STT3AP46977 705 aa23.64■■□□□ 1.37
MSLN-203ENST00000561896 GGTA1PQ4G0N0 100 aa23.64■■□□□ 1.37
MSLN-203ENST00000561896 HIST2H2BCQ6DN03 193 aa23.64■■□□□ 1.37
MSLN-203ENST00000561896 ADGRD1Q6QNK2 874 aa23.64■■□□□ 1.37
MSLN-203ENST00000561896 BNC2Q6ZN30 1099 aaPredicted RBP23.64■■□□□ 1.37
MSLN-203ENST00000561896 Q6ZPB1 254 aaPredicted RBP23.64■■□□□ 1.37
MSLN-203ENST00000561896 OR52B6Q8NGF0 335 aa23.64■■□□□ 1.37
MSLN-203ENST00000561896 OR5L2Q8NGL0 311 aa23.64■■□□□ 1.37
MSLN-203ENST00000561896 SLC2A12Q8TD20 617 aa23.64■■□□□ 1.37
MSLN-203ENST00000561896 SERPINI1Q99574 410 aa23.64■■□□□ 1.37
MSLN-203ENST00000561896 C1QTNF3Q9BXJ4 246 aa23.64■■□□□ 1.37
MSLN-203ENST00000561896 OR8D2Q9GZM6 311 aa23.64■■□□□ 1.37
MSLN-203ENST00000561896 RYDENQ9NUL5 291 aaKnown RBP23.64■■□□□ 1.37
MSLN-203ENST00000561896 SUCOQ9UBS9 1254 aaKnown RBP23.64■■□□□ 1.37
MSLN-203ENST00000561896 FETUBQ9UGM5 382 aa23.64■■□□□ 1.37
MSLN-203ENST00000561896 ATG4BQ9Y4P1 393 aa23.64■■□□□ 1.37
MSLN-203ENST00000561896 CACNA1DQ01668 2161 aa23.64■■□□□ 1.37
MSLN-203ENST00000561896 NPIPA5E9PKD4 350 aa23.63■■□□□ 1.37
MSLN-203ENST00000561896 ASNA1O43681 348 aa23.63■■□□□ 1.37
MSLN-203ENST00000561896 FGF17O60258 216 aa23.63■■□□□ 1.37
MSLN-203ENST00000561896 OR2J2O76002 312 aa23.63■■□□□ 1.37
MSLN-203ENST00000561896 SRSF11Q05519 484 aaKnown RBP23.63■■□□□ 1.37
MSLN-203ENST00000561896 NUDT13Q86X67 352 aa23.63■■□□□ 1.37
MSLN-203ENST00000561896 TMEM151AQ8N4L1 468 aa23.63■■□□□ 1.37
MSLN-203ENST00000561896 CPSF7Q8N684 471 aaKnown RBP23.63■■□□□ 1.37
MSLN-203ENST00000561896 UHMK1Q8TAS1 419 aaKnown RBP23.63■■□□□ 1.37
MSLN-203ENST00000561896 RBM18Q96H35 190 aaKnown RBP23.63■■□□□ 1.37
MSLN-203ENST00000561896 DGAT2Q96PD7 388 aa23.63■■□□□ 1.37
MSLN-203ENST00000561896 PELOQ9BRX2 385 aaKnown RBP23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms