RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 CPN2P22792 545 aa12.32□□□□□ -0.44
SMAD3-213ENST00000560175 PPP2R1BP30154 601 aa12.32□□□□□ -0.44
SMAD3-213ENST00000560175 CLCN2P51788 898 aa12.32□□□□□ -0.44
SMAD3-213ENST00000560175 TDGF1P3P51864 188 aa12.32□□□□□ -0.44
SMAD3-213ENST00000560175 RAP1GDS1P52306 607 aa12.32□□□□□ -0.44
SMAD3-213ENST00000560175 TNFRSF17Q02223 184 aa12.32□□□□□ -0.44
SMAD3-213ENST00000560175 METTL4Q8N3J2 472 aa12.32□□□□□ -0.44
SMAD3-213ENST00000560175 FAM26EQ8N5C1 309 aa12.32□□□□□ -0.44
SMAD3-213ENST00000560175 OR8K3Q8NH51 312 aa12.32□□□□□ -0.44
SMAD3-213ENST00000560175 DNAJB8Q8NHS0 232 aa12.32□□□□□ -0.44
SMAD3-213ENST00000560175 TRPC4APQ8TEL6 797 aa12.32□□□□□ -0.44
SMAD3-213ENST00000560175 AENQ8WTP8 325 aaKnown RBP12.32□□□□□ -0.44
SMAD3-213ENST00000560175 UBLCP1Q8WVY7 318 aaPredicted RBP12.32□□□□□ -0.44
SMAD3-213ENST00000560175 DAZLQ92904 295 aaKnown RBP12.32□□□□□ -0.44
SMAD3-213ENST00000560175 VMP1Q96GC9 406 aa12.32□□□□□ -0.44
SMAD3-213ENST00000560175 CNDP1Q96KN2 507 aa12.32□□□□□ -0.44
SMAD3-213ENST00000560175 SIGLEC12Q96PQ1 595 aa12.32□□□□□ -0.44
SMAD3-213ENST00000560175 TMEM237Q96Q45 408 aa12.32□□□□□ -0.44
SMAD3-213ENST00000560175 ZNF382Q96SR6 550 aa12.32□□□□□ -0.44
SMAD3-213ENST00000560175 RPF2Q9H7B2 306 aaKnown RBP12.32□□□□□ -0.44
SMAD3-213ENST00000560175 PNO1Q9NRX1 252 aaKnown RBP12.32□□□□□ -0.44
SMAD3-213ENST00000560175 LYARQ9NX58 379 aaKnown RBP12.32□□□□□ -0.44
SMAD3-213ENST00000560175 PHF11Q9UIL8 331 aa12.32□□□□□ -0.44
SMAD3-213ENST00000560175 FBXW2Q9UKT8 454 aa12.32□□□□□ -0.44
SMAD3-213ENST00000560175 SPACA6W5XKT8 324 aa12.32□□□□□ -0.44
SMAD3-213ENST00000560175 A0A1W2PR48 441 aa12.31□□□□□ -0.44
SMAD3-213ENST00000560175 SERTM1A2A2V5 107 aa12.31□□□□□ -0.44
SMAD3-213ENST00000560175 WIPF3A6NGB9 483 aa12.31□□□□□ -0.44
SMAD3-213ENST00000560175 GABRR3A8MPY1 467 aa12.31□□□□□ -0.44
SMAD3-213ENST00000560175 FOXO6A8MYZ6 492 aa12.31□□□□□ -0.44
SMAD3-213ENST00000560175 FGF17O60258 216 aa12.31□□□□□ -0.44
SMAD3-213ENST00000560175 LDB3O75112 727 aa12.31□□□□□ -0.44
SMAD3-213ENST00000560175 SUPT7LO94864 414 aa12.31□□□□□ -0.44
SMAD3-213ENST00000560175 SLU7O95391 586 aaKnown RBP12.31□□□□□ -0.44
SMAD3-213ENST00000560175 DDAH2O95865 285 aa12.31□□□□□ -0.44
SMAD3-213ENST00000560175 F10P00742 488 aa12.31□□□□□ -0.44
SMAD3-213ENST00000560175 PROCP04070 461 aa12.31□□□□□ -0.44
SMAD3-213ENST00000560175 FAM58BPP0C7Q3 252 aa12.31□□□□□ -0.44
SMAD3-213ENST00000560175 EDN3P14138 238 aa12.31□□□□□ -0.44
SMAD3-213ENST00000560175 TPP2P29144 1249 aaPredicted RBP12.31□□□□□ -0.44
SMAD3-213ENST00000560175 GALNSP34059 522 aa12.31□□□□□ -0.44
SMAD3-213ENST00000560175 CCT5P48643 541 aa12.31□□□□□ -0.44
SMAD3-213ENST00000560175 NAA20P61599 178 aa12.31□□□□□ -0.44
SMAD3-213ENST00000560175 TBL3Q12788 808 aaKnown RBP12.31□□□□□ -0.44
SMAD3-213ENST00000560175 IFT88Q13099 833 aa12.31□□□□□ -0.44
SMAD3-213ENST00000560175 MRPL49Q13405 166 aaKnown RBP12.31□□□□□ -0.44
SMAD3-213ENST00000560175 NR6A1Q15406 480 aa12.31□□□□□ -0.44
SMAD3-213ENST00000560175 ZNF468Q5VIY5 522 aaPredicted RBP12.31□□□□□ -0.44
SMAD3-213ENST00000560175 C18orf63Q68DL7 685 aa12.31□□□□□ -0.44
SMAD3-213ENST00000560175 OR14A16Q8NHC5 309 aa12.31□□□□□ -0.44
SMAD3-213ENST00000560175 MTFMTQ96DP5 389 aaKnown RBP12.31□□□□□ -0.44
SMAD3-213ENST00000560175 CCDC126Q96EE4 140 aa12.31□□□□□ -0.44
SMAD3-213ENST00000560175 UTP23Q9BRU9 249 aaKnown RBP12.31□□□□□ -0.44
SMAD3-213ENST00000560175 DEFB126Q9BYW3 111 aa12.31□□□□□ -0.44
SMAD3-213ENST00000560175 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.31□□□□□ -0.449e-7■■■□□ 14.7
SMAD3-213ENST00000560175 GSTO2Q9H4Y5 243 aa12.31□□□□□ -0.44
SMAD3-213ENST00000560175 ABI3Q9P2A4 366 aa12.31□□□□□ -0.44
SMAD3-213ENST00000560175 GRID1Q9ULK0 1009 aa12.31□□□□□ -0.44
SMAD3-213ENST00000560175 ASPDHA6ND91 283 aa12.3□□□□□ -0.44
SMAD3-213ENST00000560175 PRKNO60260 465 aaPredicted RBP12.3□□□□□ -0.44
SMAD3-213ENST00000560175 PLIN3O60664 434 aa12.3□□□□□ -0.44
SMAD3-213ENST00000560175 OR4F21O95013 312 aa12.3□□□□□ -0.44
SMAD3-213ENST00000560175 GPR75O95800 540 aa12.3□□□□□ -0.44
SMAD3-213ENST00000560175 MLYCDO95822 493 aa12.3□□□□□ -0.44
SMAD3-213ENST00000560175 PDYNP01213 254 aa12.3□□□□□ -0.44
SMAD3-213ENST00000560175 IGKV3-11P04433 115 aa12.3□□□□□ -0.44
SMAD3-213ENST00000560175 HSD3B1P14060 373 aa12.3□□□□□ -0.44
SMAD3-213ENST00000560175 TSPAN8P19075 237 aa12.3□□□□□ -0.44
SMAD3-213ENST00000560175 HSD3B2P26439 372 aa12.3□□□□□ -0.44
SMAD3-213ENST00000560175 TLX1P31314 330 aaPredicted RBP12.3□□□□□ -0.44
SMAD3-213ENST00000560175 STT3AP46977 705 aa12.3□□□□□ -0.44
SMAD3-213ENST00000560175 HLCSP50747 726 aa12.3□□□□□ -0.44
SMAD3-213ENST00000560175 DNAJB13P59910 316 aa12.3□□□□□ -0.44
SMAD3-213ENST00000560175 GALNT1Q10472 559 aaPredicted RBP12.3□□□□□ -0.44
SMAD3-213ENST00000560175 STX4Q12846 297 aa12.3□□□□□ -0.44
SMAD3-213ENST00000560175 OR1C1Q15619 314 aa12.3□□□□□ -0.44
SMAD3-213ENST00000560175 EIF2S3LQ2VIR3 472 aaKnown RBP12.3□□□□□ -0.44
SMAD3-213ENST00000560175 CCDC153Q494R4 210 aa12.3□□□□□ -0.44
SMAD3-213ENST00000560175 ZNF766Q5HY98 468 aa12.3□□□□□ -0.44
SMAD3-213ENST00000560175 SPINK14Q6IE38 97 aa12.3□□□□□ -0.44
SMAD3-213ENST00000560175 EMBQ6PCB8 327 aa12.3□□□□□ -0.44
SMAD3-213ENST00000560175 ZYG11AQ6WRX3 759 aa12.3□□□□□ -0.44
SMAD3-213ENST00000560175 CLNKQ7Z7G1 428 aa12.3□□□□□ -0.44
SMAD3-213ENST00000560175 NUDT13Q86X67 352 aa12.3□□□□□ -0.44
SMAD3-213ENST00000560175 RIBC1Q8N443 379 aaPredicted RBP12.3□□□□□ -0.44
SMAD3-213ENST00000560175 BCORP1Q8N888 145 aa12.3□□□□□ -0.44
SMAD3-213ENST00000560175 SUN3Q8TAQ9 357 aa12.3□□□□□ -0.44
SMAD3-213ENST00000560175 RDH11Q8TC12 318 aa12.3□□□□□ -0.44
SMAD3-213ENST00000560175 EPS8L3Q8TE67 593 aaKnown RBP12.3□□□□□ -0.44
SMAD3-213ENST00000560175 ZNF721Q8TF20 911 aa12.3□□□□□ -0.44
SMAD3-213ENST00000560175 NR4A3Q92570 626 aa12.3□□□□□ -0.44
SMAD3-213ENST00000560175 CAVIN3Q969G5 261 aa12.3□□□□□ -0.44
SMAD3-213ENST00000560175 NCLNQ969V3 563 aa12.3□□□□□ -0.44
SMAD3-213ENST00000560175 C11orf24Q96F05 449 aaPredicted RBP12.3□□□□□ -0.44
SMAD3-213ENST00000560175 ROPN1BQ9BZX4 212 aaPredicted RBP12.3□□□□□ -0.44
SMAD3-213ENST00000560175 ELOVL6Q9H5J4 265 aa12.3□□□□□ -0.44
SMAD3-213ENST00000560175 ROPN1Q9HAT0 212 aaPredicted RBP12.3□□□□□ -0.44
SMAD3-213ENST00000560175 FARSBQ9NSD9 589 aaKnown RBP12.3□□□□□ -0.44
SMAD3-213ENST00000560175 MKS1Q9NXB0 559 aa12.3□□□□□ -0.44
SMAD3-213ENST00000560175 AHSPQ9NZD4 102 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms