RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 HMOX2P30519 316 aa12.99□□□□□ -0.33
TPM1-230ENST00000561266 CASRP41180 1078 aa12.99□□□□□ -0.33
TPM1-230ENST00000561266 TSFMP43897 325 aaKnown RBP12.99□□□□□ -0.33
TPM1-230ENST00000561266 ARFIP1P53367 373 aa12.99□□□□□ -0.33
TPM1-230ENST00000561266 PHEXP78562 749 aa12.99□□□□□ -0.33
TPM1-230ENST00000561266 TNFRSF17Q02223 184 aa12.99□□□□□ -0.33
TPM1-230ENST00000561266 IGFBP7Q16270 282 aa12.99□□□□□ -0.33
TPM1-230ENST00000561266 CLEC6AQ6EIG7 209 aa12.99□□□□□ -0.33
TPM1-230ENST00000561266 ISLR2Q6UXK2 745 aa12.99□□□□□ -0.33
TPM1-230ENST00000561266 CUZD1Q86UP6 607 aa12.99□□□□□ -0.33
TPM1-230ENST00000561266 CRLF3Q8IUI8 442 aa12.99□□□□□ -0.33
TPM1-230ENST00000561266 C1orf52Q8N6N3 182 aaKnown RBP12.99□□□□□ -0.33
TPM1-230ENST00000561266 APCDD1LQ8NCL9 501 aa12.99□□□□□ -0.33
TPM1-230ENST00000561266 OR6Y1Q8NGX8 325 aa12.99□□□□□ -0.33
TPM1-230ENST00000561266 M1APQ8TC57 530 aa12.99□□□□□ -0.33
TPM1-230ENST00000561266 PTPMT1Q8WUK0 201 aaPredicted RBP12.99□□□□□ -0.33
TPM1-230ENST00000561266 CHTF18Q8WVB6 975 aa12.99□□□□□ -0.33
TPM1-230ENST00000561266 SREK1Q8WXA9 508 aaKnown RBP12.99□□□□□ -0.33
TPM1-230ENST00000561266 CCDC126Q96EE4 140 aa12.99□□□□□ -0.33
TPM1-230ENST00000561266 APIPQ96GX9 242 aa12.99□□□□□ -0.33
TPM1-230ENST00000561266 VPS50Q96JG6 964 aa12.99□□□□□ -0.33
TPM1-230ENST00000561266 PKNOX2Q96KN3 472 aa12.99□□□□□ -0.33
TPM1-230ENST00000561266 SMC6Q96SB8 1091 aa12.99□□□□□ -0.33
TPM1-230ENST00000561266 BRF2Q9HAW0 419 aa12.99□□□□□ -0.33
TPM1-230ENST00000561266 MMP25Q9NPA2 562 aa12.99□□□□□ -0.33
TPM1-230ENST00000561266 ANAPC2Q9UJX6 822 aa12.99□□□□□ -0.33
TPM1-230ENST00000561266 HELZ2Q9BYK8 2649 aaKnown RBP12.98□□□□□ -0.33
TPM1-230ENST00000561266 CCDC151A5D8V7 595 aa12.98□□□□□ -0.33
TPM1-230ENST00000561266 A8MUI8 341 aa12.98□□□□□ -0.33
TPM1-230ENST00000561266 TMEM233B4DJY2 109 aa12.98□□□□□ -0.33
TPM1-230ENST00000561266 HRKO00198 91 aa12.98□□□□□ -0.33
TPM1-230ENST00000561266 CLDN4O14493 209 aa12.98□□□□□ -0.33
TPM1-230ENST00000561266 DPM1O60762 260 aa12.98□□□□□ -0.33
TPM1-230ENST00000561266 MYO1DO94832 1006 aa12.98□□□□□ -0.33
TPM1-230ENST00000561266 WDPCPO95876 746 aa12.98□□□□□ -0.33
TPM1-230ENST00000561266 ENO1P06733 434 aaKnown RBP12.98□□□□□ -0.33
TPM1-230ENST00000561266 IGLV3-21P80748 117 aaPredicted RBP12.98□□□□□ -0.33
TPM1-230ENST00000561266 FOLH1Q04609 750 aa12.98□□□□□ -0.33
TPM1-230ENST00000561266 TLE1Q04724 770 aa12.98□□□□□ -0.33
TPM1-230ENST00000561266 MFAP5Q13361 173 aa12.98□□□□□ -0.33
TPM1-230ENST00000561266 ZNF750Q32MQ0 723 aa12.98□□□□□ -0.33
TPM1-230ENST00000561266 CRB2Q5IJ48 1285 aa12.98□□□□□ -0.33
TPM1-230ENST00000561266 ZNF468Q5VIY5 522 aaPredicted RBP12.98□□□□□ -0.33
TPM1-230ENST00000561266 LRIG3Q6UXM1 1119 aa12.98□□□□□ -0.33
TPM1-230ENST00000561266 Q6ZS92 163 aa12.98□□□□□ -0.33
TPM1-230ENST00000561266 NUDT13Q86X67 352 aa12.98□□□□□ -0.33
TPM1-230ENST00000561266 ADAMTS18Q8TE60 1221 aa12.98□□□□□ -0.33
TPM1-230ENST00000561266 PPWD1Q96BP3 646 aaKnown RBP12.98□□□□□ -0.33
TPM1-230ENST00000561266 TM4SF18Q96CE8 201 aa12.98□□□□□ -0.33
TPM1-230ENST00000561266 C11orf24Q96F05 449 aaPredicted RBP12.98□□□□□ -0.33
TPM1-230ENST00000561266 LMF1Q96S06 567 aa12.98□□□□□ -0.33
TPM1-230ENST00000561266 CENPHQ9H3R5 247 aa12.98□□□□□ -0.33
TPM1-230ENST00000561266 TUBB1Q9H4B7 451 aa12.98□□□□□ -0.33
TPM1-230ENST00000561266 RPF2Q9H7B2 306 aaKnown RBP12.98□□□□□ -0.33
TPM1-230ENST00000561266 ZNF395Q9H8N7 513 aaPredicted RBP12.98□□□□□ -0.33
TPM1-230ENST00000561266 LIN28AQ9H9Z2 209 aaKnown RBP12.98□□□□□ -0.33
TPM1-230ENST00000561266 KCNK13Q9HB14 408 aa12.98□□□□□ -0.33
TPM1-230ENST00000561266 VTI1BQ9UEU0 232 aa12.98□□□□□ -0.33
TPM1-230ENST00000561266 CCL27Q9Y4X3 112 aa12.98□□□□□ -0.33
TPM1-230ENST00000561266 HEMK1Q9Y5R4 338 aaPredicted RBP12.98□□□□□ -0.33
TPM1-230ENST00000561266 TMEM200CA6NKL6 621 aa12.97□□□□□ -0.33
TPM1-230ENST00000561266 CTIFO43310 598 aaKnown RBP12.97□□□□□ -0.33
TPM1-230ENST00000561266 ULK1O75385 1050 aa12.97□□□□□ -0.33
TPM1-230ENST00000561266 DDAH2O95865 285 aa12.97□□□□□ -0.33
TPM1-230ENST00000561266 KRT6AP02538 564 aa12.97□□□□□ -0.33
TPM1-230ENST00000561266 KRT6BP04259 564 aa12.97□□□□□ -0.33
TPM1-230ENST00000561266 BPGMP07738 259 aa12.97□□□□□ -0.33
TPM1-230ENST00000561266 KRT6CP48668 564 aa12.97□□□□□ -0.33
TPM1-230ENST00000561266 DUSP2Q05923 314 aa12.97□□□□□ -0.33
TPM1-230ENST00000561266 BTKQ06187 659 aa12.97□□□□□ -0.33
TPM1-230ENST00000561266 EXT1Q16394 746 aa12.97□□□□□ -0.33
TPM1-230ENST00000561266 PRSS53Q2L4Q9 553 aa12.97□□□□□ -0.33
TPM1-230ENST00000561266 CFAP157Q5JU67 520 aa12.97□□□□□ -0.33
TPM1-230ENST00000561266 CCNYL2Q5T2Q4 361 aa12.97□□□□□ -0.33
TPM1-230ENST00000561266 CYP20A1Q6UW02 462 aa12.97□□□□□ -0.33
TPM1-230ENST00000561266 C16orf47Q6ZP98 133 aaPredicted RBP12.97□□□□□ -0.33
TPM1-230ENST00000561266 BEST3Q8N1M1 668 aa12.97□□□□□ -0.33
TPM1-230ENST00000561266 DNAJB14Q8TBM8 379 aa12.97□□□□□ -0.33
TPM1-230ENST00000561266 NCLNQ969V3 563 aa12.97□□□□□ -0.33
TPM1-230ENST00000561266 C19orf60Q96EN9 201 aa12.97□□□□□ -0.33
TPM1-230ENST00000561266 IQCGQ9H095 443 aaKnown RBP12.97□□□□□ -0.33
TPM1-230ENST00000561266 CDCP1Q9H5V8 836 aa12.97□□□□□ -0.33
TPM1-230ENST00000561266 ADAP2Q9NPF8 381 aa12.97□□□□□ -0.33
TPM1-230ENST00000561266 LYARQ9NX58 379 aaKnown RBP12.97□□□□□ -0.33
TPM1-230ENST00000561266 HEY2Q9UBP5 337 aa12.97□□□□□ -0.33
TPM1-230ENST00000561266 VPS29Q9UBQ0 182 aa12.97□□□□□ -0.33
TPM1-230ENST00000561266 ADAM29Q9UKF5 820 aa12.97□□□□□ -0.33
TPM1-230ENST00000561266 PPIEQ9UNP9 301 aaKnown RBP12.97□□□□□ -0.33
TPM1-230ENST00000561266 MRPS33Q9Y291 106 aaKnown RBP12.97□□□□□ -0.33
TPM1-230ENST00000561266 NTNG1Q9Y2I2 539 aa12.97□□□□□ -0.33
TPM1-230ENST00000561266 PRRC2CQ9Y520 2896 aaKnown RBP12.97□□□□□ -0.33
TPM1-230ENST00000561266 GCN1Q92616 2671 aaKnown RBP12.96□□□□□ -0.33
TPM1-230ENST00000561266 RELNP78509 3460 aa12.96□□□□□ -0.33
TPM1-230ENST00000561266 SERTM1A2A2V5 107 aa12.96□□□□□ -0.33
TPM1-230ENST00000561266 WDR91A4D1P6 747 aa12.96□□□□□ -0.33
TPM1-230ENST00000561266 IFNA16P05015 189 aa12.96□□□□□ -0.33
TPM1-230ENST00000561266 ALPPP05187 535 aa12.96□□□□□ -0.33
TPM1-230ENST00000561266 DHRS4L1P0CG22 281 aa12.96□□□□□ -0.33
TPM1-230ENST00000561266 ICAM2P13598 275 aa12.96□□□□□ -0.33
TPM1-230ENST00000561266 PTGER1P34995 402 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms