RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 MFSD2AQ8NA29 543 aa12.92□□□□□ -0.34
TRAF3-208ENST00000560371 RHBDD1Q8TEB9 315 aa12.92□□□□□ -0.34
TRAF3-208ENST00000560371 NXPE2Q96DL1 559 aa12.92□□□□□ -0.34
TRAF3-208ENST00000560371 LPAR4Q99677 370 aa12.92□□□□□ -0.34
TRAF3-208ENST00000560371 KCNK13Q9HB14 408 aa12.92□□□□□ -0.34
TRAF3-208ENST00000560371 PCDHB16Q9NRJ7 776 aa12.92□□□□□ -0.34
TRAF3-208ENST00000560371 PLEKHA6Q9Y2H5 1048 aa12.92□□□□□ -0.34
TRAF3-208ENST00000560371 ACOT7O00154 380 aa12.92□□□□□ -0.34
TRAF3-208ENST00000560371 GJA5P36382 358 aa12.92□□□□□ -0.34
TRAF3-208ENST00000560371 PTGR1Q14914 329 aa12.92□□□□□ -0.34
TRAF3-208ENST00000560371 THOC7Q6I9Y2 204 aaKnown RBP12.92□□□□□ -0.34
TRAF3-208ENST00000560371 HORMAD2Q8N7B1 307 aa12.92□□□□□ -0.34
TRAF3-208ENST00000560371 CHST14Q8NCH0 376 aa12.92□□□□□ -0.34
TRAF3-208ENST00000560371 POLDIP3Q9BY77 421 aaKnown RBP12.92□□□□□ -0.34
TRAF3-208ENST00000560371 AHDC1Q5TGY3 1603 aaPredicted RBP12.92□□□□□ -0.34
TRAF3-208ENST00000560371 MYOCOSA0A1B0GUC4 107 aa12.92□□□□□ -0.34
TRAF3-208ENST00000560371 MBLAC1A4D2B0 266 aaPredicted RBP12.92□□□□□ -0.34
TRAF3-208ENST00000560371 ZNF99A8MXY4 864 aaPredicted RBP12.92□□□□□ -0.34
TRAF3-208ENST00000560371 PROS1P07225 676 aa12.92□□□□□ -0.34
TRAF3-208ENST00000560371 OR1E2P47887 323 aa12.92□□□□□ -0.34
TRAF3-208ENST00000560371 ECH1Q13011 328 aa12.92□□□□□ -0.34
TRAF3-208ENST00000560371 CCDC36Q8IYA8 594 aa12.92□□□□□ -0.34
TRAF3-208ENST00000560371 RANBP9Q96S59 729 aa12.92□□□□□ -0.34
TRAF3-208ENST00000560371 TTYH2Q9BSA4 534 aa12.92□□□□□ -0.34
TRAF3-208ENST00000560371 ABLIM1O14639 778 aa12.92□□□□□ -0.34
TRAF3-208ENST00000560371 LATO43561 262 aa12.92□□□□□ -0.34
TRAF3-208ENST00000560371 HTR1AP08908 422 aa12.92□□□□□ -0.34
TRAF3-208ENST00000560371 AOC1P19801 751 aa12.92□□□□□ -0.34
TRAF3-208ENST00000560371 SLC6A4P31645 630 aa12.92□□□□□ -0.34
TRAF3-208ENST00000560371 OR2B6P58173 313 aa12.92□□□□□ -0.34
TRAF3-208ENST00000560371 Q6ZSR6 202 aa12.92□□□□□ -0.34
TRAF3-208ENST00000560371 TSPAN33Q86UF1 283 aa12.92□□□□□ -0.34
TRAF3-208ENST00000560371 SLC39A11Q8N1S5 342 aa12.92□□□□□ -0.34
TRAF3-208ENST00000560371 F2RL3Q96RI0 385 aa12.92□□□□□ -0.34
TRAF3-208ENST00000560371 HCN4Q9Y3Q4 1203 aa12.92□□□□□ -0.34
TRAF3-208ENST00000560371 PRAMEF26H0Y7S4 382 aa12.92□□□□□ -0.34
TRAF3-208ENST00000560371 KLF11O14901 512 aa12.92□□□□□ -0.34
TRAF3-208ENST00000560371 EMC8O43402 210 aa12.92□□□□□ -0.34
TRAF3-208ENST00000560371 SRCP12931 536 aa12.92□□□□□ -0.34
TRAF3-208ENST00000560371 PROZP22891 400 aa12.92□□□□□ -0.34
TRAF3-208ENST00000560371 SLC10A2Q12908 348 aaPredicted RBP12.92□□□□□ -0.34
TRAF3-208ENST00000560371 ZFP69Q49AA0 526 aa12.92□□□□□ -0.34
TRAF3-208ENST00000560371 ABHD17BQ5VST6 288 aa12.92□□□□□ -0.34
TRAF3-208ENST00000560371 CHRDL2Q6WN34 429 aa12.92□□□□□ -0.34
TRAF3-208ENST00000560371 RABEPKQ7Z6M1 372 aa12.92□□□□□ -0.34
TRAF3-208ENST00000560371 KIAA1217Q5T5P2 1943 aa12.91□□□□□ -0.34
TRAF3-208ENST00000560371 TDRD6O60522 2096 aaKnown RBP12.91□□□□□ -0.34
TRAF3-208ENST00000560371 VSTM2BA6NLU5 285 aa12.91□□□□□ -0.34
TRAF3-208ENST00000560371 ARL6IP5O75915 188 aa12.91□□□□□ -0.34
TRAF3-208ENST00000560371 PRH1P02810 166 aa12.91□□□□□ -0.34
TRAF3-208ENST00000560371 CEBPBP17676 345 aa12.91□□□□□ -0.34
TRAF3-208ENST00000560371 PXNP49023 591 aaPredicted RBP12.91□□□□□ -0.34
TRAF3-208ENST00000560371 ALG10Q5BKT4 473 aa12.91□□□□□ -0.34
TRAF3-208ENST00000560371 NXPE4Q6UWF7 544 aa12.91□□□□□ -0.34
TRAF3-208ENST00000560371 HUS1BQ8NHY5 278 aa12.91□□□□□ -0.34
TRAF3-208ENST00000560371 HSPBAP1Q96EW2 488 aa12.91□□□□□ -0.34
TRAF3-208ENST00000560371 TTYH1Q9H313 450 aaPredicted RBP12.91□□□□□ -0.34
TRAF3-208ENST00000560371 ADAMTS5Q9UNA0 930 aa12.91□□□□□ -0.34
TRAF3-208ENST00000560371 C5orf51A6NDU8 294 aa12.91□□□□□ -0.34
TRAF3-208ENST00000560371 ARSAP15289 507 aa12.91□□□□□ -0.34
TRAF3-208ENST00000560371 RPS3AP61247 264 aaKnown RBP12.91□□□□□ -0.34
TRAF3-208ENST00000560371 PSAPL1Q6NUJ1 521 aa12.91□□□□□ -0.34
TRAF3-208ENST00000560371 TMEM107Q6UX40 140 aa12.91□□□□□ -0.34
TRAF3-208ENST00000560371 PHTF2Q8N3S3 785 aa12.91□□□□□ -0.34
TRAF3-208ENST00000560371 DNAJA3Q96EY1 480 aa12.91□□□□□ -0.34
TRAF3-208ENST00000560371 SMURF1Q9HCE7 757 aa12.91□□□□□ -0.34
TRAF3-208ENST00000560371 ORC5O43913 435 aa12.91□□□□□ -0.34
TRAF3-208ENST00000560371 ENTPD6O75354 484 aa12.91□□□□□ -0.34
TRAF3-208ENST00000560371 ROR2Q01974 943 aaKnown RBP12.91□□□□□ -0.34
TRAF3-208ENST00000560371 ZNF613Q6PF04 617 aa12.91□□□□□ -0.34
TRAF3-208ENST00000560371 ZNF100Q8IYN0 542 aa12.91□□□□□ -0.34
TRAF3-208ENST00000560371 C15orf40Q8WUR7 153 aa12.91□□□□□ -0.34
TRAF3-208ENST00000560371 NAA11Q9BSU3 229 aaPredicted RBP12.91□□□□□ -0.34
TRAF3-208ENST00000560371 MEAF6Q9HAF1 191 aa12.91□□□□□ -0.34
TRAF3-208ENST00000560371 FBXO9Q9UK97 447 aaPredicted RBP12.91□□□□□ -0.34
TRAF3-208ENST00000560371 MEMO1Q9Y316 297 aa12.91□□□□□ -0.34
TRAF3-208ENST00000560371 GPR89AB7ZAQ6 455 aa12.91□□□□□ -0.34
TRAF3-208ENST00000560371 GPR89BP0CG08 455 aa12.91□□□□□ -0.34
TRAF3-208ENST00000560371 FIGLAQ6QHK4 219 aa12.91□□□□□ -0.34
TRAF3-208ENST00000560371 GALNT12Q8IXK2 581 aa12.91□□□□□ -0.34
TRAF3-208ENST00000560371 FANK1Q8TC84 345 aa12.91□□□□□ -0.34
TRAF3-208ENST00000560371 ASB15Q8WXK1 588 aa12.91□□□□□ -0.34
TRAF3-208ENST00000560371 HTR3EA5X5Y0 456 aa12.91□□□□□ -0.34
TRAF3-208ENST00000560371 CCNKO75909 580 aa12.91□□□□□ -0.34
TRAF3-208ENST00000560371 IL3P08700 152 aa12.91□□□□□ -0.34
TRAF3-208ENST00000560371 NUDT6P53370 316 aa12.91□□□□□ -0.34
TRAF3-208ENST00000560371 RAB39AQ14964 217 aa12.91□□□□□ -0.34
TRAF3-208ENST00000560371 TECRLQ5HYJ1 363 aa12.91□□□□□ -0.34
TRAF3-208ENST00000560371 TESCQ96BS2 214 aa12.91□□□□□ -0.34
TRAF3-208ENST00000560371 TOX2Q96NM4 488 aa12.91□□□□□ -0.34
TRAF3-208ENST00000560371 MAPKAP1Q9BPZ7 522 aa12.91□□□□□ -0.34
TRAF3-208ENST00000560371 MND1Q9BWT6 205 aa12.91□□□□□ -0.34
TRAF3-208ENST00000560371 ZBTB20Q9HC78 741 aaPredicted RBP12.91□□□□□ -0.34
TRAF3-208ENST00000560371 CNMDO75829 334 aa12.91□□□□□ -0.34
TRAF3-208ENST00000560371 S1PR4O95977 384 aa12.91□□□□□ -0.34
TRAF3-208ENST00000560371 SGCAQ16586 387 aa12.91□□□□□ -0.34
TRAF3-208ENST00000560371 C15orf39Q6ZRI6 1047 aa12.91□□□□□ -0.34
TRAF3-208ENST00000560371 UBQLNLQ8IYU4 475 aa12.91□□□□□ -0.34
TRAF3-208ENST00000560371 NSMAFQ92636 917 aa12.91□□□□□ -0.34
TRAF3-208ENST00000560371 MS4A4AQ96JQ5 239 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms