RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 LRFN2Q9ULH4 789 aa18.32■□□□□ 0.52
SEMA4B-215ENST00000560089 PIN4Q9Y237 131 aaKnown RBP18.32■□□□□ 0.52
SEMA4B-215ENST00000560089 SLC6A5Q9Y345 797 aa18.32■□□□□ 0.52
SEMA4B-215ENST00000560089 Q9Y3F1 56 aa18.32■□□□□ 0.52
SEMA4B-215ENST00000560089 WISP3O95389 354 aaPredicted RBP18.31■□□□□ 0.52
SEMA4B-215ENST00000560089 POU3F2P20265 443 aaPredicted RBP18.31■□□□□ 0.52
SEMA4B-215ENST00000560089 AKAP5P24588 427 aa18.31■□□□□ 0.52
SEMA4B-215ENST00000560089 PIK3CGP48736 1102 aa18.31■□□□□ 0.52
SEMA4B-215ENST00000560089 SULT1E1P49888 294 aa18.31■□□□□ 0.52
SEMA4B-215ENST00000560089 PRMT2P55345 433 aa18.31■□□□□ 0.52
SEMA4B-215ENST00000560089 ZNF528Q3MIS6 628 aa18.31■□□□□ 0.52
SEMA4B-215ENST00000560089 PLA1AQ53H76 456 aa18.31■□□□□ 0.52
SEMA4B-215ENST00000560089 FAM198BQ6UWH4 519 aa18.31■□□□□ 0.52
SEMA4B-215ENST00000560089 TRMT11Q7Z4G4 463 aaKnown RBP18.31■□□□□ 0.52
SEMA4B-215ENST00000560089 C1orf127Q8N9H9 656 aa18.31■□□□□ 0.52
SEMA4B-215ENST00000560089 WDR20Q8TBZ3 569 aa18.31■□□□□ 0.52
SEMA4B-215ENST00000560089 MRPS24Q96EL2 167 aaKnown RBP18.31■□□□□ 0.52
SEMA4B-215ENST00000560089 HBEGFQ99075 208 aa18.31■□□□□ 0.52
SEMA4B-215ENST00000560089 SOSTQ9BQB4 213 aa18.31■□□□□ 0.52
SEMA4B-215ENST00000560089 MEIKINA0A087WXM9 373 aa18.31■□□□□ 0.52
SEMA4B-215ENST00000560089 FFAR3O14843 346 aa18.31■□□□□ 0.52
SEMA4B-215ENST00000560089 GPR42O15529 346 aa18.31■□□□□ 0.52
SEMA4B-215ENST00000560089 RASGRP1O95267 797 aa18.31■□□□□ 0.52
SEMA4B-215ENST00000560089 CCNDBP1O95273 360 aa18.31■□□□□ 0.52
SEMA4B-215ENST00000560089 HBQ1P09105 142 aa18.31■□□□□ 0.52
SEMA4B-215ENST00000560089 ALDH9A1P49189 494 aa18.31■□□□□ 0.52
SEMA4B-215ENST00000560089 CAPZA1P52907 286 aa18.31■□□□□ 0.52
SEMA4B-215ENST00000560089 SNX16P57768 344 aa18.31■□□□□ 0.52
SEMA4B-215ENST00000560089 TSPAN5P62079 268 aa18.31■□□□□ 0.52
SEMA4B-215ENST00000560089 SPHARQ15513 63 aa18.31■□□□□ 0.52
SEMA4B-215ENST00000560089 SLC10A6Q3KNW5 377 aa18.31■□□□□ 0.52
SEMA4B-215ENST00000560089 CALHM3Q86XJ0 350 aa18.31■□□□□ 0.52
SEMA4B-215ENST00000560089 ZDHHC17Q8IUH5 632 aa18.31■□□□□ 0.52
SEMA4B-215ENST00000560089 ZNF454Q8N9F8 522 aa18.31■□□□□ 0.52
SEMA4B-215ENST00000560089 UXS1Q8NBZ7 420 aa18.31■□□□□ 0.52
SEMA4B-215ENST00000560089 PHOSPHO2Q8TCD6 241 aa18.31■□□□□ 0.52
SEMA4B-215ENST00000560089 OR2M2Q96R28 347 aa18.31■□□□□ 0.52
SEMA4B-215ENST00000560089 PTDSS2Q9BVG9 487 aa18.31■□□□□ 0.52
SEMA4B-215ENST00000560089 NDUFB11Q9NX14 153 aa18.31■□□□□ 0.52
SEMA4B-215ENST00000560089 CNOT2Q9NZN8 540 aaKnown RBP18.31■□□□□ 0.52
SEMA4B-215ENST00000560089 KLK14Q9P0G3 267 aa18.31■□□□□ 0.52
SEMA4B-215ENST00000560089 ZNF225Q9UK10 706 aa18.31■□□□□ 0.52
SEMA4B-215ENST00000560089 SHROOM3Q8TF72 1996 aa18.31■□□□□ 0.52
SEMA4B-215ENST00000560089 LCP1P13796 627 aa18.31■□□□□ 0.52
SEMA4B-215ENST00000560089 CTPS1P17812 591 aa18.31■□□□□ 0.52
SEMA4B-215ENST00000560089 ITGB8P26012 769 aa18.31■□□□□ 0.52
SEMA4B-215ENST00000560089 KIAA0040Q15053 153 aa18.31■□□□□ 0.52
SEMA4B-215ENST00000560089 NR6A1Q15406 480 aa18.31■□□□□ 0.52
SEMA4B-215ENST00000560089 USP39Q53GS9 565 aaKnown RBP18.31■□□□□ 0.52
SEMA4B-215ENST00000560089 RTP2Q5QGT7 225 aa18.31■□□□□ 0.52
SEMA4B-215ENST00000560089 LIPKQ5VXJ0 399 aa18.31■□□□□ 0.52
SEMA4B-215ENST00000560089 SLC25A25Q6KCM7 469 aa18.31■□□□□ 0.52
SEMA4B-215ENST00000560089 METAP1DQ6UB28 335 aaPredicted RBP18.31■□□□□ 0.52
SEMA4B-215ENST00000560089 ASB18Q6ZVZ8 466 aa18.31■□□□□ 0.52
SEMA4B-215ENST00000560089 SHFQ7M4L6 423 aa18.31■□□□□ 0.52
SEMA4B-215ENST00000560089 KDELC2Q7Z4H8 507 aa18.31■□□□□ 0.52
SEMA4B-215ENST00000560089 NXF3Q9H4D5 531 aaKnown RBP18.31■□□□□ 0.52
SEMA4B-215ENST00000560089 HCN2Q9UL51 889 aa18.31■□□□□ 0.52
SEMA4B-215ENST00000560089 ASB4Q9Y574 426 aa18.31■□□□□ 0.52
SEMA4B-215ENST00000560089 E2F3O00716 465 aa18.3■□□□□ 0.52
SEMA4B-215ENST00000560089 GPR171O14626 319 aa18.3■□□□□ 0.52
SEMA4B-215ENST00000560089 CSO75390 466 aaKnown RBP18.3■□□□□ 0.52
SEMA4B-215ENST00000560089 CAV3P56539 151 aa18.3■□□□□ 0.52
SEMA4B-215ENST00000560089 FAM187BQ17R55 369 aa18.3■□□□□ 0.52
SEMA4B-215ENST00000560089 WASH2PQ6VEQ5 465 aa18.3■□□□□ 0.52
SEMA4B-215ENST00000560089 KRT74Q7RTS7 529 aa18.3■□□□□ 0.52
SEMA4B-215ENST00000560089 C12orf40Q86WS4 652 aa18.3■□□□□ 0.52
SEMA4B-215ENST00000560089 C12orf45Q8N5I9 185 aaPredicted RBP18.3■□□□□ 0.52
SEMA4B-215ENST00000560089 TBC1D19Q8N5T2 526 aa18.3■□□□□ 0.52
SEMA4B-215ENST00000560089 SARGQ9BW04 601 aa18.3■□□□□ 0.52
SEMA4B-215ENST00000560089 NT5C1AQ9BXI3 368 aa18.3■□□□□ 0.52
SEMA4B-215ENST00000560089 SLC6A14Q9UN76 642 aa18.3■□□□□ 0.52
SEMA4B-215ENST00000560089 RNF224P0DH78 156 aa18.3■□□□□ 0.52
SEMA4B-215ENST00000560089 CHRNA4P43681 627 aa18.3■□□□□ 0.52
SEMA4B-215ENST00000560089 HSPA7P48741 367 aa18.3■□□□□ 0.52
SEMA4B-215ENST00000560089 ITGA1P56199 1179 aa18.3■□□□□ 0.52
SEMA4B-215ENST00000560089 ALKAL2Q6UX46 152 aa18.3■□□□□ 0.52
SEMA4B-215ENST00000560089 TMEM203Q969S6 136 aa18.3■□□□□ 0.52
SEMA4B-215ENST00000560089 ATOH8Q96SQ7 321 aa18.3■□□□□ 0.52
SEMA4B-215ENST00000560089 PAPOLGQ9BWT3 736 aaKnown RBP18.3■□□□□ 0.52
SEMA4B-215ENST00000560089 POLR2J2Q9GZM3 115 aaKnown RBP18.3■□□□□ 0.52
SEMA4B-215ENST00000560089 EQTNQ9NQ60 294 aa18.3■□□□□ 0.52
SEMA4B-215ENST00000560089 RGS18Q9NS28 235 aa18.3■□□□□ 0.52
SEMA4B-215ENST00000560089 CLEC2DQ9UHP7 191 aa18.3■□□□□ 0.52
SEMA4B-215ENST00000560089 CLCA2Q9UQC9 943 aa18.3■□□□□ 0.52
SEMA4B-215ENST00000560089 AAR2Q9Y312 384 aaKnown RBP18.3■□□□□ 0.52
SEMA4B-215ENST00000560089 TPST2O60704 377 aa18.29■□□□□ 0.52
SEMA4B-215ENST00000560089 S100PP25815 95 aa18.29■□□□□ 0.52
SEMA4B-215ENST00000560089 KCNJ3P48549 501 aa18.29■□□□□ 0.52
SEMA4B-215ENST00000560089 SERTAD2Q14140 314 aa18.29■□□□□ 0.52
SEMA4B-215ENST00000560089 ZNF730Q6ZMV8 503 aa18.29■□□□□ 0.52
SEMA4B-215ENST00000560089 CCDC117Q8IWD4 279 aaPredicted RBP18.29■□□□□ 0.52
SEMA4B-215ENST00000560089 NPWQ8N729 165 aa18.29■□□□□ 0.52
SEMA4B-215ENST00000560089 C2CD4CQ8TF44 421 aa18.29■□□□□ 0.52
SEMA4B-215ENST00000560089 SLC35F5Q8WV83 523 aa18.29■□□□□ 0.52
SEMA4B-215ENST00000560089 FEVQ99581 238 aa18.29■□□□□ 0.52
SEMA4B-215ENST00000560089 CRB3Q9BUF7 120 aa18.29■□□□□ 0.52
SEMA4B-215ENST00000560089 PDCD10Q9BUL8 212 aa18.29■□□□□ 0.52
SEMA4B-215ENST00000560089 OR51M1Q9H341 326 aa18.29■□□□□ 0.52
SEMA4B-215ENST00000560089 SLC6A13Q9NSD5 602 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms