RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 CORO6Q6QEF8 472 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 TMEM107Q6UX40 140 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 TMEM64Q6YI46 380 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 Q6ZNX1 250 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 IL17RELQ6ZVW7 336 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 MTERF4Q7Z6M4 381 aaKnown RBP1.9□□□□□ -2.11
RTF1-207ENST00000561076 LINC00523Q86TU6 105 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 SLC22A16Q86VW1 577 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 CDR2LQ86X02 465 aaPredicted RBP1.9□□□□□ -2.11
RTF1-207ENST00000561076 LRRC49Q8IUZ0 686 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 VSTM4Q8IW00 320 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 MMD2Q8IY49 270 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 LRRC75A-AS1Q8N1F1 130 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 CRYBG2Q8N1P7 616 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 TMEM99Q8N816 258 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 ASCC1Q8N9N2 400 aaKnown RBP1.9□□□□□ -2.11
RTF1-207ENST00000561076 TMEM104Q8NE00 496 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 ZNF548Q8NEK5 533 aaPredicted RBP1.9□□□□□ -2.11
RTF1-207ENST00000561076 OR4C5Q8NGB2 326 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 OR5T3Q8NGG3 340 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 OR5D13Q8NGL4 314 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 OR13C5Q8NGS8 318 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 OR9A1PQ8NGU1 263 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 SPATA22Q8NHS9 363 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 WDR36Q8NI36 951 aaKnown RBP1.9□□□□□ -2.11
RTF1-207ENST00000561076 HMGCLL1Q8TB92 370 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 RNF128Q8TEB7 428 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 SMG7Q92540 1137 aaKnown RBP1.9□□□□□ -2.11
RTF1-207ENST00000561076 EMG1Q92979 244 aaKnown RBP1.9□□□□□ -2.11
RTF1-207ENST00000561076 SLC38A4Q969I6 547 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 MYLPFQ96A32 169 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 PHF21AQ96BD5 680 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 TADA1Q96BN2 335 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 REPS1Q96D71 796 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 MYEOVQ96EZ4 313 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 TMEM19Q96HH6 336 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 C7orf34Q96L11 122 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 LRR1Q96L50 414 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 FAM20AQ96MK3 541 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 INPP4AQ96PE3 977 aaPredicted RBP1.9□□□□□ -2.11
RTF1-207ENST00000561076 TECTBQ96PL2 329 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 TRNT1Q96Q11 434 aaKnown RBP1.9□□□□□ -2.11
RTF1-207ENST00000561076 ADOQ96SZ5 270 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 GFI1Q99684 422 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 PRMT1Q99873 361 aaKnown RBP1.9□□□□□ -2.11
RTF1-207ENST00000561076 MACROD1Q9BQ69 325 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 LZTS2Q9BRK4 669 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 HAUS8Q9BT25 410 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 NDUFAF3Q9BU61 184 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 RBM24Q9BX46 236 aaKnown RBP1.9□□□□□ -2.11
RTF1-207ENST00000561076 TM2D2Q9BX73 214 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 TDRD1Q9BXT4 1180 aaKnown RBP1.9□□□□□ -2.11
RTF1-207ENST00000561076 IL22Q9GZX6 179 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 NSRP1Q9H0G5 558 aaKnown RBP1.9□□□□□ -2.11
RTF1-207ENST00000561076 MAGT1Q9H0U3 335 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 GLT8D2Q9H1C3 349 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 SLC26A1Q9H2B4 701 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 DPEP3Q9H4B8 488 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 SLA2Q9H6Q3 261 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 ZDHHC6Q9H6R6 413 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 ESRP2Q9H6T0 727 aaKnown RBP1.9□□□□□ -2.11
RTF1-207ENST00000561076 KAT8Q9H7Z6 458 aaKnown RBP1.9□□□□□ -2.11
RTF1-207ENST00000561076 CYP3A43Q9HB55 503 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 Q9N2K0 584 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 CCNB1IP1Q9NPC3 277 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 POLE4Q9NR33 117 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 MRPL17Q9NRX2 175 aaKnown RBP1.9□□□□□ -2.11
RTF1-207ENST00000561076 TMEM45AQ9NWC5 275 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 ASIC5Q9NY37 505 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 PDP1Q9P0J1 537 aaPredicted RBP1.9□□□□□ -2.11
RTF1-207ENST00000561076 PSMC3IPQ9P2W1 217 aaPredicted RBP1.9□□□□□ -2.11
RTF1-207ENST00000561076 STX18Q9P2W9 335 aaKnown RBP1.9□□□□□ -2.11
RTF1-207ENST00000561076 LHX3Q9UBR4 397 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 ERRFI1Q9UJM3 462 aaPredicted RBP1.9□□□□□ -2.11
RTF1-207ENST00000561076 PITPNC1Q9UKF7 332 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 CNOT11Q9UKZ1 510 aaKnown RBP1.9□□□□□ -2.11
RTF1-207ENST00000561076 STAP1Q9ULZ2 295 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 AMDHD2Q9Y303 409 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 ATG4BQ9Y4P1 393 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 ZSCAN21Q9Y5A6 473 aaPredicted RBP1.9□□□□□ -2.11
RTF1-207ENST00000561076 ETV7Q9Y603 341 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 TMEM94Q12767 1356 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 A0A0J9YYE9 177 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 IQANK1A0A1B0GTG1 560 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 WDR27A2RRH5 827 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 TMEM191CA6NGB0 347 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 CASTOR2A6NHX0 329 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 LRRC3CA6NJW4 275 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 CD8B2A6NJW9 211 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 TMEM200CA6NKL6 621 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 C2CD4BA6NLJ0 364 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 MARCH11A6NNE9 402 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 WASHC1A8K0Z3 465 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 A8MUA0 341 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 PRR32B1ATL7 298 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 TMEM178BH3BS89 294 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 I6L893 689 aaPredicted RBP1.89□□□□□ -2.11
RTF1-207ENST00000561076 TULP2O00295 520 aa1.89□□□□□ -2.11
RTF1-207ENST00000561076 ETV2O00321 342 aaPredicted RBP1.89□□□□□ -2.11
RTF1-207ENST00000561076 GAPDHSO14556 408 aaPredicted RBP1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms