RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 SH2D5Q6ZV89 423 aa10.86□□□□□ -0.67
RABGGTA-216ENST00000560243 MILR1Q7Z6M3 343 aa10.86□□□□□ -0.67
RABGGTA-216ENST00000560243 GPR180Q86V85 440 aa10.86□□□□□ -0.67
RABGGTA-216ENST00000560243 ZCCHC7Q8N3Z6 543 aaKnown RBP10.86□□□□□ -0.67
RABGGTA-216ENST00000560243 EPS8L3Q8TE67 593 aaKnown RBP10.86□□□□□ -0.67
RABGGTA-216ENST00000560243 TRPC4APQ8TEL6 797 aa10.86□□□□□ -0.67
RABGGTA-216ENST00000560243 DOK4Q8TEW6 326 aa10.86□□□□□ -0.67
RABGGTA-216ENST00000560243 TMEM237Q96Q45 408 aa10.86□□□□□ -0.67
RABGGTA-216ENST00000560243 FRG2BQ96QU4 278 aa10.86□□□□□ -0.67
RABGGTA-216ENST00000560243 SLX1AQ9BQ83 275 aa10.86□□□□□ -0.67
RABGGTA-216ENST00000560243 UTP23Q9BRU9 249 aaKnown RBP10.86□□□□□ -0.67
RABGGTA-216ENST00000560243 C1QTNF3Q9BXJ4 246 aa10.86□□□□□ -0.67
RABGGTA-216ENST00000560243 ERVK-6Q9BXR3 956 aa10.86□□□□□ -0.67
RABGGTA-216ENST00000560243 DEFB126Q9BYW3 111 aa10.86□□□□□ -0.67
RABGGTA-216ENST00000560243 DDX31Q9H8H2 851 aaKnown RBP10.86□□□□□ -0.67
RABGGTA-216ENST00000560243 LIN28AQ9H9Z2 209 aaKnown RBP10.86□□□□□ -0.67
RABGGTA-216ENST00000560243 ADAP2Q9NPF8 381 aa10.86□□□□□ -0.67
RABGGTA-216ENST00000560243 OLAHQ9NV23 265 aa10.86□□□□□ -0.67
RABGGTA-216ENST00000560243 VTI1BQ9UEU0 232 aa10.86□□□□□ -0.67
RABGGTA-216ENST00000560243 PPIEQ9UNP9 301 aaKnown RBP10.86□□□□□ -0.67
RABGGTA-216ENST00000560243 ASB4Q9Y574 426 aa10.86□□□□□ -0.67
RABGGTA-216ENST00000560243 NAV2Q8IVL1 2488 aa10.85□□□□□ -0.67
RABGGTA-216ENST00000560243 A0A1W2PR48 441 aa10.85□□□□□ -0.67
RABGGTA-216ENST00000560243 BLACEA4D250 179 aa10.85□□□□□ -0.67
RABGGTA-216ENST00000560243 GLOD5A6NK44 160 aa10.85□□□□□ -0.67
RABGGTA-216ENST00000560243 TMEM200CA6NKL6 621 aa10.85□□□□□ -0.67
RABGGTA-216ENST00000560243 CYSRT1A8MQ03 144 aa10.85□□□□□ -0.67
RABGGTA-216ENST00000560243 PROM1O43490 865 aa10.85□□□□□ -0.67
RABGGTA-216ENST00000560243 OR4F21O95013 312 aa10.85□□□□□ -0.67
RABGGTA-216ENST00000560243 AGFG2O95081 481 aa10.85□□□□□ -0.67
RABGGTA-216ENST00000560243 DDAH2O95865 285 aa10.85□□□□□ -0.67
RABGGTA-216ENST00000560243 TDGF1P3P51864 188 aa10.85□□□□□ -0.67
RABGGTA-216ENST00000560243 VSNL1P62760 191 aa10.85□□□□□ -0.67
RABGGTA-216ENST00000560243 PHEXP78562 749 aa10.85□□□□□ -0.67
RABGGTA-216ENST00000560243 TNFRSF17Q02223 184 aa10.85□□□□□ -0.67
RABGGTA-216ENST00000560243 CLCQ05315 142 aa10.85□□□□□ -0.67
RABGGTA-216ENST00000560243 TCHHL1Q5QJ38 904 aaPredicted RBP10.85□□□□□ -0.67
RABGGTA-216ENST00000560243 ZNF678Q5SXM1 525 aa10.85□□□□□ -0.67
RABGGTA-216ENST00000560243 TTC19Q6DKK2 380 aaPredicted RBP10.85□□□□□ -0.67
RABGGTA-216ENST00000560243 MRM1Q6IN84 353 aaKnown RBP10.85□□□□□ -0.67
RABGGTA-216ENST00000560243 DGAT2L6Q6ZPD8 337 aa10.85□□□□□ -0.67
RABGGTA-216ENST00000560243 LGI4Q8N135 537 aa10.85□□□□□ -0.67
RABGGTA-216ENST00000560243 ARMC10Q8N2F6 343 aa10.85□□□□□ -0.67
RABGGTA-216ENST00000560243 BCORP1Q8N888 145 aa10.85□□□□□ -0.67
RABGGTA-216ENST00000560243 ST6GALNAC3Q8NDV1 305 aa10.85□□□□□ -0.67
RABGGTA-216ENST00000560243 OR2W6PQ8NHA6 318 aa10.85□□□□□ -0.67
RABGGTA-216ENST00000560243 SUN3Q8TAQ9 357 aa10.85□□□□□ -0.67
RABGGTA-216ENST00000560243 ACMSDQ8TDX5 336 aa10.85□□□□□ -0.67
RABGGTA-216ENST00000560243 NR4A3Q92570 626 aa10.85□□□□□ -0.67
RABGGTA-216ENST00000560243 PPWD1Q96BP3 646 aaKnown RBP10.85□□□□□ -0.67
RABGGTA-216ENST00000560243 VMP1Q96GC9 406 aa10.85□□□□□ -0.67
RABGGTA-216ENST00000560243 HBEGFQ99075 208 aa10.85□□□□□ -0.67
RABGGTA-216ENST00000560243 CCDC77Q9BR77 488 aa10.85□□□□□ -0.67
RABGGTA-216ENST00000560243 CENPKQ9BS16 269 aa10.85□□□□□ -0.67
RABGGTA-216ENST00000560243 MRPL1Q9BYD6 325 aaKnown RBP10.85□□□□□ -0.67
RABGGTA-216ENST00000560243 C12orf65Q9H3J6 166 aaKnown RBP10.85□□□□□ -0.67
RABGGTA-216ENST00000560243 RPF2Q9H7B2 306 aaKnown RBP10.85□□□□□ -0.67
RABGGTA-216ENST00000560243 PSD3Q9NYI0 1048 aa10.85□□□□□ -0.67
RABGGTA-216ENST00000560243 LRFN1Q9P244 771 aa10.85□□□□□ -0.67
RABGGTA-216ENST00000560243 ABI3Q9P2A4 366 aa10.85□□□□□ -0.67
RABGGTA-216ENST00000560243 ERRFI1Q9UJM3 462 aaPredicted RBP10.85□□□□□ -0.67
RABGGTA-216ENST00000560243 CLCA3PQ9Y6N3 262 aa10.85□□□□□ -0.67
RABGGTA-216ENST00000560243 SPACA6W5XKT8 324 aa10.85□□□□□ -0.67
RABGGTA-216ENST00000560243 A0A1W2PS29 197 aa10.84□□□□□ -0.67
RABGGTA-216ENST00000560243 ARHGAP10A1A4S6 786 aa10.84□□□□□ -0.67
RABGGTA-216ENST00000560243 C17orf105B2RV13 164 aa10.84□□□□□ -0.67
RABGGTA-216ENST00000560243 HRKO00198 91 aa10.84□□□□□ -0.67
RABGGTA-216ENST00000560243 SUPT7LO94864 414 aa10.84□□□□□ -0.67
RABGGTA-216ENST00000560243 RASAL1O95294 804 aa10.84□□□□□ -0.67
RABGGTA-216ENST00000560243 AIFM1O95831 613 aa10.84□□□□□ -0.67
RABGGTA-216ENST00000560243 OTCP00480 354 aa10.84□□□□□ -0.67
RABGGTA-216ENST00000560243 PDYNP01213 254 aa10.84□□□□□ -0.67
RABGGTA-216ENST00000560243 FAM58BPP0C7Q3 252 aa10.84□□□□□ -0.67
RABGGTA-216ENST00000560243 EDN3P14138 238 aa10.84□□□□□ -0.67
RABGGTA-216ENST00000560243 TNNI3P19429 210 aa10.84□□□□□ -0.67
RABGGTA-216ENST00000560243 TAC1P20366 129 aa10.84□□□□□ -0.67
RABGGTA-216ENST00000560243 IMPDH1P20839 514 aa10.84□□□□□ -0.67
RABGGTA-216ENST00000560243 ATP5F1P24539 256 aaPredicted RBP10.84□□□□□ -0.67
RABGGTA-216ENST00000560243 CLCN2P51788 898 aa10.84□□□□□ -0.67
RABGGTA-216ENST00000560243 PRKAA2P54646 552 aa10.84□□□□□ -0.67
RABGGTA-216ENST00000560243 KCNK10P57789 538 aa10.84□□□□□ -0.67
RABGGTA-216ENST00000560243 IGLV3-21P80748 117 aaPredicted RBP10.84□□□□□ -0.67
RABGGTA-216ENST00000560243 FOLH1Q04609 750 aa10.84□□□□□ -0.67
RABGGTA-216ENST00000560243 IFT88Q13099 833 aa10.84□□□□□ -0.67
RABGGTA-216ENST00000560243 INAQ16352 499 aa10.84□□□□□ -0.67
RABGGTA-216ENST00000560243 GGTA1PQ4G0N0 100 aa10.84□□□□□ -0.67
RABGGTA-216ENST00000560243 CYP20A1Q6UW02 462 aa10.84□□□□□ -0.67
RABGGTA-216ENST00000560243 GALNTL5Q7Z4T8 443 aa10.84□□□□□ -0.67
RABGGTA-216ENST00000560243 LCA5Q86VQ0 697 aa10.84□□□□□ -0.67
RABGGTA-216ENST00000560243 TMEM132CQ8N3T6 1108 aa10.84□□□□□ -0.67
RABGGTA-216ENST00000560243 CDYL2Q8N8U2 506 aa10.84□□□□□ -0.67
RABGGTA-216ENST00000560243 SCMH1Q96GD3 660 aa10.84□□□□□ -0.67
RABGGTA-216ENST00000560243 PSMG3-AS1Q96PY0 264 aa10.84□□□□□ -0.67
RABGGTA-216ENST00000560243 SERPINI1Q99574 410 aa10.84□□□□□ -0.67
RABGGTA-216ENST00000560243 OR8D2Q9GZM6 311 aa10.84□□□□□ -0.67
RABGGTA-216ENST00000560243 ELOVL6Q9H5J4 265 aa10.84□□□□□ -0.67
RABGGTA-216ENST00000560243 TEX10Q9NXF1 929 aaPredicted RBP10.84□□□□□ -0.67
RABGGTA-216ENST00000560243 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.84□□□□□ -0.67
RABGGTA-216ENST00000560243 PHF11Q9UIL8 331 aa10.84□□□□□ -0.67
RABGGTA-216ENST00000560243 PPT2Q9UMR5 302 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms