RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 TAS2R50P59544 299 aa10.22□□□□□ -0.77
TPM1-217ENST00000559108 IGLV3-21P80748 117 aaPredicted RBP10.22□□□□□ -0.77
TPM1-217ENST00000559108 TGM3Q08188 693 aa10.22□□□□□ -0.77
TPM1-217ENST00000559108 ACSM2AQ08AH3 577 aa10.22□□□□□ -0.77
TPM1-217ENST00000559108 IMPG1Q17R60 797 aa10.22□□□□□ -0.77
TPM1-217ENST00000559108 DEFB109BQ30KR1 87 aa10.22□□□□□ -0.77
TPM1-217ENST00000559108 LINC00303Q3SY05 128 aa10.22□□□□□ -0.77
TPM1-217ENST00000559108 SLC9B1Q4ZJI4 515 aa10.22□□□□□ -0.77
TPM1-217ENST00000559108 NDUFAF5Q5TEU4 345 aa10.22□□□□□ -0.77
TPM1-217ENST00000559108 MFSD4BQ5TF39 518 aa10.22□□□□□ -0.77
TPM1-217ENST00000559108 ACSM2BQ68CK6 577 aa10.22□□□□□ -0.77
TPM1-217ENST00000559108 QSOX2Q6ZRP7 698 aa10.22□□□□□ -0.77
TPM1-217ENST00000559108 PLPP5Q8NEB5 264 aa10.22□□□□□ -0.77
TPM1-217ENST00000559108 DNAJB14Q8TBM8 379 aa10.22□□□□□ -0.77
TPM1-217ENST00000559108 LRRC8CQ8TDW0 803 aa10.22□□□□□ -0.77
TPM1-217ENST00000559108 SREK1Q8WXA9 508 aaKnown RBP10.22□□□□□ -0.77
TPM1-217ENST00000559108 THOC1Q96FV9 657 aaKnown RBP10.22□□□□□ -0.77
TPM1-217ENST00000559108 C7orf26Q96N11 449 aa10.22□□□□□ -0.77
TPM1-217ENST00000559108 OR52B2Q96RD2 323 aa10.22□□□□□ -0.77
TPM1-217ENST00000559108 EBF4Q9BQW3 602 aa10.22□□□□□ -0.77
TPM1-217ENST00000559108 AKTIPQ9H8T0 292 aa10.22□□□□□ -0.77
TPM1-217ENST00000559108 MEAF6Q9HAF1 191 aa10.22□□□□□ -0.77
TPM1-217ENST00000559108 CLK4Q9HAZ1 481 aaKnown RBP10.22□□□□□ -0.77
TPM1-217ENST00000559108 PRDM9Q9NQV7 894 aa10.22□□□□□ -0.77
TPM1-217ENST00000559108 PRTFDC1Q9NRG1 225 aa10.22□□□□□ -0.77
TPM1-217ENST00000559108 SEMA3GQ9NS98 782 aa10.22□□□□□ -0.77
TPM1-217ENST00000559108 C1orf109Q9NX04 203 aa10.22□□□□□ -0.77
TPM1-217ENST00000559108 LYARQ9NX58 379 aaKnown RBP10.22□□□□□ -0.77
TPM1-217ENST00000559108 P4HTMQ9NXG6 502 aa10.22□□□□□ -0.77
TPM1-217ENST00000559108 BAIAP2L1Q9UHR4 511 aa10.22□□□□□ -0.77
TPM1-217ENST00000559108 FBXL4Q9UKA2 621 aa10.22□□□□□ -0.77
TPM1-217ENST00000559108 NXT1Q9UKK6 140 aaKnown RBP10.22□□□□□ -0.77
TPM1-217ENST00000559108 IGHV1-45A0A0A0MS14 117 aa10.21□□□□□ -0.77
TPM1-217ENST00000559108 GOLGA8QA0A0J9YX86 632 aa10.21□□□□□ -0.77
TPM1-217ENST00000559108 GOLGA8OA6NCC3 632 aa10.21□□□□□ -0.77
TPM1-217ENST00000559108 A8MUA0 341 aa10.21□□□□□ -0.77
TPM1-217ENST00000559108 GOLGA8NF8WBI6 632 aa10.21□□□□□ -0.77
TPM1-217ENST00000559108 K7EM74 188 aa10.21□□□□□ -0.77
TPM1-217ENST00000559108 HRKO00198 91 aa10.21□□□□□ -0.77
TPM1-217ENST00000559108 SLC28A1O00337 649 aa10.21□□□□□ -0.77
TPM1-217ENST00000559108 RGS14O43566 566 aa10.21□□□□□ -0.77
TPM1-217ENST00000559108 PRMT3O60678 531 aa10.21□□□□□ -0.77
TPM1-217ENST00000559108 SEC22BO75396 215 aa10.21□□□□□ -0.77
TPM1-217ENST00000559108 SEC24DO94855 1032 aaPredicted RBP10.21□□□□□ -0.77
TPM1-217ENST00000559108 ANXA4P09525 319 aaPredicted RBP10.21□□□□□ -0.77
TPM1-217ENST00000559108 C8orf89P0DMQ9 161 aa10.21□□□□□ -0.77
TPM1-217ENST00000559108 NR2F6P10588 404 aa10.21□□□□□ -0.77
TPM1-217ENST00000559108 BCKDHAP12694 445 aa10.21□□□□□ -0.77
TPM1-217ENST00000559108 EPHA3P29320 983 aa10.21□□□□□ -0.77
TPM1-217ENST00000559108 DIO3P55073 304 aa10.21□□□□□ -0.77
TPM1-217ENST00000559108 FOLH1Q04609 750 aa10.21□□□□□ -0.77
TPM1-217ENST00000559108 SSPNQ14714 243 aa10.21□□□□□ -0.77
TPM1-217ENST00000559108 PTGR1Q14914 329 aa10.21□□□□□ -0.77
TPM1-217ENST00000559108 TBR1Q16650 682 aa10.21□□□□□ -0.77
TPM1-217ENST00000559108 MPEG1Q2M385 716 aa10.21□□□□□ -0.77
TPM1-217ENST00000559108 CRTC2Q53ET0 693 aaPredicted RBP10.21□□□□□ -0.77
TPM1-217ENST00000559108 ZNF385BQ569K4 471 aa10.21□□□□□ -0.77
TPM1-217ENST00000559108 SPIN4Q56A73 249 aa10.21□□□□□ -0.77
TPM1-217ENST00000559108 SFT2D3Q587I9 215 aa10.21□□□□□ -0.77
TPM1-217ENST00000559108 BROXQ5VW32 411 aa10.21□□□□□ -0.77
TPM1-217ENST00000559108 ATG16L1Q676U5 607 aa10.21□□□□□ -0.77
TPM1-217ENST00000559108 FAM71E1Q6IPT2 247 aa10.21□□□□□ -0.77
TPM1-217ENST00000559108 ANKRD26P1Q6NSI1 321 aa10.21□□□□□ -0.77
TPM1-217ENST00000559108 NIPAL1Q6NVV3 410 aa10.21□□□□□ -0.77
TPM1-217ENST00000559108 CYP20A1Q6UW02 462 aa10.21□□□□□ -0.77
TPM1-217ENST00000559108 LARP4Q71RC2 724 aaKnown RBP eCLIP10.21□□□□□ -0.77
TPM1-217ENST00000559108 TRIM42Q8IWZ5 723 aa10.21□□□□□ -0.77
TPM1-217ENST00000559108 ZNF595Q8IYB9 648 aa10.21□□□□□ -0.77
TPM1-217ENST00000559108 ZNF321PQ8N8H1 164 aa10.21□□□□□ -0.77
TPM1-217ENST00000559108 SIMC1Q8NDZ2 872 aa10.21□□□□□ -0.77
TPM1-217ENST00000559108 NFAM1Q8NET5 270 aaPredicted RBP10.21□□□□□ -0.77
TPM1-217ENST00000559108 TTC9Q92623 222 aa10.21□□□□□ -0.77
TPM1-217ENST00000559108 EXTL1Q92935 676 aa10.21□□□□□ -0.77
TPM1-217ENST00000559108 MAELQ96JY0 434 aaKnown RBP10.21□□□□□ -0.77
TPM1-217ENST00000559108 IMMP1LQ96LU5 166 aa10.21□□□□□ -0.77
TPM1-217ENST00000559108 PTCHD1Q96NR3 888 aa10.21□□□□□ -0.77
TPM1-217ENST00000559108 CENPKQ9BS16 269 aa10.21□□□□□ -0.77
TPM1-217ENST00000559108 FAM117AQ9C073 453 aa10.21□□□□□ -0.77
TPM1-217ENST00000559108 ROGDIQ9GZN7 287 aa10.21□□□□□ -0.77
TPM1-217ENST00000559108 RPF2Q9H7B2 306 aaKnown RBP10.21□□□□□ -0.77
TPM1-217ENST00000559108 SLAMF7Q9NQ25 335 aa10.21□□□□□ -0.77
TPM1-217ENST00000559108 ZNF223Q9UK11 482 aaPredicted RBP10.21□□□□□ -0.77
TPM1-217ENST00000559108 PCDHA9Q9Y5H5 950 aa10.21□□□□□ -0.77
TPM1-217ENST00000559108 KCNMB2Q9Y691 235 aa10.21□□□□□ -0.77
TPM1-217ENST00000559108 NBEAQ8NFP9 2946 aa10.2□□□□□ -0.78
TPM1-217ENST00000559108 A0A088AWK7 358 aa10.2□□□□□ -0.78
TPM1-217ENST00000559108 GNG14A0A1W2PPG7 69 aa10.2□□□□□ -0.78
TPM1-217ENST00000559108 PSMD12O00232 456 aaPredicted RBP10.2□□□□□ -0.78
TPM1-217ENST00000559108 ANKRD28O15084 1053 aa10.2□□□□□ -0.78
TPM1-217ENST00000559108 HDAC3O15379 428 aa10.2□□□□□ -0.78
TPM1-217ENST00000559108 EDF1O60869 148 aaKnown RBP10.2□□□□□ -0.78
TPM1-217ENST00000559108 CTNSO60931 367 aa10.2□□□□□ -0.78
TPM1-217ENST00000559108 LRATO95237 230 aa10.2□□□□□ -0.78
TPM1-217ENST00000559108 CHEK2O96017 543 aa10.2□□□□□ -0.78
TPM1-217ENST00000559108 PDGFAP04085 211 aa10.2□□□□□ -0.78
TPM1-217ENST00000559108 ACPPP15309 386 aa10.2□□□□□ -0.78
TPM1-217ENST00000559108 ALOX15P16050 662 aaPredicted RBP10.2□□□□□ -0.78
TPM1-217ENST00000559108 ZNF10P21506 573 aaPredicted RBP10.2□□□□□ -0.78
TPM1-217ENST00000559108 IL10P22301 178 aa10.2□□□□□ -0.78
TPM1-217ENST00000559108 JAK1P23458 1154 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms